version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2856 79.38 +1 3177707..3178060 + 117 148274034 - CMM_2850 - hypothetical protein 2857 76.90 +1 3178108..3178713 + 201 148274035 - CMM_2851 - hypothetical protein 2858 72.22 0 3178770..3179507 + 245 148274036 - CMM_2852 - ZIP family zinc transporter, 2859 77.48 +1 3179562..3180116 - 184 148274037 - CMM_2853 - MarR family transcriptional regulator 2860 75.83 0 3180258..3182069 + 603 148274038 - CMM_2854 - hypothetical protein 2861 76.93 +1 3182066..3183478 + 470 148274039 - CMM_2855 - multidrug exporter MOPMATE family membrane protein 2862 74.56 0 3183494..3184354 - 286 148274040 - CMM_2856 - putative aldo/keto reductase 2863 74.38 0 3184406..3184846 - 146 148274041 - CMM_2857 - hypothetical protein 2864 76.67 0 3184856..3185875 - 339 148274042 - CMM_2858 - S-isoprenylcysteine methyltransferase-like protein 2865 75.19 0 3185872..3186387 - 171 148274043 - CMM_2859 - hypothetical protein 2866 74.12 0 3186445..3186981 + 178 148274044 - CMM_2860 - hypothetical protein 2867 75.76 0 3187048..3187608 + 186 148274045 - CMM_2861 - putative acetyltransferase 2868 77.65 +1 3187605..3188123 - 172 148274046 - CMM_2862 - putative acetyltransferase 2869 75.21 0 3188177..3188785 + 202 148274047 - CMM_2863 - hypothetical protein 2870 74.39 0 3188818..3189879 + 353 148274048 - CMM_2864 - membrane protein, putative DMT transporter 2871 70.98 0 3189889..3190584 + 231 148274049 - CMM_2865 - hypothetical protein 2872 74.44 0 3190640..3191359 + 239 148274050 - CMM_2866 - putative hydrolase 2873 70.78 0 3191473..3191934 + 153 148274051 - CMM_2867 - MarR family transcriptional regulator 2874 76.78 +1 3191994..3192863 + 289 148274052 - CMM_2868 - putative membrane-bound Zn-dependent protease 2875 75.41 0 3193115..3194224 + 369 148274053 - CMM_2869 - hypothetical protein 2876 76.54 0 3194287..3194934 + 215 148274054 - CMM_2870 - hypothetical protein 2877 76.39 0 3194955..3196445 - 496 148274055 pgaA CMM_2871 - hypothetical protein 2878 76.47 0 3196563..3197429 - 288 148274056 - CMM_2872 - putative hydrolase/acyltransferase 2879 70.49 0 3197579..3198913 + 444 148274057 - CMM_2873 - diaminobutyrate--2-oxoglutarate aminotransferase 2880 71.84 0 3198968..3199315 - 115 148274058 - CMM_2874 - hypothetical protein 2881 73.29 0 3199354..3199821 - 155 148274059 - CMM_2875 - hypothetical protein 2882 76.02 0 3199850..3200512 - 220 148274060 - CMM_2876 - putative two-component system, response regulator 2883 77.41 +1 3200509..3202332 - 607 148274061 - CMM_2877 - putative two-component system, sensor kinase 2884 70.87 0 3202468..3203919 + 483 148274062 - CMM_2878 - citrate transporter 2885 73.47 0 3204043..3205512 - 489 148274063 - CMM_2879 - hypothetical protein 2886 74.77 0 3205613..3206044 - 143 148274064 - CMM_2880 - hypothetical protein 2887 78.07 +1 3206148..3207173 + 341 148274065 - CMM_2881 - LysR family transcriptional regulator 2888 73.50 0 3207204..3207935 - 243 148274066 - CMM_2882 - hypothetical protein 2889 73.28 0 3208085..3208432 + 115 148274067 - CMM_2883 - hypothetical protein 2890 70.01 0 3208462..3209358 - 298 148274068 ubiA