version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 948 68.86 0 1088643..1089554 + 303 148272126 - CMM_0946 - putative sugar ABC transporter, permease component 949 73.91 0 1089587..1091449 + 620 148272127 - CMM_0947 - putative beta-glycosidase 950 74.91 0 1091558..1092697 + 379 148272128 - CMM_0948 - LacI family transcriptional regulator 951 76.67 0 1092708..1092917 - 69 148272129 - CMM_0949 - hypothetical protein 952 74.05 0 1092917..1093471 - 184 148272130 - CMM_0950 - hypothetical protein 953 76.88 +1 1093591..1094295 + 234 148272131 - CMM_0951 - hypothetical protein 954 73.21 0 1094342..1095748 - 468 148272132 - CMM_0952 - putative MFS permease 955 69.99 0 1095854..1097269 - 471 148272133 - CMM_0953 - putative MFS permease 956 76.43 0 1097486..1097782 + 98 148272134 - CMM_0954 - hypothetical protein 957 79.26 +1 1097779..1099572 - 597 148272135 - CMM_0955 - putative peptide ABC transporter, permease compound 958 76.72 +1 1099572..1101113 - 513 148272136 - CMM_0956 - putative peptide ABC transporter, substrate-binding protein 959 77.75 +1 1101103..1102527 - 474 148272137 - CMM_0957 - putative MFS permease 960 78.74 +1 1102524..1103351 - 275 148272138 - CMM_0958 - putative peptide ABC transporter, ATP-binding protein 961 78.75 +1 1103348..1104208 - 286 148272139 - CMM_0959 - putative peptide ABC transporter, ATP-binding protein 962 75.57 0 1104310..1104792 - 160 148272140 ribH CMM_0960 - riboflavin synthase subunit beta 963 73.18 0 1104789..1106123 - 444 148272141 ribAB CMM_0961 - 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 964 73.97 0 1106120..1106776 - 218 148272142 ribC CMM_0962 - riboflavin synthase subunit alpha 965 78.71 +1 1106776..1107846 - 356 148272143 ribD CMM_0963 - diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 966 76.47 0 1108127..1108891 - 254 148272144 - CMM_0964 - putative hydrolase 967 70.32 0 1108888..1109901 - 337 148272145 trpS CMM_0965 - tryptophanyl-tRNA synthetase 968 71.75 0 1109984..1110829 - 281 148272146 xthA CMM_0966 - putative exonuclease III 969 73.06 0 1110840..1111949 - 369 148272147 - CMM_0967 - membrane protein, putative ribonuclease 970 77.17 +1 1112074..1113729 + 551 148272148 ptsA CMM_0968 - phosphoenolpyruvate--protein phosphatase 971 66.93 -1 1113818..1114579 - 253 148272149 sdhB CMM_0969 - succinate dehydrogenase iron-sulfur subunit 972 67.87 -1 1114637..1116460 - 607 148272150 sdhA CMM_0970 - succinate dehydrogenase flavoprotein subunit 973 68.17 -1 1116493..1116957 - 154 148272151 sdhD CMM_0971 - putative succinate dehydrogenase, hydrophobic membrane subunit 974 65.29 -1 1116960..1117394 - 144 148272152 sdhC CMM_0972 - succinate dehydrogenase, cytochrome b subunit 975 76.72 +1 1117535..1118728 - 397 148272153 - CMM_0973 - putative mannosyl transferase 976 71.93 0 1118828..1119949 + 373 148272154 manC CMM_0974 - hypothetical protein 977 71.88 0 1120024..1121097 + 357 148272155 - CMM_0975 - putative ABC transporter, substrate-binding protein 978 68.13 -1 1121248..1122342 + 364 148272156 - CMM_0976 - putative ABC transporter, substrate-binding protein 979 71.27 0 1122424..1123965 + 513 148272157 - CMM_0977 - putative sugar ABC transporter, ATPase component 980 72.98 0 