version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 477 78.03 +1 556093..556488 - 131 148271655 - CMM_0476 - hypothetical protein 478 78.27 +1 556485..557234 - 249 148271656 - CMM_0477 - hypothetical protein 479 72.61 0 557231..557785 - 184 148271657 sigZ CMM_0478 - putative ECF sigma factor 480 75.53 0 557918..558391 + 157 148271658 - CMM_0479 - hypothetical protein 481 76.48 0 558564..559439 + 291 148271659 - CMM_0480 - putative beta-hydroxyacid dehydrogenase 482 71.89 0 559506..560060 + 184 148271660 pyrE CMM_0481 - orotate phosphoribosyltransferase 483 78.23 +1 560060..562135 + 691 148271661 - CMM_0482 - hypothetical protein 484 76.67 0 562242..563510 + 422 148271662 - CMM_0483 - putative MFS permease 485 69.67 0 563511..564308 - 265 148271663 nagD CMM_0484 - putative N-acetylglucosamine-6-phosphate deacetylase 486 75.72 0 564438..565343 + 301 148271664 cpdA CMM_0485 - putative 3',5'-cyclic-nucleotide phosphodiesterase 487 64.33 -2 565417..565587 - 56 148271665 - CMM_0486 - hypothetical protein 488 74.29 0 565772..566191 + 139 148271666 - CMM_0487 - hypothetical protein 489 75.36 0 566280..568454 + 724 148271667 recQ2 CMM_0488 - putative ATP-dependent DNA helicase 490 72.68 0 568474..569520 - 348 148271668 - CMM_0489 - putative adenine-specific DNA-modification methylase 491 77.10 +1 569873..570955 + 360 148271669 - CMM_0490 - hypothetical protein 492 71.44 0 571114..572013 + 299 148271670 - CMM_0491 - hypothetical protein 493 74.06 0 572091..573335 + 414 148271671 - CMM_0492 - hypothetical protein 494 74.61 0 573369..574463 - 364 148271672 - CMM_0493 - putative oxidoreductase 495 77.63 +1 574662..576896 + 744 148271673 - CMM_0494 - putative sucrose synthase (sucrose-UDP glucosyltransferase) 496 75.41 0 576893..578218 + 441 148271674 - CMM_0495 - putative glycosyltransferase 497 73.02 0 578576..580291 + 571 148271675 - CMM_0496 - hypothetical protein 498 71.26 0 580291..581226 + 311 148271676 - CMM_0497 - hypothetical protein 499 71.63 0 581223..582068 + 281 148271677 - CMM_0498 - hypothetical protein 500 74.40 0 582124..583041 + 305 148271678 - CMM_0499 - putative lysophospholipase 501 76.97 +1 583038..583532 + 164 148271679 - CMM_0500 - putative acetyltransferase 502 78.06 +1 583604..586429 - 941 148271680 - CMM_0501 - hypothetical protein 503 77.26 +1 586426..588303 - 625 148271681 - CMM_0502 - serine protease 504 74.73 0 588673..589404 + 243 148271682 - CMM_0503 - TetR family transcriptional regulator 505 72.55 0 589476..591650 - 724 148271683 - CMM_0504 - putative phospholipase C 506 74.25 0 591934..592566 - 210 148271684 alkB CMM_0505 - DNA repair system specific for alkylated DNA 507 72.54 0 592631..593311 - 226 148271685 - CMM_0506 - hypothetical protein 508 70.76 0 593390..594439 + 349 148271686 lplA CMM_0507 - putative lipoate-protein ligase A 509 72.98 0 594698..594982 - 94 148271687 - CMM_0508 - putative acetyltransferase 510 72.60 0 595050..595268 - 72 148271688 - CMM_0509 - hypothetical protein 511 76.44 0 595269..595616 - 115 148271689 - CMM_0510 - hypothetical protein 512 71.24 0 595865..596761 + 298 148271690 - CMM_0511 - hypothetical protein 513 76.00 0 596758..597207 - 149 148271691 - CMM_0512 - hypothetical protein 514 71.79 0 597320..598960 - 546 148271692 pgmA CMM_0513 - phosphoglucomutase 515 73.98 0 599010..599966 + 318 148271693 pheA CMM_0514 - hypothetical protein 516 71.74 0 600028..601308 + 426 148271694 serS CMM_0515 - seryl-tRNA synthetase 517 72.14 0 601305..602126 + 273 148271695 - CMM_0516 - HAD family hydrolase 518 70.94 0 602512..603657 + 381 148271696 - CMM_0517 - LytR family transcriptional regulator 519 72.47 0 604230..604763 + 177 148271697 - CMM_0518 - hypothetical protein 520 75.00 0 604825..605892 + 355 148271698 - CMM_0519 - hypothetical protein 521 69.53 0 606062..606760 + 232 148271699 - CMM_0520 - hypothetical protein 522 73.44 0 606778..607854 + 358 148271700 - CMM_0521 - putative oxidoreductase/dehydrogenase 523 74.32 0 607946..608311 + 121 148271701 - CMM_0522 - hypothetical protein 524 74.34 0 608351..609706 - 451 148271702 - CMM_0523 - glycosy hydrolase family protein 525 72.69 0 610366..611445 - 359 148271703 - CMM_0524 - hypothetical protein 526 74.58 0 611442..611858 - 138 148271704 - CMM_0525 - PadR family transcriptional regulator 527 79.17 +1 612006..612341 + 111 148271705 - CMM_0526 - hypothetical protein 528 77.34 +1 612444..613211 + 255 148271706 - CMM_0527 - hypothetical protein 529 76.02 0 613276..614184 + 302 148271707 - CMM_0528 - putative metal-dependent hydrolase 530 74.95 0 614297..614839 + 180 148271708 - CMM_0529 - hypothetical protein 531 70.72 0 614857..615891 + 344 148271709 - CMM_0530 - putative oxidoreductase 532 75.78 0 615988..616755 + 255 148271710 plsC CMM_0531 - putative 1-acylglycerol-3-phosphate O-acyltransferase 533 73.14 0 617075..617491 - 138 148271711 panD CMM_0532 - hypothetical protein 534 70.33 0 617722..618813 + 363 148271712 - CMM_0533 - putative tRNA processing ribonuclease BN 535 72.43 0 618856..620382 - 508 148271713 phrB CMM_0534 - deoxyribodipyrimidine photo-lyase 536 76.98 +1 620529..621914 + 461 148271714 - CMM_0535 - putative glycosyl transferase 537 71.85 0 621911..622354 - 147 148271715 - CMM_0536 - MarR family transcriptional regulator 538 76.35 0 622675..623469 - 264 148271716 - CMM_0537 - putative transcriptional regulator 539 71.36 0 623866..624504 - 212 148271717 upp CMM_0538 - uracil phosphoribosyltransferase 540 78.22 +1 624573..625022 + 149 148271718 - CMM_0539 - putative cytosine/adenosine deaminase 541 76.78 +1 625050..625583 - 177 148271719 - CMM_0540 - hypothetical protein 542 75.74 0 625636..626043 + 135 148271720 - CMM_0541 - putative carboxymuconolactone decarboxylase-like protein 543 77.67 +1 626040..626948 + 302 148271721 - CMM_0542 - putative phosphotriesterase-family protein 544 69.72 0 626945..627862 - 305 148271722 - CMM_0543 - CDF family metal efflux transport protein 545 75.91 0 627994..628869 + 291 148271723 proC CMM_0544 - hypothetical protein 546 68.31 -1 628910..629578 - 222 148271724 trkA CMM_0545 - potassium uptake system NAD-binding protein 547 68.77 -1 629643..631067 - 474 148271725 trkG CMM_0546 - Trk family potassium uptake protein 548 75.23 0 631147..631695 + 182 148271726 - CMM_0547 - ArsR family transcriptional regulator 549 69.58 0 631818..632057 + 79 148271727 - CMM_0548 - putative DNA-binding protein, putative excisionase 550 75.95 0 632357..633196 - 279 148271729 serB1 CMM_0549 - putative phosphoserine phosphatase 551 73.86 0 633187..633450 + 87 148271728 - CMM_0550 - putative thioredoxin 552 72.94 0 633485..633787 + 100 148271730 - CMM_0551 - hypothetical protein 553 76.16 0 633849..634880 + 343 148271731 - CMM_0552 - LacI family transcription regulator 554 72.45 0 634993..636306 + 437 148271732 - CMM_0553 - putative sugar MFS-permease 555 76.31 0 636303..637142 + 279 148271733 - CMM_0554 - putative hydrolase 556 76.97 +1 637139..638380 + 413 148271734 - CMM_0555 - hypothetical protein 557 74.84 0 638377..639012 - 211 148271735 - CMM_0556 - hypothetical protein 558 73.15 0 639092..639307 - 71 148271736 - CMM_0557 - hypothetical protein 559 71.17 0 639386..639718 - 110 148271737 - CMM_0558 - hypothetical protein 560 77.62 +1 639896..640306 - 136 148271738 - CMM_0559 - hypothetical protein 561 72.41 0 640299..641534 - 411 148271739 - CMM_0560 - putative transcriptional regulator 562 68.27 -1 641710..643020 - 436 148271740 aspS CMM_0561 - aspartyl-tRNA synthetase 563 74.82 0 643133..643966 + 277 148271741 - CMM_0562 - hypothetical protein 564 77.29 +1 643963..644583 + 206 148271742 - CMM_0563 - putative allophanate hydrolase subunit 565 78.65 +1 644580..645497 + 305 148271743 - CMM_0564 - putative allophanate hydrolase subunit 566 73.31 0 645549..646376 - 275 148271744 - CMM_0565 - hypothetical protein 567 74.34 0 646496..648985 - 829 148271745 - CMM_0566 - putative excinuclease ABC subunit A 568 70.31 0 649537..650580 - 347 148271746 sigB CMM_0567 - putative RNA polymerase sigma 70 factor 569 73.02 0 650896..651540 + 214 148271747 - CMM_0568 - putative phosphoglycerate mutase 570 71.92 0 651540..652148 + 202 148271748 ccbD CMM_0569 - putative thioredoxin 571 71.39 0 652149..652889 + 246 148271749 ccdA CMM_0570 - cytochrome C biogenesis membrane protein 572 70.55 0 652873..654519 + 548 148271750 resB CMM_0571 - putative cytochrome C biogenesis membrane protein 573 70.86 0 654516..655541 + 341 148271751 resC CMM_0572 - putative cytochrome C-type biogenesis protein 574 75.30 0 655571..656554 - 327 148271752 menC CMM_0573 - O-succinylbenzoate synthase 575 60.97 -2 656631..657806 + 391 148271753 - CMM_0574 - putative cytosine-specific DNA methylase 576 61.16 -2 657850..658593 + 247 148271754 - CMM_0575 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.