version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 260 77.14 +1 322313..322837 + 174 148271438 crcB1 CMM_0259 - putative membrane protein involved in chromosome condensation 261 76.38 0 322834..323214 + 126 148271439 crcB2 CMM_0260 - putative membrane protein involved in chromosome condensation 262 78.20 +1 323211..323687 + 158 148271440 - CMM_0261 - putative acetyltransferase 263 76.19 0 323697..324284 + 195 148271441 - CMM_0262 - putative NTP pyrophosphohydrolases 264 76.49 0 324294..325301 - 335 148271442 ddlA CMM_0263 - putative D-alanine--D-alanine ligase 265 77.22 +1 325348..326058 - 236 148271443 - CMM_0264 - hypothetical protein 266 70.99 0 326061..326615 - 184 148271444 - CMM_0265 - hypothetical protein 267 71.21 0 326881..328224 + 447 148271445 - CMM_0266 - hypothetical protein 268 74.71 0 328221..329078 + 285 148271446 - CMM_0267 - RpiR family transcriptional regulator 269 77.25 +1 329139..330083 + 314 148271447 - CMM_0268 - putative hydroxyacid dehydrogenase 270 75.27 0 330080..331660 + 526 148271448 - CMM_0269 - putative aldehyde dehydrogenase 271 70.22 0 331874..333112 + 412 148271449 - CMM_0270 - putative sugar ABC transporter, substrate binding protein 272 68.79 -1 333112..334101 + 329 148271450 - CMM_0271 - putative sugar ABC transporter, permease component 273 69.63 0 334094..334969 + 291 148271451 - CMM_0272 - putative sugar ABC transporter, permease component 274 70.17 0 335052..335822 + 256 148271452 - CMM_0273 - trehalose utilization-related protein 275 75.85 0 335819..337048 + 409 148271453 - CMM_0274 - putative dehydrogenase 276 77.40 +1 337069..338382 + 437 148271454 - CMM_0275 - ROK family transcriptional regulator 277 74.12 0 338379..339035 + 218 148271455 - CMM_0276 - hypothetical protein 278 76.95 +1 339073..340074 - 333 148271456 - CMM_0277 - hypothetical protein 279 76.65 0 340257..340847 + 196 148271457 - CMM_0278 - putative chorismate mutase 280 75.22 0 340959..341297 - 112 148271458 - CMM_0279 - hypothetical protein 281 73.78 0 341356..341847 - 163 148271459 - CMM_0280 - hypothetical protein 282 75.72 0 342105..342899 - 264 148271460 - CMM_0281 - putative acetyltransferase 283 77.69 +1 342905..345463 - 852 148271461 - CMM_0282 - hypothetical protein 284 74.45 0 345561..346151 + 196 148271462 - CMM_0283 - putative adenylate kinase 285 76.87 +1 346118..346705 - 195 148271463 - CMM_0284 - hypothetical protein 286 76.96 +1 346723..347499 - 258 148271464 - CMM_0285 - permease DMT family 287 74.64 0 347748..348374 + 208 148271465 - CMM_0286 - TetR family transcriptional regulator 288 74.90 0 348371..348868 + 165 148271466 - CMM_0287 - diadenosine tetraphosphate hydrolase 289 73.39 0 348940..349608 + 222 148271467 - CMM_0288 - putative oxidoreductase 290 71.28 0 349694..350386 - 230 148271468 - CMM_0289 - hypothetical protein 291 73.77 0 350578..351084 + 168 148271469 sigL CMM_0290 - RNA polymerase ECF-subfamily sigma factor 292 76.39 0 351081..351872 + 263 148271470 - CMM_0291 - hypothetical protein 293 72.42 0 352171..352761 - 196 148271471 - CMM_0292 - hypothetical protein 294 70.25 0 352835..354202 + 455 148271472 - CMM_0293 - putative MFS permease 295 76.39 0 354199..354702 - 167 148271473 - CMM_0294 - hypothetical protein 296 74.18 0 354731..355741 - 336 148271474 - CMM_0295 - LacI family transcriptional regulator 297 69.45 0 355969..357261 + 430 148271475 - CMM_0296 - putative sugar ABC transporter, substrate-binding protein 298 67.54 -1 357272..358297 + 341 148271476 - CMM_0297 - putative sugar ABC transporter, permease component 299 67.33 -1 358294..359199 + 301 148271477 - CMM_0298 - putative sugar ABC transporter, permease component 300 75.31 0 359196..361577 + 793 148271478 bglX CMM_0299 - putative beta-glycosidase 301 78.21 +1 361717..362565 - 282 148271479 - CMM_0300 - putative nucleoside-diphosphate-sugar epimerase 302 79.07 +1 362661..363410 + 249 148271480 - CMM_0301 - TetR family transcriptional regulator 303 75.29 0 363450..364307 - 285 148271481 - CMM_0302 - Cro/CI family transcriptional regulator 304 72.25 0 364409..365089 + 226 148271482 - CMM_0303 - short chain oxidoreductase 305 75.94 0 365157..365555 + 132 148271483 - CMM_0304 - hypothetical protein 306 75.49 0 365594..366160 + 188 148271484 - CMM_0305 - hypothetical protein 307 74.83 0 366519..367412 + 297 148271485 - CMM_0306 - hypothetical protein 308 75.85 0 367435..367848 - 137 148271486 - CMM_0307 - putative sulfurtransferase 309 73.27 0 368106..369347 + 413 148271487 - CMM_0308 - hypothetical protein 310 75.47 0 369387..369920 - 177 148271488 - CMM_0309 - hypothetical protein 311 69.65 0 370093..371634 + 513 148271489 abfA1 CMM_0310 - hypothetical protein 312 73.52 0 371722..371940 - 72 148271490 - CMM_0311 - hypothetical protein 313 74.28 0 372277..372867 - 196 148271491 - CMM_0312 - putative acetyltransferase 314 76.61 0 372914..373255 - 113 148271492 - CMM_0313 - hypothetical protein 315 77.65 +1 373355..374428 + 357 148271493 - CMM_0314 - hypothetical protein 316 77.45 +1 374511..375521 + 336 148271494 - CMM_0315 - putative thioredoxin reductase 317 71.73 0 375588..377780 + 730 148271495 clpY CMM_0316 - ATPase with chaperone activity, ATP-binding subunit 318 74.31 0 377847..380030 - 727 148271496 agaA CMM_0317 - hypothetical protein 319 72.92 0 380141..380620 + 159 148271497 - CMM_0318 - putative transcriptional regulator 320 74.17 0 380682..381347 - 221 148271498 - CMM_0319 - hypothetical protein 321 76.64 0 381414..381764 - 116 148271499 - CMM_0320 - hypothetical protein 322 71.64 0 381880..382884 + 334 148271500 - CMM_0321 - putative oxidoreductase 323 77.25 +1 382892..384100 + 402 148271501 - CMM_0322 - putative dipeptidase 324 79.98 +1 384097..384960 + 287 148271502 - CMM_0323 - GNAT family acetyltransferase 325 77.85 +1 384894..386636 - 580 148271503 - CMM_0324 - putative ABC transporter (fused permease/ATPase) 326 77.98 +1 386636..388456 - 606 148271504 - CMM_0325 - putative ABC transporter (fused permease/ATPase) 327 77.17 +1 388453..389223 - 256 148271505 - CMM_0326 - hypothetical protein 328 78.72 +1 389220..390032 - 270 148271506 - CMM_0327 - putative thioesterase 329 79.47 +1 390130..392058 - 642 148271507 - CMM_0328 - putative oxidoreductase/methylase 330 78.18 +1 392055..393200 - 381 148271508 - CMM_0329 - putative dehydrogenase, iron-regulated protein 331 76.90 +1 393197..398776 - 1859 148271509 npsB CMM_0330 - non-ribosomal peptide synthetase 332 78.53 +1 398773..405660 - 2295 148271510 npsA CMM_0331 - non-ribosomal peptide synthetase 333 77.84 +1 405761..407479 + 572 148271511 - CMM_0332 - hypothetical protein 334 79.31 +1 407472..408191 + 239 148271512 - CMM_0333 - 4-phosphopantetheinyl transferase 335 77.64 +1 408202..409668 + 488 148271513 - CMM_0334 - putative organic acid synthase 336 75.87 0 409681..411495 - 604 148271514 - CMM_0335 - hypothetical protein 337 77.62 +1 411488..411898 - 136 148271515 - CMM_0336 - hypothetical protein 338 75.97 0 411935..413278 - 447 148271516 - CMM_0337 - hypothetical protein 339 72.37 0 413447..414691 - 414 148271517 - CMM_0338 - hypothetical protein 340 77.27 +1 414897..415358 - 153 148271518 - CMM_0339 - hypothetical protein 341 74.42 0 415448..416053 - 201 148271519 - CMM_0340 - hypothetical protein 342 73.40 0 416050..416628 - 192 148271520 - CMM_0341 - hypothetical protein 343 76.53 0 416625..416999 - 124 148271521 - CMM_0342 - hypothetical protein 344 70.55 0 417181..417618 - 145 148271522 - CMM_0343 - putative alkaline shock protein 345 76.14 0 417819..419000 - 393 148271523 - CMM_0344 - AraC family transcriptional regulator 346 70.91 0 419162..420103 - 313 148271524 - CMM_0345 - hypothetical protein 347 73.48 0 420329..420871 - 180 148271525 - CMM_0346 - hypothetical protein 348 72.57 0 421093..424278 - 1061 148271526 manX CMM_0347 - putative alpha-mannosidase 349 73.59 0 424342..425685 - 447 148271527 bglY CMM_0348 - putative 6-phospho-beta-glucosidase 350 73.28 0 425682..426407 - 241 148271528 - CMM_0349 - DeoR family transcriptional regulator 351 77.71 +1 426635..427657 + 340 148271529 - CMM_0350 - putative carbohydrate kinase 352 70.47 0 427733..429019 + 428 148271530 - CMM_0351 - putative sugar ABC transporter, substrate binding protein 353 67.97 -1 429016..430014 + 332 148271531 - CMM_0352 - putative sugar ABC transporter, permease component 354 68.29 -1 430011..430934 + 307 148271532 - CMM_0353 - putative sugar ABC transporter, permease component 355 78.04 +1 430931..431695 + 254 148271533 nagB CMM_0354 - putative glucosamine-6-phosphate isomerase 356 75.69 0 431769..434759 + 996 148271534 bgaA CMM_0355 - beta-galactosidase 357 72.09 0 434829..435344 - 171 148271535 - CMM_0356 - putative acyl-CoA thioesterase 358 69.46 0 435599..436171 + 190 148271536 - CMM_0357 - hypothetical protein 359 74.95 0 436334..437383 + 349 148271537 - CMM_0358 - LacI family transcriptional regulator 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0