version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1137 25.00 -1 1332271..1332474 + 67 18310119 - CPE1137 - hypothetical protein 1138 29.95 0 1332512..1333426 + 304 18310120 - CPE1138 - hypothetical protein 1139 27.80 0 1334196..1334990 - 264 18310121 - CPE1139 - hypothetical protein 1140 27.08 0 1335177..1335464 + 95 18310122 - CPE1140 - hypothetical protein 1141 17.45 -2 1335992..1336501 + 169 18310123 - CPE1141 - hypothetical protein 1142 24.66 -1 1336950..1337537 + 195 18310124 - CPE1142 - hypothetical protein 1143 23.42 -1 1337651..1337983 + 110 18310125 - CPE1143 - hypothetical protein 1144 28.16 0 1338112..1339077 - 321 18310126 - CPE1144 - transcriptional regulator 1145 27.76 0 1339126..1339986 - 286 18310127 citG CPE1145 - CitG protein 1146 24.57 -1 1340264..1341301 + 345 18310128 citC CPE1146 - citrate (pro-3S)-lyase ligase 1147 31.05 0 1341325..1341630 + 101 18310129 cilG CPE1147 - citrate lyase subunit gamma 1148 33.67 +1 1341618..1342508 + 296 18310130 cilB CPE1148 - citrate lyase beta subunit 1149 32.12 0 1342512..1344071 + 519 18310131 cilA CPE1149 - citrate lyase alpha subunit 1150 26.71 0 1344090..1344602 + 170 18310132 - CPE1150 - triphosphoribosyl-dephospho-CoA synthase 1151 32.02 0 1344643..1345788 + 381 18310133 - CPE1151 - malate oxidoreductase 1152 31.92 0 1345809..1347149 + 446 18310134 citN CPE1152 - citrate/sodium symporter 1153 33.56 +1 1347518..1349752 + 744 18310135 pflA CPE1153 - formate acetyltransferase 1154 31.07 0 1350038..1350745 + 235 149134307 pflA CPE1154 - pyruvate formate-lyase activating enzyme 1155 28.68 0 1351007..1353736 + 909 18310137 mutS CPE1155 - DNA mismatch repair protein 1156 28.94 0 1353763..1355787 + 674 18310138 mutL CPE1156 - DNA mismatch repair protein 1157 29.15 0 1355805..1356737 + 310 18310139 miaA CPE1157 - tRNA delta(2)-isopentenylpyrophosphate transferase 1158 28.81 0 1356781..1357023 + 80 18310140 - CPE1158 - RNA chaperone Hfq 1159 31.07 0 1357128..1358408 + 426 18310141 - CPE1159 - aluminum resistance protein 1160 27.81 0 1358667..1359572 + 301 18310142 - CPE1160 - hypothetical protein 1161 28.92 0 1359730..1360341 - 203 18310143 lexA CPE1161 - LexA repressor 1162 30.03 0 1360549..1360941 + 130 18310144 - CPE1162 - hypothetical protein 1163 25.57 -1 1361032..1362384 - 450 18310145 xerC CPE1163 - site-specific tyrosine recombinase XerC 1164 31.05 0 1362882..1363100 - 72 18310146 - CPE1164 - hypothetical protein 1165 30.36 0 1363219..1364427 + 402 18310147 thd CPE1165 - threonine dehydratase, catabolic 1166 33.20 +1 1364467..1365936 - 489 18310148 - CPE1166 - lysine specific permease 1167 29.65 0 1366440..1367660 + 406 18310149 - CPE1167 - glutamate/ aspartate transporter 1168 26.13 0 1367695..1368027 - 110 18310150 - CPE1168 - hypothetical protein 1169 30.54 0 1368302..1368946 + 214 18310151 - CPE1169 - hypothetical protein 1170 27.85 0 1368979..1369197 - 72 18310152 - CPE1170 - hypothetical protein 1171 23.96 -1 1369260..1369643 - 127 18310153 - CPE1171 - hypothetical protein 1172 25.85 0 1369976..1370710 - 244 18310154 - CPE1172 - haloacid dehalogenase, IB family protein 1173 30.07 0 1370990..1371418 + 142 18310155 - CPE1173 - hypothetical protein 1174 30.54 0 1371494..1372246 - 250 18310156 exoA CPE1174 - exodeoxyribonuclease III 1175 29.39 0 1372431..1372658 + 75 18310157 - CPE1175 - hypothetical protein 1176 25.30 -1 1372966..1373388 - 140 18310158 - CPE1176 - hypothetical protein 1177 33.85 +1 1373711..1374289 - 192 18310159 pyrE CPE1177 - orotate phosphoribosyltransferase 1178 32.56 0 1374440..1375339 - 299 18310160 pyrD CPE1178 - dihydroorotate dehydrogenase 1B 1179 33.06 +1 1375359..1376099 - 246 18310161 pyrZ CPE1179 - dihydroorotate dehydrogenase electron transfer subunit 1180 31.48 0 1376124..1376987 - 287 18310162 pyrF CPE1180 - orotidine 5'-phosphate decarboxylase 1181 31.17 0 1376997..1378196 - 399 18310163 pyrC CPE1181 - dihydroorotase, multifunctional complex type 1182 23.27 -1 1378218..1378376 - 52 18310164 - CPE1182 - hypothetical protein 1183 31.06 0 1378381..1379304 - 307 18310165 pyrB CPE1183 - aspartate carbamoyltransferase catalytic subunit 1184 31.67 0 1379716..1380495 - 259 18310166 - CPE1184 - beta-lactamase 1185 32.15 0 1380727..1381827 - 366 18310167 pfk CPE1185 - 6-phosphofructokinase 1186 29.29 0 1382037..1382951 - 304 18310168 uppP CPE1186 - undecaprenyl