CMM_2884 - prenyltransferase 2891 64.77 -2 3209351..3209719 - 122 148274069 crtY2 CMM_2885 - putative C50 carotenoid epsilon cyclase 2892 68.41 -1 3209716..3210060 - 114 148274070 crtY1 CMM_2886 - putative C50 carotenoid epsilon cyclase 2893 73.28 0 3210060..3212705 - 881 148274071 crtBI CMM_2887 - putative bifunctional phytoene synthase/phytoene dehydrogenase 2894 72.73 0 3212702..3213724 - 340 148274072 crtE CMM_2888 - putative geranylgeranyl pyrophosphate synthase 2895 73.16 0 3213817..3214401 + 194 148274073 idiA CMM_2889 - isopentenyl-diphosphate delta-isomerase 2896 74.18 0 3214474..3215352 - 292 148274074 - CMM_2890 - putative phospholipase 2897 79.83 +1 3215480..3216064 - 194 148274075 - CMM_2891 - MarR family transcriptional regulator 2898 75.13 0 3216142..3218220 + 692 148274076 - CMM_2892 - RND family transporter 2899 73.17 0 3218297..3219049 + 250 148274077 - CMM_2893 - putative short chain dehydrogenase/oxidoreductase 2900 79.15 +1 3219046..3219654 - 202 148274078 - CMM_2894 - TetR family transcriptional regulator 2901 75.87 0 3219715..3220203 + 162 148274079 - CMM_2895 - hypothetical protein 2902 72.58 0 3220506..3221165 - 219 148274080 - CMM_2896 - hypothetical protein 2903 71.12 0 3221309..3222004 - 231 148274081 - CMM_2897 - hypothetical protein 2904 71.68 0 3222082..3223197 - 371 148274082 aldA CMM_2898 - putative L-alanine dehydrogenase 2905 72.53 0 3223363..3223857 + 164 148274083 - CMM_2899 - leucine-responsive regulatory protein 2906 67.66 -1 3223871..3224476 - 201 148274084 dcd CMM_2900 - deoxycytidine triphosphate deaminase 2907 52.13 -2 3224825..3227245 + 806 148274085 - CMM_2901 - hypothetical protein 2908 60.46 -2 3228028..3228462 - 144 148274086 - CMM_2902 - hypothetical protein 2909 70.24 0 3228643..3229398 + 251 148274087 - CMM_2903 - putative ABC transporter, ATP-binding protein 2910 71.59 0 3229398..3230696 + 432 148274088 - CMM_2904 - hypothetical protein 2911 72.76 0 3230693..3231316 + 207 148274089 - CMM_2905 - hypothetical protein 2912 73.20 0 3231313..3232077 - 254 148274090 - CMM_2906 - GntR family transcriptional regulator 2913 71.68 0 3232226..3232744 + 172 148274091 gntK CMM_2907 - putative gluconokinase 2914 69.45 0 3232827..3234227 + 466 148274092 gntP CMM_2908 - gluconate permease 2915 78.30 +1 3234224..3234799 - 191 148274093 - CMM_2909 - putative pyridoxamine 5-phosphate oxidase 2916 77.04 +1 3234844..3235653 - 269 148274094 - CMM_2910 - putative DNA glycosylase/endonuclease VIII 2917 70.35 0 3235699..3236730 - 343 148274095 - CMM_2911 - hypothetical protein 2918 72.02 0 3237001..3237747 + 248 148274096 - CMM_2912 - putative short-chain dehydrogenase/oxidoreductase 2919 75.22 0 3237806..3238822 + 338 148274097 - CMM_2913 - putative oxidoreductase 2920 72.01 0 3238887..3239504 + 205 148274098 - CMM_2914 - putative reductase 2921 69.05 0 3239594..3240769 - 391 148274099 - CMM_2915 - putative Zn-dependant dehydrogenase 2922 70.94 0 3241144..3241494 - 116 148274100 - CMM_2916 - hypothetical protein 2923 67.90 -1 3241651..3241974 - 107 148274101 - CMM_2917 - hypothetical protein 2924 67.16 -1 3242226..3242429 + 67 148274102 - CMM_2918 - hypothetical protein 2925 73.44 0 3242535..3243257 + 240 148274103 deoC CMM_2919 - deoxyribose-phosphate aldolase 2926 76.00 0 3243257..3244552 + 431 148274104 - CMM_2920 - putative aminopeptidase 2 2927 76.47 0 3244634..3245347 - 237 148274105 - CMM_2921 - hypothetical protein 2928 74.65 0 3245403..3246053 + 216 148274106 - CMM_2922 - putative dienelactone hydrolase 2929 68.10 -1 3246154..3246573 + 139 148274107 - CMM_2923 - hypothetical protein 2930 77.73 +1 3246688..3247383 + 231 148274108 - CMM_2924 - hypotheical membrane protein 2931 69.20 0 3247415..3248716 - 433 148274109 - CMM_2925 - putative helicase 2932 74.71 0 3248847..3249866 + 339 148274110 - CMM_2926 - hypothetical protein 2933 71.79 0 3249982..3250410 + 142 148274111 - CMM_2927 - hypothetical protein 2934 74.14 0 3250434..3251276 - 280 148274112 fecE CMM_2928 - putative iron-siderophore ABC transporter, ATP-binding protein 2935 77.24 +1 3251311..3252417 - 368 148274113 fecD2 CMM_2929 - putative iron-siderophore ABC transporter,permease component 2936 77.15 +1 3252414..3253472 - 352 148274114 fecC2 CMM_2930 - putative iron-siderophore ABC transporter,permease component 2937 72.04 0 3253575..3254579 + 334 148274115 fecB2 CMM_2931 - putative iron-siderophore ABC transporter,substrate-binding protein 2938 74.96 0 3254708..3255382 + 224 148274116 - CMM_2932 - hypothetical protein 2939 71.41 0 3255416..3257395 - 659 148274117 - CMM_2933 - membrane protein, putative copper export protein 2940 70.14 0 3257527..3257814 - 95 148274118 hupB CMM_2934 - putative DNA-binding protein HU 2941 69.93 0 3257946..3258251 - 101 148274119 rpsN CMM_2935 - 30S ribosomal protein S14 2942 64.29 -2 3258254..3258421 - 55 148274120 rpmG CMM_2936 - 50S ribosomal protein L33 2943 63.71 -2 3258421..3258657 - 78 148274121 rpmB CMM_2937 - 50S ribosomal protein L28 2944 74.89 0 3258872..3259321 - 149 148274122 furB CMM_2938 - ferric uptake regulator family protein 2945 70.77 0 3259318..3260244 - 308 148274123 - CMM_2939 - putative metal ABC transporter, permease component 2946 74.09 0 3260241..3261116 - 291 148274124 - CMM_2940 - putative metal ABC transporter, ATP-binding protein 2947 70.75 0 3261113..3262066 - 317 148274125 - CMM_2941 - putative metal ABC transporter, substrate-binding protein 2948 72.16 0 3262136..3263536 - 466 148274126 - CMM_2942 - branched-chain alpha-keto acid dehydrogenase subunit E2 2949 71.50 0 3263577..3264632 - 351 148274127 - CMM_2943 - putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component 2950 71.34 0 3264629..3265741 - 370 148274128 - CMM_2944 - putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component 2951 74.10 0 3265751..3266866 - 371 148274129 hisC2 CMM_2945 - putative aminotransferase 2952 67.68 -1 3266937..3267332 + 131 148274130 - CMM_2946 - hypothetical protein 2953 77.49 +1 3267341..3268615 - 424 148274131 - CMM_2947 - hypothetical protein 2954 78.59 +1 3268612..3268938 - 108 148274132 - CMM_2948 - hypothetical protein 2955 72.73 0 3269071..3269598 + 175 148274133 - CMM_2949 - putative protein-tyrosine-phosphatase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0