version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2802 72.52 0 3123286..3124224 - 312 148273980 - CMM_2796 - putative oxidoreductase 2803 72.99 0 3124385..3126124 + 579 148273981 aglC CMM_2797 - alpha-glucosidase 2804 75.86 0 3126205..3127389 - 394 148273982 - CMM_2798 - M23 family membrane bound metalloendopeptidase 2805 75.19 0 3127615..3128424 - 269 148273983 suhB CMM_2799 - putative inositol-1-monophosphatase 2806 73.28 0 3128470..3129210 - 246 148273984 - CMM_2800 - hypothetical protein 2807 76.39 0 3129273..3130259 - 328 148273985 - CMM_2801 - putative oxidoreductase 2808 64.21 -2 3130585..3131073 + 162 148273986 - CMM_2802 - hypothetical protein 2809 67.89 -1 3131155..3132624 + 489 148273987 - CMM_2803 - putative phospholipase, cardiolipin synthetase 2810 71.72 0 3132652..3133146 - 164 148273988 - CMM_2804 - MarR family transcriptional regulator 2811 81.43 +2 3133271..3133954 - 227 148273989 - CMM_2805 - hypothetical protein 2812 70.75 0 3134092..3135462 - 456 148273990 - CMM_2806 - putative ferredoxin/ferredoxin-NADP reductase 2813 73.84 0 3135553..3136626 - 357 148273991 menX CMM_2807 - putative polyprenyl diphosphate synthase 2814 71.43 0 3136662..3137396 - 244 148273992 menH CMM_2808 - putative menaquinone biosynthesis methyltransferase 2815 78.53 +1 3137404..3140142 - 912 148273994 - CMM_2809 - putative sugar MFS permease 2816 77.02 +1 3137557..3138831 + 424 148273993 menF CMM_2810 - putative isochorismate synthase 2817 76.92 +1 3140139..3140684 - 181 148273995 - CMM_2811 - hypothetical protein 2818 76.51 0 3140800..3142566 - 588 148273996 menD CMM_2812 - menaquinone biosynthesis bifunctional protein menD 2819 73.52 0 3142573..3142995 - 140 148273997 - CMM_2813 - hypothetical protein 2820 75.07 0 3143135..3143515 + 126 148273998 - CMM_2814 - hypothetical protein 2821 78.84 +1 3143526..3143903 - 125 148273999 - CMM_2815 - hypothetical protein 2822 71.98 0 3143909..3144793 - 294 148274000 menA CMM_2816 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2823 75.17 0 3144952..3145704 - 250 148274001 - CMM_2817 - putative mutase 2824 77.89 +1 3145803..3146711 - 302 148274002 - CMM_2818 - hypothetical protein 2825 71.41 0 3146734..3148716 - 660 148274003 - CMM_2819 - metallopeptidase family M13 2826 69.57 0 3148824..3149030 + 68 148274004 - CMM_2820 - Cro/CI family transcriptional regulator 2827 71.14 0 3149014..3149415 + 133 148274005 - CMM_2821 - hypothetical protein 2828 71.57 0 3149521..3150804 + 427 148274006 - CMM_2822 - xanthine/uracil family permease 2829 75.29 0 3150990..3152369 + 459 148274007 - CMM_2823 - hypothetical protein 2830 77.37 +1 3152348..3154141 - 597 148274008 - CMM_2824 - amidase 2831 74.86 0 3154138..3154869 - 243 148274009 - CMM_2825 - hypothetical protein 2832 74.95 0 3154866..3156242 - 458 148274010 - CMM_2826 - cytosine permease 2833 76.67 0 3156391..3157080 + 229 148274011 - CMM_2827 - GntR family transcriptional regulator 2834 75.25 0 3157101..3157799 - 232 148274012 - CMM_2828 - putative phosphatase 2835 73.49 0 3157838..3158350 - 170 148274013 - CMM_2829 - hypothetical