version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 343 76.53 0 416625..416999 - 124 148271521 - CMM_0342 - hypothetical protein 344 70.55 0 417181..417618 - 145 148271522 - CMM_0343 - putative alkaline shock protein 345 76.14 0 417819..419000 - 393 148271523 - CMM_0344 - AraC family transcriptional regulator 346 70.91 0 419162..420103 - 313 148271524 - CMM_0345 - hypothetical protein 347 73.48 0 420329..420871 - 180 148271525 - CMM_0346 - hypothetical protein 348 72.57 0 421093..424278 - 1061 148271526 manX CMM_0347 - putative alpha-mannosidase 349 73.59 0 424342..425685 - 447 148271527 bglY CMM_0348 - putative 6-phospho-beta-glucosidase 350 73.28 0 425682..426407 - 241 148271528 - CMM_0349 - DeoR family transcriptional regulator 351 77.71 +1 426635..427657 + 340 148271529 - CMM_0350 - putative carbohydrate kinase 352 70.47 0 427733..429019 + 428 148271530 - CMM_0351 - putative sugar ABC transporter, substrate binding protein 353 67.97 -1 429016..430014 + 332 148271531 - CMM_0352 - putative sugar ABC transporter, permease component 354 68.29 -1 430011..430934 + 307 148271532 - CMM_0353 - putative sugar ABC transporter, permease component 355 78.04 +1 430931..431695 + 254 148271533 nagB CMM_0354 - putative glucosamine-6-phosphate isomerase 356 75.69 0 431769..434759 + 996 148271534 bgaA CMM_0355 - beta-galactosidase 357 72.09 0 434829..435344 - 171 148271535 - CMM_0356 - putative acyl-CoA thioesterase 358 69.46 0 435599..436171 + 190 148271536 - CMM_0357 - hypothetical protein 359 74.95 0 436334..437383 + 349 148271537 - CMM_0358 - LacI family transcriptional regulator 360 70.78 0 437577..438791 + 404 148271538 - CMM_0359 - putative sugar ABC transporter, substrate-binding protein 361 69.48 0 438788..439747 + 319 148271539 - CMM_0360 - putative sugar ABC transporter, permease component 362 67.75 -1 439744..440574 + 276 148271540 - CMM_0361 - putative sugar ABC transporter, permease component 363 71.99 0 440654..442702 + 682 148271541 - CMM_0362 - putative alpha glucosidase 364 72.06 0 442816..443871 + 351 148271542 - CMM_0363 - putative Fe3+-hydroxamate ABC transporter,substrate binding protein 365 74.93 0 443868..444944 + 358 148271543 - CMM_0364 - putative Fe3+-siderophore ABC transporter,permease component 366 75.36 0 444941..445711 + 256 148271544 - CMM_0365 - putative Fe3+-siderophore ABC transporter,ATPase component 367 74.16 0 445786..446586 + 266 148271545 - CMM_0366 - putative nucleoside-diphosphate-sugar epimerase 368 70.37 0 446742..447713 + 323 148271546 phnD CMM_0367 - putative phosphonate ABC transporter, substrate-binding protein 369 74.56 0 447735..448634 + 299 148271547 phnC CMM_0368 - putative phosphate/phosphonate ABC transporter,ATPase component 370 73.81 0 448631..450379 + 582 148271548 phnE CMM_0369 - putative phosphate/phosphonate ABC transporter,permease component 371 78.52 +1 450376..451269 + 297 148271549 panE CMM_0370 - 2-dehydropantoate 2-reductase 372 71.36 0 451286..451903 - 205 148271550 phnX CMM_0371 - putative acetyltransferase 373 80.59 +1 451900..452610 - 236 148271551 phnN CMM_0372 - hypothetical protein 374 75.30 0 452607..453788 - 393 148271552 phnM CMM_0373 - putative metal-dependent hydrolase involved in phosphonate metabolism 375 78.71 +1 453785..454531 - 248 148271553 phnV CMM_0374 - hypothetical protein 376 75.36 0 454528..455286 - 252 148271554 phnL CMM_0375 - putative phosphonate ABC transporter, ATPase 377 72.18 0 455283..456062 - 259 148271555 phnK CMM_0376 - phosphonates transport ATP-binding protein 378 70.34 0 456059..456928 - 289 148271556 phnJ CMM_0377 - putative C-P (carbon-phosphorus) lyase 379 74.82 0 456925..458040 - 371 148271557 phnI CMM_0378 - hypothetical protein 380 79.94 +1 458040..458687 - 215 148271558 phnH CMM_0379 - putative C-P (carbon-phosphorus) lyase component 381 76.42 0 458684..459175 - 163 148271559 phnG CMM_0380 - putative C-P (carbon-phosphorus lyase component 382 74.66 0 459383..460120 + 245 148271560 phnF CMM_0381 - GntR family transcriptional regulator 383 74.79 0 460220..461437 + 405 148271561 - CMM_0382 - putative multidrug efflux MFS permease 384 74.75 0 461542..464274 + 910 148271562 ppcA CMM_0383 - hypothetical protein 385 70.24 0 464495..464998 - 167 148271563 - CMM_0384 - Cro/CI family transcriptional regulator 386 73.24 0 465146..466255 - 369 148271564 ltaE CMM_0385 - putative L-threonine aldolase 387 72.60 0 466292..466948 - 218 148271565 - CMM_0386 - putative NTP pyrophosphohydrolase 388 73.44 0 467019..468287 - 422 148271566 - CMM_0387 - putative NAD(FAD)-dependent dehydrogenase 389 71.14 0 468608..469054 + 148 148271567 - CMM_0388 - putative alkaline shock protein 390 74.24 0 469277..470095 + 272 148271568 aqpZ CMM_0389 - hypothetical protein 391 77.00 +1 470190..471176 + 328 148271569 - CMM_0390 - hypothetical protein 392 72.60 0 471212..471784 - 190 148271570 - CMM_0391 - hypothetical protein 393 71.08 0 471875..472327 - 150 148271571 - CMM_0392 - hypothetical protein 394 69.54 0 472374..473138 - 254 148271572 - CMM_0393 - hypothetical protein 395 70.62 0 473188..474225 - 345 148271573 - CMM_0394 - hypothetical protein 396 72.22 0 474322..474789 - 155 148271574 - CMM_0395 - hypothetical protein 397 69.75 0 474786..475919 - 377 148271575 - CMM_0396 - putative Na+ efflux ABC transporter, permease component 398 71.09 0 475916..476797 - 293 148271576 - CMM_0397 - putative ABC transporter, ATP-binding protein 399 76.22 0 476999..477448 + 149 148271577 - CMM_0398 - hypothetical protein 400 74.28 0 477439..478344 - 301 148271578 - CMM_0399 - hypothetical protein 401 73.21 0 478341..479135 - 264 148271579 - CMM_0400 - putative short chain dehydrogenase 402 76.50 0 479188..479970 + 260 148271580 - CMM_0401 - putative short-chain alcohol dehydrogenase 403 72.00 0 479989..480438 - 149 148271581 - CMM_0402 - hypothetical protein 404 71.24 0 480919..482340 + 473 148271582 glpT CMM_0403 - putative glycerol-3-phosphate MFS permease 405 74.39 0 482363..483100 - 245 148271583 - CMM_0404 - putative two-component system response regulator 406 74.40 0 483097..484506 - 469 148271584 - CMM_0405 - putative two-component system, sensor kinase 407 72.44 0 484813..486405 + 530 148271585 - CMM_0406 - putative drug efflux MFS permease 408 77.27 +1 486491..487339 - 282 148271586 - CMM_0407 - alpha/beta fold family hydrolase 409 77.12 +1 487427..488134 + 235 148271587 - CMM_0408 - hypothetical protein 410 72.55 0 488148..488861 - 237 148271588 - CMM_0409 - putative oxidoreductase 411 76.43 0 488994..489413 + 139 148271589 - CMM_0410 - MerR family transcriptional regulator 412 68.58 -1 489604..490074 + 156 148271590 - CMM_0411 - hypothetical protein 413 65.56 -1 490088..490267 + 59 148271591 - CMM_0412 - hypothetical protein 414 73.00 0 490374..490736 - 120 148271592 - CMM_0413 - hypothetical protein 415 75.05 0 490826..491362 + 178 148271593 - CMM_0414 - MarR family transcriptional regulator 416 72.34 0 491439..491861 + 140 148271594 osmC CMM_0415 - organic hydroperoxide resistance protein 417 73.04 0 491861..492268 + 135 148271595 - CMM_0416 - hypothetical protein 418 71.76 0 492406..492837 + 143 148271596 - CMM_0417 - hypothetical protein 419 74.34 0 492847..493980 - 377 148271597 - CMM_0418 - putative epoxide hydrolase 420 65.53 -1 493997..495226 - 409 148271598 - CMM_0419 - hypothetical protein 421 71.20 0 495310..496368 - 352 148271599 - CMM_0420 - putative sugar ABC transporter, membrane spanning protein 422 71.65 0 496365..497447 - 360 148271600 - CMM_0421 - putative sugar ABC transporter, permease component 423 71.43 0 497444..499018 - 524 148271601 - CMM_0422 - putative sugar ABC transporter, ATPase component 424 69.55 0 499112..500116 - 334 148271602 - CMM_0423 - putative sugar ABC transporter, binding protein 425 74.79 0 500283..501956 - 557 148271603 - CMM_0424 - putative sugar uptake ABC transporter, ATPase component 426 73.51 0 502082..503104 - 340 148271604 - CMM_0425 - LacI family transcription regulator 427 69.07 0 503366..504322 + 318 148271605 - CMM_0426 - manganese-containing catalase 428 71.75 0 506213..506389 + 58 148271606 - CMM_0427 - hypothetical protein 429 70.60 0 506602..509040 + 812 148271607 - CMM_0428 - putative phosphoketolase 430 75.60 0 509091..509840 - 249 148271608 - CMM_0429 - hypothetical protein 431 74.82 0 509932..511758 - 608 148271609 - CMM_0430 - hypothetical protein 432 74.83 0 511928..514192 - 754 148271610 - CMM_0431 - putative hemagglutinin/hemolysin-related protein 433 71.95 0 514407..515069 + 220 148271611 - CMM_0432 - hypothetical protein 434 76.65 0 515083..516114 - 343 148271612 fepG CMM_0433 - putative iron-siderophore ABC transporter,permease component 435 77.18 +1 516111..517118 - 335 148271613 fepD CMM_0434 - putative iron-siderophore ABC transporter,permease component 436 75.49 0 517149..518225 + 358 148271614 fepB CMM_0435 - putative iron-siderophore ABC transporter,binding protein 437 77.20 +1 518235..518756 - 173 148271615 - CMM_0436 - putative acetyltransferase 438 74.27 0 518809..519558 + 249 148271616 - CMM_0437 - putative SAM-dependant methyltransferase 439 77.69 +1 519626..520414 - 262 148271617 - CMM_0438 - putative hydrolase 440 66.85 -1 520414..520944 - 176 148271618 padA CMM_0439 - putative phenolic acid decarboxylase 441 78.04 +1 521008..521508 + 166 148271619 - CMM_0440 - hypothetical protein 442 67.88 -1 521634..522209 + 191 148271620 - CMM_0441 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.