version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1442 31.20 0 1700121..1700918 - 265 18310424 nirC CPE1442 - nitrite transporter 1443 23.35 -1 1701126..1701746 - 206 18310425 - CPE1443 - hypothetical protein 1444 25.89 0 1701724..1702005 - 93 18310426 - CPE1444 - GIY-YIG domain protein 1445 27.22 0 1702268..1704328 + 686 18310427 - CPE1445 - AraC family transcriptional regulator 1446 24.88 -1 1704792..1706057 - 421 18310428 - CPE1446 - hypothetical protein 1447 24.17 -1 1706074..1706826 - 250 18310429 - CPE1447 - hypothetical protein 1448 27.84 0 1706848..1707375 - 175 18310430 - CPE1448 - transcriptional regulator 1449 38.27 +2 1707673..1707834 - 53 18310431 - CPE1449 - hypothetical protein 1450 29.84 0 1707913..1708542 - 209 18310432 - CPE1450 - ribonuclease H-related protein 1451 26.75 0 1708558..1709529 - 323 18310433 - CPE1451 - hypothetical protein 1452 28.18 0 1709642..1710670 - 342 18310434 - CPE1452 - rhomboid family protein 1453 28.22 0 1710688..1712487 - 599 18310435 pepF CPE1453 - oligoendopeptidase F 1454 28.57 0 1712508..1712906 - 132 18310436 - CPE1454 - hypothetical protein 1455 23.51 -1 1713075..1713410 + 111 18310437 - CPE1455 - hypothetical protein 1456 26.01 0 1713483..1714151 + 222 18310438 - CPE1456 - ABC transporter 1457 27.53 0 1714170..1714979 + 269 18310439 - CPE1457 - ABC transporter 1458 18.89 -2 1714974..1715153 - 59 18310440 - CPE1458 - hypothetical protein 1459 31.18 0 1715138..1716529 - 463 18310441 - CPE1459 - hypothetical protein 1460 27.63 0 1716808..1718226 - 472 18310442 - CPE1460 - hypothetical protein 1461 32.68 +1 1718309..1719232 - 307 18310443 - CPE1461 - hypothetical protein 1462 25.55 -1 1719499..1719909 - 136 18310444 furR CPE1462 - FUR family transcriptional regulator 1463 31.52 0 1720201..1721028 - 275 18310445 - CPE1463 - PTS system protein 1464 36.18 +2 1721028..1721834 - 268 18310446 - CPE1464 - PTS system protein 1465 31.12 0 1721989..1722486 - 165 18310447 - CPE1465 - PTS system protein 1466 32.14 0 1722641..1723060 - 139 18310448 - CPE1466 - PTS system protein 1467 29.93 0 1723470..1724672 + 400 18310449 pfk CPE1467 - 6-phosphofructokinase 1468 31.97 0 1724731..1725096 - 121 18310450 - CPE1468 - hypothetical protein 1469 28.75 0 1725353..1726639 - 428 18310451 - CPE1469 - aminotransferase, class V 1470 29.81 0 1726809..1728740 + 643 18310452 - CPE1470 - prbable ABC transporter 1471 33.55 +1 1728905..1729369 - 154 18310453 dut CPE1471 - deoxyuridine 5'-triphosphate nucleotidohydrolase 1472 31.64 0 1729504..1730094 - 196 18310454 - CPE1472 - hypothetical protein 1473 22.52 -1 1730180..1730734 - 184 18310455 - CPE1473 - hypothetical protein 1474 27.93 0 1730973..1731620 + 215 18310456 hlyC CPE1474 - hemolysin III 1475 26.33 0 1731671..1732555 - 294 18310457 - CPE1475 - LysR family transcriptional regulator 1476 26.67 0 1732567..1732851 - 94 18310458 - CPE1476 - hypothetical protein 1477 29.29 0 1733027..1733743 + 238 18310459 - CPE1477 - polysaccharide deacetylase family protein 1478 25.14 -1 1733760..1734296 - 178 18310460 - CPE1478 - hypothetical protein 1479 27.83 0 1734415..1735050 - 211 18310461 - CPE1479 - hypothetical protein 1480 30.07 0 1735270..1736925 + 551 18310462 - CPE1480 - sulfate permease, SulP family 1481 26.80 0 1736966..1737118 - 50 18310463 - CPE1481 - hypothetical protein 1482 31.99 0 1737195..1738160 - 321 18310464 - CPE1482 - sugar kinase 1483 26.15 0 1738200..1738394 - 64 18310465 - CPE1483 - hypothetical protein 1484 28.29 0 1738652..1739980 - 442 18310466 - CPE1484 - MATE efflux family protein 1485 26.20 0 1740001..1740687 - 228 18310467 - CPE1485 - ABC transporter 1486 25.93 0 1740689..1741444 - 251 18310468 - CPE1486 - ABC transporter 1487 29.75 0 1741419..1742423 - 334 18310469 - CPE1487 - hypothetical protein 1488 26.34 0 1742670..1742855 - 61 18310470 - CPE1488 - hypothetical protein 1489 29.95 0 1743060..1743917 - 285 18310471 - CPE1489 - hypothetical protein 1490 27.54 0 1744021..1744797 - 258 18310472 - CPE1490 - hypothetical protein 1491 24.59 -1 1745032..1745454 + 140 18310473 - CPE1491 - hypothetical protein 1492 30.29 0 1745657..1746181 - 174 