protein 2836 78.48 +1 3158485..3159390 + 301 148274014 mmuM CMM_2830 - homocysteine methyltransferase 2837 76.04 0 3159476..3160339 - 287 148274015 - CMM_2831 - putative nucleoside-diphosphate-sugar epimerase 2838 73.23 0 3160454..3160834 + 126 148274016 - CMM_2832 - putative transcriptional regulator 2839 75.23 0 3160911..3162206 + 431 148274017 - CMM_2833 - putative MFS permease 2840 72.55 0 3162309..3163175 + 288 148274018 - CMM_2834 - putative oxidoreductase 2841 77.78 +1 3163203..3164138 - 311 148274019 - CMM_2835 - LysR family transcriptional regulator 2842 77.71 +1 3164228..3165205 + 325 148274020 - CMM_2836 - permease DMT family 2843 76.41 0 3165202..3165591 + 129 148274021 - CMM_2837 - hypothetical protein 2844 80.67 +2 3165588..3165944 + 118 148274022 - CMM_2838 - hypothetical protein 2845 72.41 0 3165974..3166843 - 289 148274023 - CMM_2839 - putative nucleoside-diphosphate-sugar epimerase 2846 76.66 0 3167078..3167968 - 296 148274024 - CMM_2840 - putative sugar kinase 2847 74.46 0 3167961..3169025 - 354 148274025 - CMM_2841 - LacI family transcriptional regulator 2848 69.94 0 3169139..3170239 + 366 148274026 - CMM_2842 - putative sugar ABC transporter, substrate binding protein 2849 70.68 0 3170242..3171288 + 348 148274027 - CMM_2843 - putative sugar ABC transporter, permease component 2850 70.93 0 3171285..3172082 + 265 148274028 - CMM_2844 - putative sugar ABC transporter, ATP-binding protein 2851 72.11 0 3172079..3172372 + 97 148274029 - CMM_2845 - hypothetical protein 2852 53.44 -2 3172596..3173699 - 367 148274030 - CMM_2846 - putative plasmid maintenance system, antidote protein 2853 58.04 -2 3173728..3174063 - 111 148274031 - CMM_2847 - putative plasmid maintemance system, killer protein 2854 71.98 0 3174495..3175247 - 250 148274032 - CMM_2848 - putative short chain dehydrogenase/oxidoreductase 2855 70.53 0 3175441..3177510 + 689 148274033 - CMM_2849 - putative phosphatase 2856 79.38 +1 3177707..3178060 + 117 148274034 - CMM_2850 - hypothetical protein 2857 76.90 +1 3178108..3178713 + 201 148274035 - CMM_2851 - hypothetical protein 2858 72.22 0 3178770..3179507 + 245 148274036 - CMM_2852 - ZIP family zinc transporter, 2859 77.48 +1 3179562..3180116 - 184 148274037 - CMM_2853 - MarR family transcriptional regulator 2860 75.83 0 3180258..3182069 + 603 148274038 - CMM_2854 - hypothetical protein 2861 76.93 +1 3182066..3183478 + 470 148274039 - CMM_2855 - multidrug exporter MOPMATE family membrane protein 2862 74.56 0 3183494..3184354 - 286 148274040 - CMM_2856 - putative aldo/keto reductase 2863 74.38 0 3184406..3184846 - 146 148274041 - CMM_2857 - hypothetical protein 2864 76.67 0 3184856..3185875 - 339 148274042 - CMM_2858 - S-isoprenylcysteine methyltransferase-like protein 2865 75.19 0 3185872..3186387 - 171 148274043 - CMM_2859 - hypothetical protein 2866 74.12 0 3186445..3186981 + 178 148274044 - CMM_2860 - hypothetical protein 2867 75.76 0 3187048..3187608 + 186 148274045 - CMM_2861 - putative acetyltransferase 2868 77.65 +1 3187605..3188123 - 172 148274046 - CMM_2862 - putative acetyltransferase 