version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 440 66.85 -1 520414..520944 - 176 148271618 padA CMM_0439 - putative phenolic acid decarboxylase 441 78.04 +1 521008..521508 + 166 148271619 - CMM_0440 - hypothetical protein 442 67.88 -1 521634..522209 + 191 148271620 - CMM_0441 - hypothetical protein 443 68.13 -1 522274..522888 + 204 148271621 - CMM_0442 - hypothetical protein 444 77.16 +1 522987..523577 - 196 148271622 - CMM_0443 - MarR family transcriptional regulator 445 69.80 0 523574..525331 - 585 148271623 - CMM_0444 - MFS family transporter 446 69.19 0 525500..525856 + 118 148271624 - CMM_0445 - hypothetical protein 447 74.74 0 525870..527021 - 383 148271625 - CMM_0446 - putative peptidase 448 73.79 0 527021..527329 - 102 148271626 - CMM_0447 - hypothetical protein 449 73.80 0 527347..527865 - 172 148271627 - CMM_0448 - hypothetical protein 450 74.09 0 527872..528774 - 300 148271628 - CMM_0449 - hypothetical protein 451 76.03 0 528865..529494 - 209 148271629 - CMM_0450 - hypothetical protein 452 70.75 0 529491..530912 - 473 148271630 - CMM_0451 - hypothetical protein 453 75.66 0 531050..531616 - 188 148271631 - CMM_0452 - putative acetyltransferase 454 70.77 0 531745..532962 + 405 148271632 pitA CMM_0453 - low affinity phosphate permease 455 73.08 0 532974..533285 + 103 148271633 - CMM_0454 - hypothetical protein 456 76.79 +1 533288..533998 + 236 148271634 - CMM_0455 - hypothetical protein 457 74.51 0 534030..534233 - 67 148271635 - CMM_0456 - hypothetical protein 458 73.30 0 534450..535112 + 220 148271636 - CMM_0457 - TetR family transcriptional regulator 459 70.31 0 535109..536812 + 567 148271637 - CMM_0458 - MFS-type efflux permease 460 74.55 0 536932..537375 + 147 148271638 - CMM_0459 - hypothetical protein 461 74.45 0 537372..539066 - 564 148271639 - CMM_0460 - hypothetical protein 462 70.11 0 539259..540188 + 309 148271640 - CMM_0461 - permease AEC family 463 72.33 0 540201..540359 - 52 148271641 - CMM_0462 - hypothetical protein 464 75.68 0 540498..540974 - 158 148271642 - CMM_0463 - putative acetyltransferase 465 77.50 +1 541062..542021 - 319 148271643 - CMM_0464 - hypothetical protein 466 76.03 0 542537..543241 - 234 148271644 - CMM_0465 - hypothetical protein 467 74.55 0 543275..544162 - 295 148271645 - CMM_0466 - hypothetical protein 468 73.52 0 544172..544609 - 145 148271646 - CMM_0467 - hypothetical protein 469 64.66 -2 544648..544995 - 115 148271647 - CMM_0468 - hypothetical protein 470 69.53 0 545154..546062 + 302 148271648 - CMM_0469 - putative oxidoreductase 471 77.07 +1 546093..546659 - 188 148271649 - CMM_0470 - hypothetical protein 472 71.55 0 546768..548468 + 566 148271650 - CMM_0471 - putative two-component sensor histidine kinase 473 77.97 +1 548510..549385 + 291 148271651 - CMM_0472 - hypothetical protein 474 75.29 0 549618..550475 - 285 148271652 - CMM_0473 - putative two-component system response regulator 475 76.70 0 550605..551192 - 195 148271653 - CMM_0474 - hypothetical protein 476 70.97 0 551281..552117 - 278 148271654 xthB CMM_0475 - putative exonuclease III 477 78.03 +1 556093..556488 - 131 148271655 - CMM_0476 - hypothetical protein 478 78.27 +1 556485..557234 - 249 148271656 - CMM_0477 - hypothetical protein 479 72.61 0 557231..557785 - 184 148271657 sigZ CMM_0478 - putative ECF sigma factor 480 75.53 0 557918..558391 + 157 148271658 - CMM_0479 - hypothetical protein 481 76.48 0 558564..559439 + 291 148271659 - CMM_0480 - putative beta-hydroxyacid dehydrogenase 482 71.89 0 559506..560060 + 184 148271660 pyrE CMM_0481 - orotate phosphoribosyltransferase 483 78.23 +1 560060..562135 + 691 148271661 - CMM_0482 - hypothetical protein 484 76.67 0 562242..563510 + 422 148271662 - CMM_0483 - putative MFS permease 485 69.67 0 563511..564308 - 265 148271663 nagD CMM_0484 - putative N-acetylglucosamine-6-phosphate deacetylase 486 75.72 0 564438..565343 + 301 148271664 cpdA CMM_0485 - putative 3',5'-cyclic-nucleotide phosphodiesterase 487 64.33 -2 565417..565587 - 56 148271665 - CMM_0486 - hypothetical protein 488 74.29 0 565772..566191 + 139 148271666 - CMM_0487 - hypothetical protein 489 75.36 0 566280..568454 + 724 148271667 recQ2 CMM_0488 - putative ATP-dependent DNA helicase 490 72.68 0 568474..569520 - 348 148271668 - CMM_0489 - putative adenine-specific DNA-modification methylase 491 77.10 +1 569873..570955 + 360 148271669 - CMM_0490 - hypothetical protein 492 71.44 0 571114..572013 + 299 148271670 - CMM_0491 - hypothetical protein 493 74.06 0 572091..573335 + 414 148271671 - CMM_0492 - hypothetical protein 494 74.61 0 573369..574463 - 364 148271672 - CMM_0493 - putative oxidoreductase 495 77.63 +1 574662..576896 + 744 148271673 - CMM_0494 - putative sucrose synthase (sucrose-UDP glucosyltransferase) 496 75.41 0 576893..578218 + 441 148271674 - CMM_0495 - putative glycosyltransferase 497 73.02 0 578576..580291 + 571 148271675 - CMM_0496 - hypothetical protein 498 71.26 0 580291..581226 + 311 148271676 - CMM_0497 - hypothetical protein 499 71.63 0 581223..582068 + 281 148271677 - CMM_0498 - hypothetical protein 500 74.40 0 582124..583041 + 305 148271678 - CMM_0499 - putative lysophospholipase 501 76.97 +1 583038..583532 + 164 148271679 - CMM_0500 - putative acetyltransferase 502 78.06 +1 583604..586429 - 941 148271680 - CMM_0501 - hypothetical protein 503 77.26 +1 586426..588303 - 625 148271681 - CMM_0502 - serine protease 504 74.73 0 588673..589404 + 243 148271682 - CMM_0503 - TetR family transcriptional regulator 505 72.55 0 589476..591650 - 724 148271683 - CMM_0504 - putative phospholipase C 506 74.25 0 591934..592566 - 210 148271684 alkB CMM_0505 - DNA repair system specific for alkylated DNA 507 72.54 0 592631..593311 - 226 148271685 - CMM_0506 - hypothetical protein 508 70.76 0 593390..594439 + 349 148271686 lplA CMM_0507 - putative lipoate-protein ligase A 509 72.98 0 594698..594982 - 94 148271687 - CMM_0508 - putative acetyltransferase 510 72.60 0 595050..595268 - 72 148271688 - CMM_0509 - hypothetical protein 511 76.44 0 595269..595616 - 115 148271689 - CMM_0510 - hypothetical protein 512 71.24 0 595865..596761 + 298 148271690 - CMM_0511 - hypothetical protein 513 76.00 0 596758..597207 - 149 148271691 - CMM_0512 - hypothetical protein 514 71.79 0 597320..598960 - 546 148271692 pgmA CMM_0513 - phosphoglucomutase 515 73.98 0 599010..599966 + 318 148271693 pheA CMM_0514 - hypothetical protein 516 71.74 0 600028..601308 + 426 148271694 serS CMM_0515 - seryl-tRNA synthetase 517 72.14 0 601305..602126 + 273 148271695 - CMM_0516 - HAD family hydrolase 518 70.94 0 602512..603657 + 381 148271696 - CMM_0517 - LytR family transcriptional regulator 519 72.47 0 604230..604763 + 177 148271697 - CMM_0518 - hypothetical protein 520 75.00 0 604825..605892 + 355 148271698 - CMM_0519 - hypothetical protein 521 69.53 0 606062..606760 + 232 148271699 - CMM_0520 - hypothetical protein 522 73.44 0 606778..607854 + 358 148271700 - CMM_0521 - putative oxidoreductase/dehydrogenase 523 74.32 0 607946..608311 + 121 148271701 - CMM_0522 - hypothetical protein 524 74.34 0 608351..609706 - 451 148271702 - CMM_0523 - glycosy hydrolase family protein 525 72.69 0 610366..611445 - 359 148271703 - CMM_0524 - hypothetical protein 526 74.58 0 611442..611858 - 138 148271704 - CMM_0525 - PadR family transcriptional regulator 527 79.17 +1 612006..612341 + 111 148271705 - CMM_0526 - hypothetical protein 528 77.34 +1 612444..613211 + 255 148271706 - CMM_0527 - hypothetical protein 529 76.02 0 613276..614184 + 302 148271707 - CMM_0528 - putative metal-dependent hydrolase 530 74.95 0 614297..614839 + 180 148271708 - CMM_0529 - hypothetical protein 531 70.72 0 614857..615891 + 344 148271709 - CMM_0530 - putative oxidoreductase 532 75.78 0 615988..616755 + 255 148271710 plsC CMM_0531 - putative 1-acylglycerol-3-phosphate O-acyltransferase 533 73.14 0 617075..617491 - 138 148271711 panD CMM_0532 - hypothetical protein 534 70.33 0 617722..618813 + 363 148271712 - CMM_0533 - putative tRNA processing ribonuclease BN 535 72.43 0 618856..620382 - 508 148271713 phrB CMM_0534 - deoxyribodipyrimidine photo-lyase 536 76.98 +1 620529..621914 + 461 148271714 - CMM_0535 - putative glycosyl transferase 537 71.85 0 621911..622354 - 147 148271715 - CMM_0536 - MarR family transcriptional regulator 538 76.35 0 622675..623469 - 264 148271716 - CMM_0537 - putative transcriptional regulator 539 71.36 0 623866..624504 - 212 148271717 upp CMM_0538 - uracil phosphoribosyltransferase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.