version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 229 73.70 0 286773..287369 - 198 148271407 - CMM_0228 - TetR family transcriptional regulator 230 74.65 0 287456..289510 - 684 148271408 - CMM_0229 - putative acyl esterase 231 75.49 0 289507..291240 - 577 148271409 - CMM_0230 - putative peptide ABC transporter, ATP-binding protein 232 72.22 0 291237..292118 - 293 148271410 - CMM_0231 - putative peptide ABC transporter, permease component 233 71.27 0 292115..293134 - 339 148271411 - CMM_0232 - putative peptide ABC transporter, permease component 234 70.53 0 293131..294786 - 551 148271412 - CMM_0233 - putative peptide ABC transporter, substrate-binding protein 235 71.40 0 294887..295393 - 168 148271413 - CMM_0234 - hypothetical protein 236 72.00 0 295483..296382 - 299 148271414 - CMM_0235 - hypothetical protein 237 71.49 0 296480..298468 - 662 148271415 - CMM_0236 - hypothetical protein 238 73.17 0 298681..299049 - 122 148271416 - CMM_0237 - hypothetical protein 239 74.02 0 299132..300355 - 407 148271417 - CMM_0238 - putative bicyclomycin efflux MFS permease 240 69.82 0 300554..300775 + 73 148271418 - CMM_0239 - hypothetical protein 241 72.32 0 300958..301788 + 276 148271419 - CMM_0240 - putative short-chain alcohol dehydrogenase 242 70.70 0 301826..302098 - 90 148271420 - CMM_0241 - hypothetical protein 243 76.40 0 302169..302795 - 208 148271421 ogtA CMM_0242 - 6-O-methylguanine-DNA methyltransferase 244 77.21 +1 302792..303322 - 176 148271422 sigY CMM_0243 - hypothetical protein 245 76.29 0 303648..304385 + 245 148271423 - CMM_0244 - putative two-component system response regulator 246 76.36 0 304664..305953 + 429 148271424 - CMM_0245 - hypothetical protein 247 53.90 -2 306397..310155 + 1252 148271425 - CMM_0246 - hypothetical protein 248 73.91 0 310377..311591 + 404 148271426 - CMM_0247 - putative oxidoreductase/dehydrogenase 249 79.92 +1 311642..312358 + 238 148271427 - CMM_0248 - hypothetical protein 250 77.68 +1 312537..313244 + 235 148271428 - CMM_0249 - hypothetical protein 251 75.35 0 313241..314725 + 494 148271429 - CMM_0250 - hypothetical protein 252 74.56 0 314775..315788 - 337 148271430 - CMM_0251 - LacI family transcriptional regulator 253 70.95 0 315851..316573 - 240 148271431 - CMM_0252 - hypothetical protein 254 78.17 +1 316624..317823 - 399 148271432 - CMM_0253 - hypothetical protein 255 73.02 0 317976..318227 - 83 148271433 - CMM_0254 - hypothetical protein 256 72.52 0 318363..319832 + 489 148271434 - CMM_0255 - putative MFS permease 257 76.10 0 320052..320687 - 211 148271435 - CMM_0256 - hypothetical protein 258 73.92 0 320698..321345 - 215 148271436 - CMM_0257 - MerR family transcriptional regulator 259 74.24 0 321541..322134 - 197 148271437 - CMM_0258 - hypothetical protein 260 77.14 +1 322313..322837 + 174 148271438 crcB1 CMM_0259 - putative membrane protein involved in chromosome condensation 261 76.38 0 322834..323214 + 126 148271439 crcB2 CMM_0260 - putative membrane protein involved in chromosome condensation 262 78.20 +1 323211..323687 + 158 148271440 - CMM_0261 - putative acetyltransferase 263 76.19 0 323697..324284 + 195 148271441 - CMM_0262 - putative NTP pyrophosphohydrolases 264 76.49 0 324294..325301 - 335 148271442 ddlA CMM_0263 - putative D-alanine--D-alanine ligase 265 77.22 +1 325348..326058 - 236 148271443 - CMM_0264 - hypothetical protein 266 70.99 0 326061..326615 - 184 148271444 - CMM_0265 - hypothetical protein 267 71.21 0 326881..328224 + 447 148271445 - CMM_0266 - hypothetical protein 268 74.71 0 328221..329078 + 285 148271446 - CMM_0267 - RpiR family transcriptional regulator 269 77.25 +1 329139..330083 + 314 148271447 - CMM_0268 - putative hydroxyacid dehydrogenase 270 75.27 0 330080..331660 + 526 148271448 - CMM_0269 - putative aldehyde dehydrogenase 271 70.22 0 331874..333112 + 412 148271449 - CMM_0270 - putative sugar ABC transporter, substrate binding protein 272 68.79 -1 333112..334101 + 329 148271450 - CMM_0271 - putative sugar ABC transporter, permease component 273 69.63 0 334094..334969 + 291 148271451 - CMM_0272 - putative sugar ABC transporter, permease component 274 70.17 0 335052..335822 + 256 148271452 - CMM_0273 - trehalose utilization-related protein 275 75.85 0 335819..337048 + 409 148271453 - CMM_0274 - putative dehydrogenase 276 77.40 +1 337069..338382 + 437 148271454 - CMM_0275 - ROK family transcriptional regulator 277 74.12 0 338379..339035 + 218 148271455 - CMM_0276 - hypothetical protein 278 76.95 +1 339073..340074 - 333 148271456 - CMM_0277 - hypothetical protein 279 76.65 0 340257..340847 + 196 148271457 - CMM_0278 - putative chorismate mutase 280 75.22 0 340959..341297 - 112 148271458 - CMM_0279 - hypothetical protein 281 73.78 0 341356..341847 - 163 148271459 - CMM_0280 - hypothetical protein 282 75.72 0 342105..342899 - 264 148271460 - CMM_0281 - putative acetyltransferase 283 77.69 +1 342905..345463 - 852 148271461 - CMM_0282 - hypothetical protein 284 74.45 0 345561..346151 + 196 148271462 - CMM_0283 - putative adenylate kinase 285 76.87 +1 346118..346705 - 195 148271463 - CMM_0284 - hypothetical protein 286 76.96 +1 346723..347499 - 258 148271464 - CMM_0285 - permease DMT family 287 74.64 0 347748..348374 + 208 148271465 - CMM_0286 - TetR family transcriptional regulator 288 74.90 0 348371..348868 + 165 148271466 - CMM_0287 - diadenosine tetraphosphate hydrolase 289 73.39 0 348940..349608 + 222 148271467 - CMM_0288 - putative oxidoreductase 290 71.28 0 349694..350386 - 230 148271468 - CMM_0289 - hypothetical protein 291 73.77 0 350578..351084 + 168 148271469 sigL CMM_0290 - RNA polymerase ECF-subfamily sigma factor 292 76.39 0 351081..351872 + 263 148271470 - CMM_0291 - hypothetical protein 293 72.42 0 352171..352761 - 196 148271471 - CMM_0292 - hypothetical protein 294 70.25 0 352835..354202 + 455 148271472 - CMM_0293 - putative MFS permease 295 76.39 0 354199..354702 - 167 148271473 - CMM_0294 - hypothetical protein 296 74.18 0 354731..355741 - 336 148271474 - CMM_0295 - LacI family transcriptional regulator 297 69.45 0 355969..357261 + 430 148271475 - CMM_0296 - putative sugar ABC transporter, substrate-binding protein 298 67.54 -1 357272..358297 + 341 148271476 - CMM_0297 - putative sugar ABC transporter, permease component 299 67.33 -1 358294..359199 + 301 148271477 - CMM_0298 - putative sugar ABC transporter, permease component 300 75.31 0 359196..361577 + 793 148271478 bglX CMM_0299 - putative beta-glycosidase 301 78.21 +1 361717..362565 - 282 148271479 - CMM_0300 - putative nucleoside-diphosphate-sugar epimerase 302 79.07 +1 362661..363410 + 249 148271480 - CMM_0301 - TetR family transcriptional regulator 303 75.29 0 363450..364307 - 285 148271481 - CMM_0302 - Cro/CI family transcriptional regulator 304 72.25 0 364409..365089 + 226 148271482 - CMM_0303 - short chain oxidoreductase 305 75.94 0 365157..365555 + 132 148271483 - CMM_0304 - hypothetical protein 306 75.49 0 365594..366160 + 188 148271484 - CMM_0305 - hypothetical protein 307 74.83 0 366519..367412 + 297 148271485 - CMM_0306 - hypothetical protein 308 75.85 0 367435..367848 - 137 148271486 - CMM_0307 - putative sulfurtransferase 309 73.27 0 368106..369347 + 413 148271487 - CMM_0308 - hypothetical protein 310 75.47 0 369387..369920 - 177 148271488 - CMM_0309 - hypothetical protein 311 69.65 0 370093..371634 + 513 148271489 abfA1 CMM_0310 - hypothetical protein 312 73.52 0 371722..371940 - 72 148271490 - CMM_0311 - hypothetical protein 313 74.28 0 372277..372867 - 196 148271491 - CMM_0312 - putative acetyltransferase 314 76.61 0 372914..373255 - 113 148271492 - CMM_0313 - hypothetical protein 315 77.65 +1 373355..374428 + 357 148271493 - CMM_0314 - hypothetical protein 316 77.45 +1 374511..375521 + 336 148271494 - CMM_0315 - putative thioredoxin reductase 317 71.73 0 375588..377780 + 730 148271495 clpY CMM_0316 - ATPase with chaperone activity, ATP-binding subunit 318 74.31 0 377847..380030 - 727 148271496 agaA CMM_0317 - hypothetical protein 319 72.92 0 380141..380620 + 159 148271497 - CMM_0318 - putative transcriptional regulator 320 74.17 0 380682..381347 - 221 148271498 - CMM_0319 - hypothetical protein 321 76.64 0 381414..381764 - 116 148271499 - CMM_0320 - hypothetical protein 322 71.64 0 381880..382884 + 334 148271500 - CMM_0321 - putative oxidoreductase 323 77.25 +1 382892..384100 + 402 148271501 - CMM_0322 - putative dipeptidase 324 79.98 +1 384097..384960 + 287 148271502 - CMM_0323 - GNAT family acetyltransferase 325 77.85 +1 384894..386636 - 580 148271503 - CMM_0324 - putative ABC transporter (fused permease/ATPase) 326 77.98 +1 386636..388456 - 606 148271504 - CMM_0325 - putative ABC transporter (fused permease/ATPase) 327 77.17 +1 388453..389223 - 256 148271505 - CMM_0326 - hypothetical protein 328 78.72 +1 389220..390032 - 270 148271506 - CMM_0327 - putative thioesterase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.