pyrophosphate phosphatase 1187 30.27 0 1383211..1384188 - 325 18310169 manA CPE1187 - mannose-6-phosphate isomerase, class I 1188 28.24 0 1384439..1385794 + 451 18310170 - CPE1188 - UDP-N-acetylmuramyl tripeptide synthetase 1189 28.69 0 1385812..1386543 + 243 18310171 cobQ CPE1189 - glutamine amidotransferase, CobB/CobQ family 1190 30.36 0 1386523..1388070 - 515 18310172 - CPE1190 - hypothetical protein 1191 27.12 0 1388384..1388962 + 192 18310173 - CPE1191 - hypothetical protein 1192 25.33 -1 1388996..1390432 - 478 18310174 - CPE1192 - two-component sensor histidine kinase 1193 28.02 0 1390419..1391096 - 225 18310175 - CPE1193 - two-component response regulator 1194 28.11 0 1391335..1392597 - 420 18310176 - CPE1194 - hypothetical protein 1195 29.12 0 1392606..1395620 - 1004 18310177 - CPE1195 - hypothetical protein 1196 32.48 0 1395825..1397813 - 662 18310178 - CPE1196 - hypothetical protein 1197 28.18 0 1398012..1400357 - 781 18310179 - CPE1197 - helicase protein 1198 28.53 0 1400459..1400833 - 124 18310180 - CPE1198 - hypothetical protein 1199 31.39 0 1400875..1401852 - 325 18310181 - CPE1199 - hypothetical protein 1200 28.73 0 1402014..1403120 - 368 18310182 - CPE1200 - hypothetical protein 1201 26.91 0 1403122..1404039 - 305 18310183 - CPE1201 - hypothetical protein 1202 29.38 0 1404296..1406902 + 868 18310184 - CPE1202 - calcium-transporting ATPase 1203 28.39 0 1406947..1408563 - 538 18310185 spoVB CPE1203 - stage V sporulation protein B 1204 29.33 0 1408585..1409559 - 324 18310186 - CPE1204 - ribosomal large subunit pseudouridine synthase C 1205 33.08 +1 1409630..1410814 - 394 18310187 - CPE1205 - amidohydrolase family protein 1206 26.17 0 1411020..1413014 - 664 18310188 pcrA CPE1206 - ATP-dependent helicase 1207 30.41 0 1413167..1414639 + 490 18310189 - CPE1207 - nicotinate phosphoribosyltransferase 1208 29.38 0 1414693..1414869 - 58 18310190 - CPE1208 - hypothetical protein 1209 25.89 0 1414899..1415234 - 111 18310191 - CPE1209 - hypothetical protein 1210 29.29 0 1415853..1416272 + 139 18310192 - CPE1210 - FUR family transcriptional regulator 1211 29.54 0 1416350..1417747 - 465 18310193 - CPE1211 - dipeptidase PepV 1212 31.05 0 1417936..1419246 - 436 18310194 uraA CPE1212 - uracil permease 1213 24.15 -1 1419531..1419737 - 68 18310195 - CPE1213 - hypothetical protein 1214 29.06 0 1419709..1419942 - 77 18310196 - CPE1214 - hypothetical protein 1215 26.79 0 1420122..1420595 - 157 18310197 - CPE1215 - ABC transporter 1216 27.33 0 1420728..1420877 - 49 18310198 - CPE1216 - hypothetical protein 1217 30.97 0 1420883..1421941 - 352 18310199 - CPE1217 - ABC transporter 1218 28.74 0 1422029..1423030 - 333 18310200 - CPE1218 - ABC transporter 1219 28.76 0 1423043..1423807 - 254 18310201 cbiJ CPE1219 - cobalt-precorrin-6x reductase 1220 31.12 0 1423826..1424548 - 240 18310202 cbiH CPE1220 - precorrin-3B C17-methyltransferase 1221 27.63 0 1424703..1425701 - 332 18310203 cbiG CPE1221 - cobalamin biosynthesis protein CbiG 1222 31.61 0 1425704..1426459 - 251 18310204 cbiF CPE1222 - precorrin-4 C11-methyltransferase 1223 31.22 0 1426510..1427172 - 220 18310205 cbiL CPE1223 - cobalt-precorrin-2 C(20)-methyltransferase 1224 25.08 -1 1427172..1427765 - 197 18310206 cbiT CPE1224 - precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 1225 26.80 0 1427785..1428396 - 203 18310207 cbiE CPE1225 - precorrin-6y C5,15-methyltransferase (decarboxylating) 1226 32.06 0 1428424..1429521 - 365 18310208 cbiD CPE1226 - cobalt-precorrin-6A synthase 1227 31.11 0 1429539..1430168 - 209 18310209 cbiC CPE1227 - precorrin-8X methylmutase 1228 28.94 0 1430168..1431010 - 280 18310210 cbiK CPE1228 - CbiK protein 1229 30.90 0 1431530..1432762 + 410 18310211 - CPE1229 - hypothetical protein 1230 21.36 -2 1432782..1433090 - 102 18310212 - CPE1230 - hypothetical protein 1231 31.12 0 1433358..1436747 - 1129 18310213 - CPE1231 - surface protein 1232 38.52 +2 1437121..1438122 - 333 18310214 - CPE1232 - hypothetical protein 1233 37.63 +2 1438156..1438854 - 232 18310215 - CPE1233 - hypothetical protein 1234 32.80 +1 1439365..1442370 - 1001 18310216 nagJ CPE1234 - hyaluronidase 1235 27.36 0 1442598..1443551 - 317 18310217 - CPE1235 - hypothetical protein 1236 30.41 0 1443783..1444466 - 227 18310218 sod CPE1236 - Mn/Fe superoxide dismutase 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0