1123962..1125338 + 458 148272158 - CMM_0978 - putative sugar ABC transporter, permease component 981 71.19 0 1125335..1126639 + 434 148272159 - CMM_0979 - putative sugar ABC transporter, permease component 982 72.81 0 1126645..1127067 + 140 148272160 cddA CMM_0980 - cytidine deaminase 983 74.21 0 1127064..1128362 + 432 148272161 deoA CMM_0981 - thymidine phosphorylase 984 73.61 0 1128418..1129353 - 311 148272162 iunH CMM_0982 - inosine-uridine preferring nucleoside hydrolase 985 72.56 0 1129456..1130574 + 372 148272163 addA CMM_0983 - adenosine deaminase 986 74.00 0 1130643..1131092 + 149 148272164 - CMM_0984 - phosphotransferase system mannitol/fructose-specific IIA component 987 69.23 0 1131089..1131361 + 90 148272165 - CMM_0985 - hypothetical protein 988 76.06 0 1131310..1132320 - 336 148272166 - CMM_0986 - hypothetical protein 989 77.19 +1 1132317..1132943 - 208 148272167 - CMM_0987 - MerR family transcriptional regulator 990 73.53 0 1133031..1134734 - 567 148272168 manB CMM_0988 - putative phosphomannomutase 991 72.58 0 1134731..1135558 - 275 148272169 punA CMM_0989 - purine nucleoside phosphorylase 992 71.59 0 1135649..1137091 + 480 148272170 lpdA CMM_0990 - flavoprotein disulfide reductase 993 73.33 0 1137170..1138939 - 589 148272171 accA CMM_0991 - acetyl/propionyl CoA carboxylase subunit 994 76.89 +1 1139062..1139589 + 175 148272172 - CMM_0992 - hypothetical protein 995 76.04 0 1139611..1140282 - 223 148272173 - CMM_0993 - hypothetical protein 996 73.85 0 1140337..1141602 + 421 148272174 - CMM_0994 - putative RNA methyltransferase 997 73.05 0 1141702..1142406 + 234 148272175 - CMM_0995 - putative two component system, response regulator 998 74.16 0 1142396..1143742 + 448 148272176 - CMM_0996 - putative two-component system, sensor kinase 999 74.00 0 1143739..1144761 + 340 148272177 - CMM_0997 - hypothetical protein 1000 80.34 +1 1145049..1145282 - 77 148272178 - CMM_0998 - hypothetical protein 1001 69.27 0 1145279..1146892 - 537 148272179 accD CMM_0999 - putative acetyl/propionyl-CoA carboxylase beta chain 1002 77.01 +1 1147000..1147782 + 260 148272180 - CMM_1000 - putative lipoate protein ligase 1003 75.35 0 1147786..1148580 + 264 148272181 - CMM_1001 - hypothetical protein 1004 72.45 0 1148600..1149118 - 172 148272182 - CMM_1002 - hypothetical protein 1005 74.91 0 1149255..1150382 + 375 148272183 purK CMM_1003 - phosphoribosylaminoimidazole carboxylase ATPase subunit 1006 72.57 0 1150437..1150961 + 174 148272184 purE CMM_1004 - phosphoribosylaminoimidazole carboxylase catalytic subunit 1007 70.89 0 1150958..1152307 + 449 148272185 - CMM_1005 - putative transcriptional regulator 1008 75.19 0 1152323..1153507 - 394 148272186 wcqB CMM_1006 - putative glycosyltransferase,mannosyltransferase 1009 66.53 -1 1153554..1154300 - 248 148272187 wzt CMM_1007 - putative polysaccharide ABC transporter, ATP-binding protein 1010 65.63 -1 1154284..1155153 - 289 148272188 wzm CMM_1008 - putative polysaccharide ABC-transporter,permease component 1011 76.49 0 1155248..1156102 - 284 148272189 rmlD CMM_1009 - putative dTDP-4-dehydrorhamnose reductase 1012 69.39 0 1156099..1157088 - 329 148272190 rmlB CMM_1010 - putative dTDP-glucose 4,6-dehydratase 1013 73.73 0 