version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 988 32.60 +1 1191501..1192181 + 226 18309970 sdhB CPE0988 - L-serine dehydratase beta subunit 989 35.95 +1 1192185..1193063 + 292 18309971 sdhA CPE0989 - L-serine dehydratase alpha subunit 990 29.12 0 1193131..1193865 - 244 18309972 - CPE0990 - hypothetical protein 991 28.25 0 1194072..1194818 + 248 18309973 truA CPE0991 - tRNA pseudouridine synthase A 992 31.27 0 1194885..1195952 - 355 18309974 - CPE0992 - oxidoreductase, 2-nitropropane dioxygenase family 993 28.83 0 1196153..1196863 + 236 18309975 - CPE0993 - transcriptional regulator 994 28.07 0 1196919..1197830 - 303 18309976 - CPE0994 - radical SAM domain protein 995 32.08 0 1197974..1199008 + 344 18309977 - CPE0995 - glucanase 996 25.89 0 1199327..1199998 + 223 18309978 - CPE0996 - hypothetical protein 997 25.65 -1 1200014..1201693 + 559 18309979 - CPE0997 - hypothetical protein 998 31.08 0 1202355..1203995 + 546 18309980 gltX CPE0998 - glutamyl-tRNA synthetase 999 34.62 +1 1204190..1204345 + 51 18309981 - CPE0999 - hypothetical protein 1000 27.48 0 1204572..1205186 + 204 18309982 - CPE1000 - hypothetical protein 1001 30.81 0 1205280..1206902 - 540 18309983 - CPE1001 - aspartate aminotransferase 1002 23.17 -1 1207034..1208056 - 340 18309984 - CPE1002 - hypothetical protein 1003 25.56 -1 1208361..1208540 + 59 18309985 - CPE1003 - hypothetical protein 1004 30.84 0 1208552..1209475 + 307 18309986 hprK CPE1004 - HPr kinase/phosphorylase 1005 24.19 -1 1209520..1210449 + 309 18309987 - CPE1005 - divalent cation transporter 1006 31.27 0 1210516..1211922 + 468 18309988 - CPE1006 - putative aminopeptidase 1 1007 21.26 -2 1212047..1212634 + 195 18309989 - CPE1007 - hypothetical protein 1008 24.88 -1 1212707..1213570 + 287 18309990 - CPE1008 - hypothetical protein 1009 34.44 +1 1213738..1214097 + 119 18309991 mgsA CPE1009 - methylglyoxal synthase 1010 22.92 -1 1214278..1214613 + 111 18309992 - CPE1010 - hypothetical protein 1011 28.35 0 1214739..1214999 + 86 18309993 - CPE1011 - hypothetical protein 1012 31.50 0 1215083..1215463 + 126 18309994 - CPE1012 - putative endoribonuclease L-PSP 1013 30.89 0 1215507..1215752 + 81 18309995 - CPE1013 - hypothetical protein 1014 30.00 0 1215859..1218495 - 878 18309996 - CPE1014 - rubredoxin/flavodoxin/oxidoreductase 1015 29.66 0 1218700..1219542 - 280 18309997 - CPE1015 - hypothetical protein 1016 29.44 0 1219810..1220400 + 196 18309998 pabA CPE1016 - anthranilate synthase component II 1017 27.32 0 1220406..1221752 + 448 18309999 pabB CPE1017 - para-aminobenzoate synthase, component I 1018 26.53 0 1221806..1222540 + 244 18310000 - CPE1018 - 4-amino-4-deoxychorismate lyase 1019 32.26 0 1222555..1223112 + 185 18310001 folE CPE1019 - GTP cyclohydrolase I 1020 26.37 0 1223137..1223610 + 157 18310002 - CPE1020 - hypothetical protein 1021 32.72 +1 1223623..1224432 + 269 18310003 folP CPE1021 - dihydropteroate synthase 1022 28.10 0 1224445..1225266 + 273 18310004 folA/folK CPE1022 - dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1023 22.29 -1 1225337..1225807 - 156 18310005 - CPE1023 - hypothetical protein 1024 22.22 -1 1225922..1226362 + 146 18310006 - CPE1024 - hypothetical protein 1025 26.48 0 1226692..1227786 + 364 18310007 pykA CPE1025 - pyruvate kinase 1026 26.52 0 1227783..1228340 - 185 18310008 - CPE1026 - hypothetical protein 1027 27.69 0 1228514..1229965 + 483 18310009 - CPE1027 - hypothetical protein 1028 26.32 0 1229962..1230303 - 113 18310010 - CPE1028 - hypothetical protein 1029 29.20 0 1230323..1230709 - 128 18310011 - CPE1029 - hypothetical protein 1030 32.99 +1 1231228..1232676 + 482 18310012 - CPE1030 - hypothetical protein 1031 27.76 0 1232895..1233629 + 244 18310013 - CPE1031 - transcriptional regulator 1032 30.90 0 1233841..1235157 + 438 18310014 - CPE1032 - amidohydrolase family protein 1033 23.10 -1 1235303..1236103 - 266 18310015 - CPE1033 - choline/ethanolamine kinase family protein 1034 30.66 0 1236168..1237253 + 361 18310016 cobT CPE1034 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1035 26.92 0 1237291..1237851 + 186 18310017 - CPE1035 - hypothetical protein 1036 28.17 0 1237835..1238590 + 251 18310018 cobS CPE1036 - cobalamin synthase 1037 26.77 0 1238604..1238984 + 126 18310019 - CPE1037 - hypothetical protein 1038 30.08 0 1238989..1239633 + 214 18310020 cobC CPE1038 - alpha-ribazole-5'-phosphate phosphatase 1039 29.22 0 1239636..1240583 + 315 18310021 