version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 892 80.07 +1 1016431..1017318 - 295 148272070 strB CMM_0891 - putative streptomycin phosphotransferase 893 73.58 0 1017315..1017965 - 216 148272071 - CMM_0892 - hypothetical protein 894 75.73 0 1018383..1021241 - 952 148272072 - CMM_0893 - LuxR family transcriptional regulator 895 73.55 0 1021575..1022228 - 217 148272073 - CMM_0894 - putative nucleoside-diphosphate-sugar epimerase 896 71.72 0 1022461..1024578 + 705 148272074 ptaA CMM_0895 - phosphate acetyltransferase 897 72.71 0 1024644..1025834 + 396 148272075 ackA CMM_0896 - hypothetical protein 898 73.10 0 1026122..1031185 + 1687 148272076 - CMM_0897 - hypothetical protein 899 70.42 0 1031353..1032204 + 283 148272077 - CMM_0898 - hypothetical protein 900 72.52 0 1032201..1033412 + 403 148272078 - CMM_0899 - hypothetical protein 901 76.46 0 1033458..1035938 + 826 148272079 - CMM_0900 - DNA polymerase III subunits gamma and tau 902 70.00 0 1035945..1036544 + 199 148272080 recR CMM_0901 - recombination protein RecR 903 70.22 0 1036654..1037919 + 421 148272081 lysC CMM_0902 - aspartate kinase 904 74.41 0 1037969..1039066 + 365 148272082 asdA CMM_0903 - aspartate-semialdehyde dehydrogenase 905 67.68 -1 1039154..1040632 + 492 148272083 mqoA CMM_0904 - malate:quinone oxidoreductase 906 73.67 0 1040702..1041886 + 394 148272084 - CMM_0905 - hypothetical protein 907 75.68 0 1041957..1042655 + 232 148272085 - CMM_0906 - putative two-component system, response regulator 908 69.63 0 1042656..1043330 + 224 148272086 tdkA CMM_0907 - thymidine kinase 909 71.61 0 1043686..1045080 + 464 148272087 - CMM_0908 - putative tyrosine-protein kinase 910 76.87 +1 1045419..1046369 + 316 148272088 - CMM_0909 - hypothetical protein 911 72.32 0 1046366..1048186 + 606 148272089 - CMM_0910 - hypothetical protein 912 73.68 0 1048274..1048858 + 194 148272090 - CMM_0911 - hypothetical protein 913 77.16 +1 1049131..1049721 + 196 148272091 - CMM_0912 - hypothetical protein 914 75.19 0 1049761..1050288 - 175 148272092 - CMM_0913 - hypothetical protein 915 75.25 0 1050375..1051388 + 337 148272093 - CMM_0914 - putative flavin-dependent oxidoreductase/monooxygenase 916 67.87 -1 1051481..1053715 + 744 148272094 pbpC CMM_0915 - putative penicillin-binding protein 917 73.30 0 1053861..1055141 + 426 148272095 - CMM_0916 - putative acyltransferase 918 70.64 0 1055138..1055590 + 150 148272096 - CMM_0917 - hypothetical protein 919 71.01 0 1055835..1056779 - 314 148272097 - CMM_0918 - putative phosphohydrolase 920 68.36 -1 1056779..1059316 - 845 148272098 pbpD CMM_0919 - putative penicillin-binding protein 921 70.49 0 1059422..1059604 + 60 148272099 - CMM_0920 - hypothetical protein 922 75.48 0 1059604..1060068 + 154 148272100 - CMM_0921 - putative endoribonuclease, putative translation initiation inhibitor 923 72.65 0 1060150..1062189 - 679 148272101 acsA1 CMM_0922 - acetyl-coenzyme A synthetase 924 77.91 +1 1062551..1063795 + 414 148272102 - CMM_0923 - hypothetical protein 925 77.88 +1 1063792..1064817 + 341 148272103 - CMM_0924 - hypothetical protein 926 76.76 +1 1064943..1065368 + 141 148272104 - CMM_0925 - hypothetical protein 927 77.36 +1 1065365..1065766 + 133 148272105 - CMM_0925A - hypothetical protein 928 79.72 +1 1065756..1066115 + 119 148272106 - CMM_0926 - hypothetical protein 929 70.36 0 1066457..1069411 + 984 148272107 topA CMM_0927 - DNA topoisomerase I 930 75.31 0 1069408..1070043 + 211 148272108 tmkA CMM_0928 - hypothetical protein 931 75.66 0 1070040..1071284 + 414 148272109 holB CMM_0929 - DNA polymerase III subunit delta' 932 73.57 0 1071281..1072858 + 525 148272110 - CMM_0930 - hypothetical protein 933 74.39 0 1073336..1074694 + 452 148272111 pbpE CMM_0931 - D-alanyl-D-alanine carboxypeptidase 934 73.60 0 1074759..1075349 + 196 148272112 pncA CMM_0932 - putative pyrazinamidase / nicotinamidase 935 73.24 0 1075427..1076902 + 491 148272113 gabD CMM_0933 - putative succinate-semialdehyde dehydrogenase 936 75.41 0 1076902..1077702 + 266 148272114 - CMM_0934 - putative tRNA/rRNA methyltransferase 937 71.26 0 1077769..1078116 + 115 148272115 - CMM_0935 - hypothetical protein 938 73.71 0 1078250..1078618 + 122 148272116 - CMM_0936 - hypothetical protein 939 73.50 0 1078702..1080633 - 643 148272117 - CMM_0937 - putative multidrug export ABC transporter, fused permease and ATP-binding protein 940 71.41 0 1080838..1081764 + 308 148272118 - CMM_0938 - putative multidrug export ABC transporter, ATP-binding protein 941 70.02 0 1081761..1082594 + 277 148272119 - CMM_0939 - putative multidrug export ABC transporter,permease component 942 68.80 -1 1082591..1083433 + 280 148272120 - CMM_0940 - putative multidrug export ABC transporter,permease component 943 76.59 0 1083396..1084745 - 449 148272121 - CMM_0941 - MFS family transporter 944 77.02 +1 1084888..1085718 + 276 148272122 - CMM_0942 - hypothetical protein 945 72.01 0 1085724..1086191 + 155 148272123 - CMM_0943 - hypothetical protein 946 71.16 0 1086418..1087686 + 422 148272124 - CMM_0944 - putative sugar ABC transporter, substrate-binding protein 947 69.96 0 1087690..1088631 + 313 148272125 - CMM_0945 - putative sugar ABC transporter, permease component 948 68.86 0 1088643..1089554 + 303 148272126 - CMM_0946 - putative sugar ABC transporter, permease component 949 73.91 0 1089587..1091449 + 620 148272127 - CMM_0947 - putative beta-glycosidase 950 74.91 0 1091558..1092697 + 379 148272128 - CMM_0948 - LacI family transcriptional regulator 951 76.67 0 1092708..1092917 - 69 148272129 - CMM_0949 - hypothetical protein 952 74.05 0 1092917..1093471 - 184 148272130 - CMM_0950 - hypothetical protein 953 76.88 +1 1093591..1094295 + 234 148272131 - CMM_0951 - hypothetical protein 954 73.21 0 1094342..1095748 - 468 148272132 - CMM_0952 - putative MFS permease 955 69.99 0 1095854..1097269 - 471 148272133 - CMM_0953 - putative MFS permease 956 76.43 0 1097486..1097782 + 98 148272134 - CMM_0954 - hypothetical protein 957 79.26 +1 1097779..1099572 - 597 148272135 - CMM_0955 - putative peptide ABC transporter, permease compound 958 76.72 +1 1099572..1101113 - 513 148272136 - CMM_0956 - putative peptide ABC transporter, substrate-binding protein 959 77.75 +1 1101103..1102527 - 474 148272137 - CMM_0957 - putative MFS permease 960 78.74 +1 1102524..1103351 - 275 148272138 - CMM_0958 - putative peptide