18310474 - CPE1492 - hypothetical protein 1493 29.02 0 1746252..1746761 - 169 18310475 - CPE1493 - hypothetical protein 1494 29.26 0 1747023..1747856 - 277 18310476 - CPE1494 - PP-loop family protein 1495 30.59 0 1747807..1748061 - 84 18310477 - CPE1495 - hypothetical protein 1496 26.30 0 1748260..1748529 + 89 18310478 - CPE1496 - hypothetical protein 1497 34.74 +1 1748546..1749898 + 450 18310479 - CPE1497 - hypothetical protein 1498 27.38 0 1750111..1750614 - 167 18310480 - CPE1498 - hypothetical protein 1499 30.94 0 1750939..1751814 - 291 18310481 comEC CPE1499 - late competence protein 1500 22.15 -2 1751985..1753307 - 440 18310482 virS CPE1500 - sensor histidine kinase VirS 1501 25.88 0 1753301..1754011 - 236 18310483 virR CPE1501 - DNA-binding response regulator, LytTr family 1502 31.07 0 1754150..1755163 - 337 18310484 - CPE1502 - hypothetical protein 1503 31.25 0 1755260..1755547 - 95 18310485 - CPE1503 - hypothetical protein 1504 32.45 0 1755771..1756784 - 337 18310486 - CPE1504 - hypothetical protein 1505 31.79 0 1757210..1758508 - 432 18310487 uraA CPE1505 - uracil transporter 1506 32.26 0 1758696..1760279 + 527 18310488 - CPE1506 - ABC transporter 1507 29.39 0 1760330..1761292 - 320 18310489 - CPE1507 - endo-1,4-beta-xylanase 1508 30.18 0 1761676..1763862 - 728 18310490 topB CPE1508 - DNA topoisomerase III 1509 24.95 -1 1763959..1765377 - 472 18310491 - CPE1509 - hypothetical protein 1510 21.37 -2 1765387..1765854 - 155 18310492 - CPE1510 - hypothetical protein 1511 22.56 -1 1766269..1766667 - 132 18310493 - CPE1511 - hypothetical protein 1512 28.43 0 1766875..1770156 - 1093 18310494 - CPE1512 - sensor histidine kinase/response regulator 1513 24.07 -1 1770238..1771338 - 366 18310495 - CPE1513 - hypothetical protein 1514 25.00 -1 1771353..1772720 - 455 18310496 argI CPE1514 - AlgI-related protein 1515 31.93 0 1772948..1773445 - 165 18310497 - CPE1515 - putative lipoprotein 1516 28.02 0 1773697..1774920 - 407 18310498 - CPE1516 - ATP-dependent RNA helicase, DEAD/DEAH box family 1517 24.04 -1 1774938..1775249 - 103 18310499 - CPE1517 - hypothetical protein 1518 32.74 +1 1775558..1776904 - 448 18310500 gdhA CPE1518 - glutamate dehydrogenase 1519 26.87 0 1777386..1777880 - 164 18310501 - CPE1519 - hypothetical protein 1520 33.82 +1 1778114..1779139 + 341 18310502 ilvE CPE1520 - branched-chain amino acid aminotransferase 1521 21.01 -2 1779183..1779596 - 137 18310503 - CPE1521 - hypothetical protein 1522 23.63 -1 1779619..1780164 - 181 18310504 - CPE1522 - hypothetical protein 1523 30.76 0 1780361..1783744 - 1127 18310505 nagL CPE1523 - hyaluronidase 1524 26.86 0 1784103..1785029 + 308 18310506 - CPE1524 - hypothetical protein 1525 29.32 0 1785150..1786919 - 589 18310507 - CPE1525 - ABC transporter 1526 28.34 0 1786954..1788675 - 573 18310508 - CPE1526 - ABC transporter 1527 25.16 -1 1789308..1790102 - 264 18310509 - CPE1527 - hypothetical protein 1528 22.78 -1 1790285..1790644 - 119 18310510 - CPE1528 - hypothetical protein 1529 27.20 0 1790912..1792249 + 445 18310511 - CPE1529 - hypothetical protein 1530 19.42 -2 1792316..1792732 - 138 18310512 - CPE1530 - hypothetical protein 1531 30.38 0 1792953..1793900 - 315 18310513 - CPE1531 - fructokinase 1532 27.87 0 1793893..1795356 - 487 18310514 sacA CPE1532 - sucrose-6-P hydrolase 1533 27.73 0 1795396..1796376 - 326 18310515 - CPE1533 - sucrose operon repressor 1534 31.71 0 1796505..1797857 - 450 18310516 - CPE1534 - PTS system, sucrose-specific IIBC component 1535 25.84 0 1798180..1798806 - 208 18310517 - CPE1535 - hypothetical protein 1536 32.38 0 1799318..1800364 - 348 18310518 asrC CPE1536 - anaerobic sulfite reductase subunit C 1537 30.68 0 1800377..1801168 - 263 18310519 asrB CPE1537 - anaerobic sulfite reductase subunit B 1538 28.49 0 1801169..1802200 - 343 18310520 asrA CPE1538 - anaerobic sulfite reductase subunit A 1539 23.84 -1 1802460..1802870 + 136 18310521 - CPE1539 - hypothetical protein 1540 30.04 0 1802968..1804152 - 394 18310522 - CPE1540 - ABC transporter 1541 29.34 0 1804139..1804840 - 233 18310523 - CPE1541 - ABC transporter 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.