cbiB CPE1039 - cobalamin biosynthesis protein 1040 26.29 0 1240580..1241644 + 354 18310022 - CPE1040 - threonine-phosphate decarboxylase 1041 30.39 0 1242218..1243135 + 305 18310023 - CPE1041 - iron ABC transporter 1042 32.36 0 1243122..1244153 + 343 18310024 - CPE1042 - iron ABC transporter 1043 27.42 0 1244119..1244913 + 264 18310025 - CPE1043 - iron(III) dicitrate transport system 1044 30.89 0 1244923..1245576 + 217 18310026 - CPE1044 - hypothetical protein 1045 29.71 0 1245586..1247049 + 487 18310027 cbiP CPE1045 - cobyric acid synthase CobQ 1046 31.50 0 1247325..1253222 + 1965 18310028 - CPE1046 - hypothetical protein 1047 24.44 -1 1253315..1253764 + 149 18310029 - CPE1047 - hypothetical protein 1048 22.52 -1 1253987..1254430 + 147 18310030 - CPE1048 - hypothetical protein 1049 23.65 -1 1254652..1255818 + 388 18310031 - CPE1049 - hypothetical protein 1050 29.84 0 1256109..1256909 + 266 18310032 - CPE1050 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1051 28.95 0 1257260..1258444 - 394 18310033 cfa CPE1051 - cyclopropane-fatty-acyl-phospholipid synthase 1052 32.52 0 1258777..1260132 + 451 18310034 - CPE1052 - putative thiosulfate sulfurtransferase 1053 18.54 -2 1260136..1260561 + 141 18310035 - CPE1053 - hypothetical protein 1054 25.83 0 1260786..1261025 + 79 18310036 - CPE1054 - hypothetical protein 1055 25.94 0 1261234..1262004 + 256 18310037 - CPE1055 - endonuclease/exonuclease/phosphatase family protein 1056 30.18 0 1262188..1263012 + 274 18310038 hisB CPE1056 - histidinol-phosphatase 1057 27.99 0 1263140..1264561 - 473 18310039 - CPE1057 - tetratricopeptide repeat protein 1058 29.30 0 1264921..1266582 - 553 18310040 nadE CPE1058 - NAD synthetase 1059 26.57 0 1267144..1267557 + 137 18310041 - CPE1059 - hypothetical protein 1060 29.65 0 1267577..1268527 + 316 18310042 - CPE1060 - SPFH domain protein/band 7 family protein 1061 25.83 0 1268707..1269759 + 350 18310043 alr CPE1061 - alanine racemase 1062 29.47 0 1269992..1271026 + 344 18310044 - CPE1062 - hypothetical protein 1063 30.94 0 1271044..1271712 + 222 18310045 nqrD CPE1063 - SoxR-reducing system protein RsxE 1064 28.99 0 1271741..1272316 + 191 18310046 nqrE CPE1064 - Na-translocating NADH-quinone reductase 1065 31.23 0 1272333..1273139 + 268 18310047 - CPE1065 - ferredoxin 1066 30.14 0 1273220..1273720 + 166 18310048 - CPE1066 - cytidine/deoxycytidylate deaminase family protein 1067 27.74 0 1273892..1274356 + 154 18310049 - CPE1067 - MarR family transcriptional regulator 1068 32.10 0 1274358..1275332 + 324 18310050 fabH CPE1068 - 3-oxoacyl-(acyl carrier protein) synthase III 1069 30.37 0 1275429..1276373 + 314 18310051 fabD CPE1069 - malonyl CoA-acyl carrier protein transacylase 1070 30.77 0 1276377..1277117 + 246 18310052 fabG CPE1070 - 3-ketoacyl-(acyl-carrier-protein) reductase 1071 33.01 +1 1277132..1278373 + 413 18310053 fabF CPE1071 - 3-oxoacyl-(acyl carrier protein) synthase II 1072 28.25 0 1278385..1278876 + 163 18310054 accB CPE1072 - acetyl-CoA carboxylase biotin carboxyl carrier protein 1073 32.14 0 1278879..1279298 + 139 18310055 fabZ CPE1073 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1074 31.41 0 1279310..1280662 + 450 18310056 accC CPE1074 - biotin carboxylase 1075 33.05 +1 1280827..1281534 + 235 18310057 accD CPE1075 - acetyl-CoA carboxylase carboxyl transferase subunit beta 1076 31.13 0 1281527..1282342 + 271 18310058 accA CPE1076 - acetyl-CoA carboxylase carboxyl transferase subunit alpha 1077 29.74 0 1282443..1282832 - 129 18310059 - CPE1077 - PadR family transcriptional regulator 1078 40.09 +2 1282959..1283180 + 73 18310060 - CPE1078 - hypothetical protein 1079 28.41 0 1283238..1283948 - 236 18310061 - CPE1079 - hypothetical protein 1080 30.10 0 1284275..1284985 + 236 18310062 - CPE1080 - pseudouridylate synthase 1081 26.46 0 1284976..1285542 + 188 18310063 - CPE1081 - hypothetical protein 1082 27.63 0 1285574..1286449 + 291 18310064 - CPE1082 - RpiR family transcriptional regulator 1083 29.60 0 1286708..1287886 + 392 18310065 - CPE1083 - hypothetical protein 1084 29.66 0 1288009..1288662 + 217 18310066 cmk CPE1084 - cytidylate kinase 1085 29.09 0 1288664..1289512 + 282 18310067 lytB CPE1085 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1086 24.91 -1 1289622..1290416 + 264 18310068 - CPE1086 - hypothetical protein 1087 28.00 0 1290516..1290665 - 49 18310069 - CPE1087 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.