ABC transporter, ATP-binding protein 961 78.75 +1 1103348..1104208 - 286 148272139 - CMM_0959 - putative peptide ABC transporter, ATP-binding protein 962 75.57 0 1104310..1104792 - 160 148272140 ribH CMM_0960 - riboflavin synthase subunit beta 963 73.18 0 1104789..1106123 - 444 148272141 ribAB CMM_0961 - 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 964 73.97 0 1106120..1106776 - 218 148272142 ribC CMM_0962 - riboflavin synthase subunit alpha 965 78.71 +1 1106776..1107846 - 356 148272143 ribD CMM_0963 - diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 966 76.47 0 1108127..1108891 - 254 148272144 - CMM_0964 - putative hydrolase 967 70.32 0 1108888..1109901 - 337 148272145 trpS CMM_0965 - tryptophanyl-tRNA synthetase 968 71.75 0 1109984..1110829 - 281 148272146 xthA CMM_0966 - putative exonuclease III 969 73.06 0 1110840..1111949 - 369 148272147 - CMM_0967 - membrane protein, putative ribonuclease 970 77.17 +1 1112074..1113729 + 551 148272148 ptsA CMM_0968 - phosphoenolpyruvate--protein phosphatase 971 66.93 -1 1113818..1114579 - 253 148272149 sdhB CMM_0969 - succinate dehydrogenase iron-sulfur subunit 972 67.87 -1 1114637..1116460 - 607 148272150 sdhA CMM_0970 - succinate dehydrogenase flavoprotein subunit 973 68.17 -1 1116493..1116957 - 154 148272151 sdhD CMM_0971 - putative succinate dehydrogenase, hydrophobic membrane subunit 974 65.29 -1 1116960..1117394 - 144 148272152 sdhC CMM_0972 - succinate dehydrogenase, cytochrome b subunit 975 76.72 +1 1117535..1118728 - 397 148272153 - CMM_0973 - putative mannosyl transferase 976 71.93 0 1118828..1119949 + 373 148272154 manC CMM_0974 - hypothetical protein 977 71.88 0 1120024..1121097 + 357 148272155 - CMM_0975 - putative ABC transporter, substrate-binding protein 978 68.13 -1 1121248..1122342 + 364 148272156 - CMM_0976 - putative ABC transporter, substrate-binding protein 979 71.27 0 1122424..1123965 + 513 148272157 - CMM_0977 - putative sugar ABC transporter, ATPase component 980 72.98 0 1123962..1125338 + 458 148272158 - CMM_0978 - putative sugar ABC transporter, permease component 981 71.19 0 1125335..1126639 + 434 148272159 - CMM_0979 - putative sugar ABC transporter, permease component 982 72.81 0 1126645..1127067 + 140 148272160 cddA CMM_0980 - cytidine deaminase 983 74.21 0 1127064..1128362 + 432 148272161 deoA CMM_0981 - thymidine phosphorylase 984 73.61 0 1128418..1129353 - 311 148272162 iunH CMM_0982 - inosine-uridine preferring nucleoside hydrolase 985 72.56 0 1129456..1130574 + 372 148272163 addA CMM_0983 - adenosine deaminase 986 74.00 0 1130643..1131092 + 149 148272164 - CMM_0984 - phosphotransferase system mannitol/fructose-specific IIA component 987 69.23 0 1131089..1131361 + 90 148272165 - CMM_0985 - hypothetical protein 988 76.06 0 1131310..1132320 - 336 148272166 - CMM_0986 - hypothetical protein 989 77.19 +1 1132317..1132943 - 208 148272167 - CMM_0987 - MerR family transcriptional regulator 990 73.53 0 1133031..1134734 - 567 148272168 manB CMM_0988 - putative phosphomannomutase 991 72.58 0 1134731..1135558 - 275 148272169 punA CMM_0989 - purine nucleoside phosphorylase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.