version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 577 71.49 0 658675..659586 + 303 148271755 menB CMM_0576 - naphthoate synthase 578 78.45 +1 659612..660799 + 395 148271756 menE CMM_0577 - O-succinylbenzoate--CoA ligase 579 74.19 0 660845..661828 - 327 148271757 - CMM_0578 - putative quinone reductase 580 77.31 +1 661825..662256 - 143 148271758 - CMM_0579 - MarR family transcriptional regulator 581 71.16 0 662376..662798 + 140 148271759 - CMM_0580 - hypothetical protein 582 66.09 -1 662903..663076 - 57 148271760 - CMM_0581 - hypothetical protein 583 76.42 0 663209..663526 + 105 148271761 - CMM_0582 - hypothetical protein 584 75.25 0 663516..663911 - 131 148271762 - CMM_0583 - putative NTP pyrophosphohydrolase 585 76.90 +1 664071..664676 - 201 148271763 - CMM_0584 - putative acetyltransferase 586 73.06 0 664690..665268 - 192 148271764 - CMM_0585 - putative acetyltransferase 587 74.85 0 665325..666644 - 439 148271765 hemA CMM_0586 - glutamyl-tRNA reductase 588 74.73 0 666749..667876 + 375 148271766 hemE CMM_0587 - uroporphyrinogen decarboxylase 589 77.99 +1 667869..669308 + 479 148271767 hemY CMM_0588 - hypothetical protein 590 70.76 0 669436..669777 + 113 148271768 - CMM_0589 - hypothetical protein 591 64.99 -1 669810..670226 + 138 148271769 - CMM_0590 - hypothetical protein 592 76.45 0 670216..670491 + 91 148271770 - CMM_0591 - hypothetical protein 593 75.95 0 670513..672150 + 545 148271771 - CMM_0592 - hypothetical protein 594 74.82 0 672238..672801 + 187 148271772 - CMM_0593 - hypothetical protein 595 72.05 0 672863..673642 + 259 148271773 - CMM_0594 - hypothetical protein 596 71.70 0 673642..674892 + 416 148271774 hemH CMM_0595 - ferrochelatase 597 77.10 +1 674889..675875 + 328 148271775 hemC CMM_0596 - porphobilinogen deaminase 598 74.40 0 675872..676711 + 279 148271776 hemD CMM_0597 - hypothetical protein 599 72.68 0 676708..677688 + 326 148271777 hemB CMM_0598 - delta-aminolevulinic acid dehydratase 600 74.85 0 677771..679138 + 455 148271778 hemL CMM_0599 - glutamate-1-semialdehyde 2,1-aminomutase 601 74.21 0 679197..680018 - 273 148271779 - CMM_0600 - DNA/RNA endonuclease 602 72.10 0 680102..680764 - 220 148271780 hemO CMM_0601 - Heme oxygenase (decyclizing) 603 66.67 -1 680840..681232 - 130 148271781 - CMM_0602 - hypothetical protein 604 77.39 +1 681317..682342 - 341 148271782 - CMM_0603 - putative Zinc-dependant oxidoreductase 605 71.93 0 682375..683400 - 341 148271783 pfkA CMM_0604 - hypothetical protein 606 77.26 +1 683439..684146 + 235 148271784 - CMM_0605 - putative kinase 607 69.66 0 684157..684657 - 166 148271785 - CMM_0606 - putative general stress protein 608 76.09 0 684723..685688 + 321 148271786 - CMM_0607 - putative DNA repair protein 609 72.00 0 685740..686546 - 268 148271787 - CMM_0608 - hypothetical protein 610 73.58 0 686616..687569 + 317 148271788 - CMM_0609 - putative aldose-1-epimerase 611 72.22 0 687668..688135 + 155 148271789 - CMM_0610 - putative glyoxylase family protein 612 75.60 0 688242..688700 + 152 148271790 - CMM_0611 - MarR family transcriptional regulator 613 76.57 0 688722..689468 - 248 148271791 - CMM_0612 - hypothetical protein 614 75.87 0 689561..691201 - 546 148271792 sacC CMM_0613 - putative levanase/invertase 615 70.11 0 691469..693034 + 521 148271793 sacB CMM_0614 - putative levansucrase 616 80.43 +1 693118..693771 + 217 148271794 - CMM_0615 - hypothetical protein 617 74.38 0 693943..694707 + 254 148271795 - CMM_0616 - hypothetical protein 618 78.86 +1 694704..695531 + 275 148271796 - CMM_0617 - hypothetical protein 619 75.97 0 695606..696508 - 300 148271797 - CMM_0618 - LysR family transcriptional regulator 620 73.05 0 696681..700331 + 1216 148271798 putA CMM_0619 - delta-1-pyrroline-5-carboxylate dehydrogenase /proline oxidase 621 75.76 0 700353..700484 + 43 148271799 - CMM_0620 - hypothetical protein 622 78.30 +1 700481..701185 + 234 148271800 - CMM_0621 - hypothetical protein 623 78.76 +1 701209..701787 + 192 148271801 - CMM_0622 - putative 4'-phosphopantetheinyl transferase 624 75.19 0 701792..703105 - 437 148271802 - CMM_0623 - metalloendopeptidase family M1 625 76.37 0 703102..707304 - 1400 148271803 npsC CMM_0624 - non-ribosomal peptide synthase 626 79.13 +1 707376..707744 - 122 148271804 - CMM_0625 - hypothetical