2869 75.21 0 3188177..3188785 + 202 148274047 - CMM_2863 - hypothetical protein 2870 74.39 0 3188818..3189879 + 353 148274048 - CMM_2864 - membrane protein, putative DMT transporter 2871 70.98 0 3189889..3190584 + 231 148274049 - CMM_2865 - hypothetical protein 2872 74.44 0 3190640..3191359 + 239 148274050 - CMM_2866 - putative hydrolase 2873 70.78 0 3191473..3191934 + 153 148274051 - CMM_2867 - MarR family transcriptional regulator 2874 76.78 +1 3191994..3192863 + 289 148274052 - CMM_2868 - putative membrane-bound Zn-dependent protease 2875 75.41 0 3193115..3194224 + 369 148274053 - CMM_2869 - hypothetical protein 2876 76.54 0 3194287..3194934 + 215 148274054 - CMM_2870 - hypothetical protein 2877 76.39 0 3194955..3196445 - 496 148274055 pgaA CMM_2871 - hypothetical protein 2878 76.47 0 3196563..3197429 - 288 148274056 - CMM_2872 - putative hydrolase/acyltransferase 2879 70.49 0 3197579..3198913 + 444 148274057 - CMM_2873 - diaminobutyrate--2-oxoglutarate aminotransferase 2880 71.84 0 3198968..3199315 - 115 148274058 - CMM_2874 - hypothetical protein 2881 73.29 0 3199354..3199821 - 155 148274059 - CMM_2875 - hypothetical protein 2882 76.02 0 3199850..3200512 - 220 148274060 - CMM_2876 - putative two-component system, response regulator 2883 77.41 +1 3200509..3202332 - 607 148274061 - CMM_2877 - putative two-component system, sensor kinase 2884 70.87 0 3202468..3203919 + 483 148274062 - CMM_2878 - citrate transporter 2885 73.47 0 3204043..3205512 - 489 148274063 - CMM_2879 - hypothetical protein 2886 74.77 0 3205613..3206044 - 143 148274064 - CMM_2880 - hypothetical protein 2887 78.07 +1 3206148..3207173 + 341 148274065 - CMM_2881 - LysR family transcriptional regulator 2888 73.50 0 3207204..3207935 - 243 148274066 - CMM_2882 - hypothetical protein 2889 73.28 0 3208085..3208432 + 115 148274067 - CMM_2883 - hypothetical protein 2890 70.01 0 3208462..3209358 - 298 148274068 ubiA CMM_2884 - prenyltransferase 2891 64.77 -2 3209351..3209719 - 122 148274069 crtY2 CMM_2885 - putative C50 carotenoid epsilon cyclase 2892 68.41 -1 3209716..3210060 - 114 148274070 crtY1 CMM_2886 - putative C50 carotenoid epsilon cyclase 2893 73.28 0 3210060..3212705 - 881 148274071 crtBI CMM_2887 - putative bifunctional phytoene synthase/phytoene dehydrogenase 2894 72.73 0 3212702..3213724 - 340 148274072 crtE CMM_2888 - putative geranylgeranyl pyrophosphate synthase 2895 73.16 0 3213817..3214401 + 194 148274073 idiA CMM_2889 - isopentenyl-diphosphate delta-isomerase 2896 74.18 0 3214474..3215352 - 292 148274074 - CMM_2890 - putative phospholipase 2897 79.83 +1 3215480..3216064 - 194 148274075 - CMM_2891 - MarR family transcriptional regulator 2898 75.13 0 3216142..3218220 + 692 148274076 - CMM_2892 - RND family transporter 2899 73.17 0 3218297..3219049 + 250 148274077 - CMM_2893 - putative short chain dehydrogenase/oxidoreductase 2900 79.15 +1 3219046..3219654 - 202 148274078 - CMM_2894 - TetR family transcriptional regulator 2901 75.87 0 3219715..3220203 + 162 148274079 - CMM_2895 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0