1157269..1157721 + 150 148272191 wcqC CMM_1011 - putative sugar translocase 1014 70.96 0 1157747..1158352 + 201 148272192 rmlC CMM_1012 - dTDP-4-dehydrorhamnose 3,5-epimerase 1015 67.13 -1 1158356..1159219 + 287 148272193 rmlA CMM_1013 - putative glucose-1-phosphate thymidylyltransferase 1016 76.58 0 1159283..1160260 - 325 148272194 wcqD CMM_1014 - putative NDP-sugar-epimerase 1017 71.61 0 1160257..1161288 - 343 148272195 wcqE CMM_1015 - putative glycosyl transferase 1018 73.10 0 1161285..1162139 - 284 148272196 wcqF CMM_1016 - putative glycosyl transferase 1019 72.36 0 1162412..1164625 + 737 148272197 wcqG CMM_1017 - hypothetical protein 1020 75.49 0 1164622..1165584 + 320 148272198 wcqH CMM_1018 - putative glycosyltransferase 1021 74.09 0 1165776..1166624 + 282 148272199 wcqI CMM_1019 - putative glycosyltransferase 1022 67.18 -1 1166692..1167855 + 387 148272200 glfA CMM_1020 - hypothetical protein 1023 70.98 0 1167855..1169873 + 672 148272201 wcqJ CMM_1021 - putative glycosyltransferase 1024 72.19 0 1170018..1171847 + 609 148272202 wcqK CMM_1022 - putative secreted protein 1025 68.15 -1 1172007..1172477 + 156 148272203 wcqL CMM_1023 - hypothetical protein 1026 73.55 0 1172505..1173797 - 430 148272204 wcqM CMM_1024 - hypothetical protein 1027 74.61 0 1173846..1175393 - 515 148272205 wzy4 CMM_1025 - membrane protein, putative polysaccharide polymerase 1028 71.76 0 1175393..1176571 - 392 148272206 gcdH CMM_1026 - putative glutaryl-CoA dehydrogenase 1029 74.94 0 1176737..1178029 + 430 148272207 manA CMM_1027 - putative mannose-6-phosphate isomerase 1030 71.83 0 1178064..1179032 + 322 148272208 galE1 CMM_1028 - hypothetical protein 1031 70.13 0 1179182..1179499 + 105 148272209 whiB1 CMM_1029 - transcriptional regulator whiB-like protein 1032 77.62 +1 1179593..1182670 + 1025 148272210 wcqR CMM_1030 - putative glycosyl transferase 1033 78.60 +1 1182675..1184174 + 499 148272211 - CMM_1031 - putative secreted protein 1034 74.32 0 1184261..1184704 - 147 148272212 - CMM_1032 - hypothetical protein 1035 70.83 0 1184750..1184965 + 71 148272213 - CMM_1033 - hypothetical protein 1036 71.85 0 1184968..1186395 + 475 148272214 manB CMM_1034 - phosphomannomutase/phosphoglucomutase 1037 71.47 0 1186485..1186817 + 110 148272215 - CMM_1035 - hypothetical protein 1038 72.69 0 1186861..1187076 + 71 148272216 copP CMM_1036 - putative copper binding protein 1039 76.65 0 1187078..1189552 + 824 148272217 copA CMM_1037 - putative metal-transporting ATPase 1040 70.10 0 1189615..1191099 + 494 148272218 ahcY CMM_1038 - S-adenosyl-L-homocysteine hydrolase 1041 78.06 +1 1191194..1192009 - 271 148272219 - CMM_1039 - hypothetical protein 1042 72.99 0 1192080..1193075 + 331 148272220 - CMM_1040 - hypothetical protein 1043 74.71 0 1193129..1195615 - 828 148272221 bglK CMM_1041 - beta-glucosidase 1044 73.22 0 1195669..1196949 - 426 148272222 - CMM_1042 - putative MFS permease 1045 74.61 0 1197061..1197702 + 213 148272223 - CMM_1043 - TetR family transcriptional regulator 1046 78.13 +1 1197725..1199032 - 435 148272224 - CMM_1044 - hypothetical protein 1047 73.90 0 1199047..1200000 - 317 148272225 - CMM_1045 - putative regulatory protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.