protein 627 70.70 0 707868..708239 + 123 148271805 - CMM_0626 - hypothetical protein 628 60.07 -2 709446..716102 + 2218 148271806 - CMM_0627 - hypothetical protein 629 72.37 0 716740..717177 - 145 148271807 - CMM_0628 - AsnC family transcriptional regulator 630 69.99 0 717361..718203 + 280 148271808 - CMM_0629 - hypothetical protein 631 74.54 0 718242..719486 + 414 148271809 rocD CMM_0630 - putative ornithine aminotransferase 632 72.29 0 719607..720104 + 165 148271810 - CMM_0631 - hypothetical protein 633 72.38 0 720135..720782 + 215 148271811 - CMM_0632 - hypothetical protein 634 75.93 0 720800..721792 - 330 148271812 - CMM_0633 - permease DMT family 635 76.87 +1 721857..722258 - 133 148271813 - CMM_0634 - hypothetical protein 636 71.53 0 722346..723230 - 294 148271814 - CMM_0635 - putative NDP-sugar epimerase 637 73.62 0 723227..723643 - 138 148271815 - CMM_0636 - hypothetical protein 638 77.91 +1 723640..724875 - 411 148271816 - CMM_0637 - benzoate transport protein BenE family 639 75.87 0 725136..726395 + 419 148271817 - CMM_0638 - M23 family membrane bound metalloendopeptidase 640 76.21 0 726453..727175 + 240 148271818 - CMM_0639 - hypothetical protein 641 65.79 -1 727339..727794 + 151 148271819 - CMM_0640 - hypothetical protein 642 67.93 -1 727797..728033 + 78 148271820 - CMM_0641 - hypothetical protein 643 75.69 0 728165..728962 + 265 148271821 - CMM_0642 - hypothetical protein 644 71.97 0 729154..730227 + 357 148271822 - CMM_0643 - putative oxidoreductase 645 76.42 0 730274..731011 - 245 148271823 - CMM_0644 - putative two-component system, response regulator 646 76.58 0 731008..732228 - 406 148271824 - CMM_0645 - putative two-component system sensor kinase 647 72.83 0 732294..732650 - 118 148271825 - CMM_0646 - hypothetical protein 648 74.33 0 732755..733354 - 199 148271826 - CMM_0647 - TetR family transcriptional regulator 649 72.79 0 733415..734998 + 527 148271827 - CMM_0648 - putative efflux MFS permease 650 63.30 -2 735725..736021 + 98 148271828 - CMM_0649 - hypothetical protein 651 74.71 0 736095..737114 - 339 148271829 - CMM_0650 - putative monooxygenase 652 79.74 +1 737194..738264 - 356 148271830 - CMM_0651 - putative monooxygenase 653 75.67 0 738309..739274 - 321 148271831 qorA CMM_0652 - putative Zn-dependant quinone oxidoreductase 654 70.29 0 739395..740333 + 312 148271832 cysK CMM_0653 - hypothetical protein 655 74.87 0 740336..740920 + 194 148271833 cysE CMM_0654 - putative serine O-acetyltransferase 656 71.21 0 740920..741579 + 219 148271834 - CMM_0655 - putative RNA methyltransferase 657 73.80 0 741611..742171 + 186 148271835 - CMM_0656 - hypothetical protein 658 73.38 0 742168..742569 - 133 148271836 - CMM_0657 - hypothetical protein 659 76.44 0 742620..743141 + 173 148271837 - CMM_0658 - putative endoribonuclease L-PSP 660 72.75 0 743160..744161 - 333 148271838 addB CMM_0659 - putative adenosine deaminase 661 74.11 0 744239..744547 + 102 148271839 - CMM_0660 - hypothetical protein 662 52.75 -2 745338..748628 + 1096 148271840 - CMM_0661 - hypothetical protein 663 68.10 -1 748784..749830 - 348 148271841 adhA CMM_0662 - NADP-dependent alcohol dehydrogenase 664 78.21 +1 749984..751369 + 461 148271842 - CMM_0663 - putative carboxylesterase, type B 665 75.26 0 751420..751908 - 162 148271843 SoxR CMM_0664 - hypothetical protein 666 68.81 -1 752015..752341 + 108 148271844 fdxA CMM_0665 - hypothetical protein 667 75.15 0 752338..752832 + 164 148271845 - CMM_0666 - putative flavin-dependant reductase 668 72.69 0 752869..754794 - 641 148271846 - CMM_0667 - putative secreted phosphoesterase 669 74.40 0 755391..756011 + 206 148271847 - CMM_0668 - putative phosphohydrolase 670 75.79 0 756008..756292 + 94 148271848 - CMM_0669 - hypothetical protein 671 76.74 +1 756289..756963 - 224 148271849 - CMM_0670 - hypothetical protein 672 74.64 0 757050..759155 - 701 148271850 - CMM_0671 - hypothetical protein 673 77.43 +1 759152..759820 - 222 148271851 - CMM_0672 - hypothetical protein 674 78.36 +1 759817..760500 - 227 148271852 - CMM_0673 - TetR family transcriptional regulator 675 75.72 0 760594..761907 - 437 148271853 - CMM_0674 - AraC family transcriptional regulator 676 73.53 0 762248..762451 + 67 148271854 - CMM_0675 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.