version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2587 77.51 +1 2917061..2918065 - 334 148273765 truA CMM_2581 - putative tRNA pseudouridine synthase 2588 74.04 0 2918062..2919132 - 356 148273766 - CMM_2582 - putative acetyltransferase 2589 72.16 0 2919257..2919820 - 187 148273767 rplQ CMM_2583 - 50S ribosomal protein L17 2590 67.47 -1 2919873..2920868 - 331 148273768 rpoA CMM_2584 - DNA-directed RNA polymerase subunit alpha 2591 70.18 0 2921030..2921428 - 132 148273769 rpsK CMM_2585 - 30S ribosomal protein S11 2592 67.47 -1 2921473..2921847 - 124 148273770 rpsM CMM_2586 - 30S ribosomal protein S13 2593 62.28 -2 2922001..2922114 - 37 148273771 rpmJ CMM_2587 - 50S ribosomal protein L36 2594 61.71 -2 2922187..2922408 - 73 148273772 infA CMM_2588 - translation initiation factor IF-1 2595 74.36 0 2922650..2923819 - 389 148273773 mtlD CMM_2589 - mannitol-1-phosphate 5-dehydrogenase 2596 68.26 -1 2923816..2924253 - 145 148273774 mtlF CMM_2590 - putative PTS system mannitol-specific IIA component 2597 69.41 0 2924361..2925890 - 509 148273775 mtlA CMM_2591 - putative PTS system mannitol-specific IIBC component 2598 75.52 0 2926003..2927673 - 556 148273776 - CMM_2592 - phosphoenolpyruvate-protein phosphotransferase,PTS enzyme I 2599 71.16 0 2927670..2927936 - 88 148273777 - CMM_2593 - hypothetical protein 2600 79.00 +1 2928035..2928415 - 126 148273778 - CMM_2594 - putative PTS system cellobiose-specific IIB component 2601 72.10 0 2928627..2930615 + 662 148273779 - CMM_2595 - transcription antiterminator 2602 73.24 0 2930668..2931504 - 278 148273780 mapA2 CMM_2596 - putative methionine aminopeptidase 2603 73.47 0 2931509..2932111 - 200 148273781 adk CMM_2597 - adenylate kinase 2604 65.99 -1 2932108..2933430 - 440 148273782 secY CMM_2598 - preprotein translocase subunit SecY 2605 69.08 0 2933556..2934134 - 192 148273783 rplO CMM_2599 - 50S ribosomal protein L15 2606 63.39 -2 2934134..2934316 - 60 148273784 rpmD CMM_2600 - 50S ribosomal protein L30 2607 71.47 0 2934316..2934981 - 221 148273785 rpsE CMM_2601 - 30S ribosomal protein S5 2608 68.82 -1 2935017..2935388 - 123 148273786 rplR CMM_2602 - 50S ribosomal protein L18 2609 67.04 -1 2935391..2935927 - 178 148273787 rplF CMM_2603 - 50S ribosomal protein L6 2610 67.67 -1 2935932..2936330 - 132 148273788 rpsH CMM_2604 - 30S ribosomal protein S8 2611 67.00 -1 2936468..2937064 - 198 148273789 rplE CMM_2605 - 50S ribosomal protein L5 2612 66.11 -1 2937067..2937426 - 119 148273790 rplX CMM_2606 - 50S ribosomal protein L24 2613 63.69 -2 2937429..2937797 - 122 148273791 rplN CMM_2607 - 50S ribosomal protein L14 2614 65.66 -1 2937825..2938121 - 98 148273792 rpsQ CMM_2608 - 30S ribosomal protein S17 2615 66.67 -1 2938124..2938450 - 108 148273793 rpmC CMM_2609 - 50S ribosomal protein L29 2616 66.90 -1 2938450..2938869 - 139 148273794 rplP CMM_2610 - 50S ribosomal protein L16 2617 69.05 0 2938872..2939669 - 265 148273795 rpsC CMM_2611 - 30S ribosomal protein S3 2618 66.67 -1 2939669..2940061 - 130 148273796 rplV CMM_2612 - 50S ribosomal protein L22 2619 63.83 -2 2940087..2940368 - 93 148273797 rpsS CMM_2613 - 30S ribosomal protein S19 2620 68.81 -1 2940381..2941220 - 279 148273798 rplB CMM_2614 - 50S ribosomal protein L2 2621 61.33 -2 2941243..2941542 - 99 148273799 rplW CMM_2615 - 50S ribosomal protein L23 2622 69.25 0 2941539..2942195 - 218 148273800 rplD CMM_2616 - 50S ribosomal protein L4 2623 67.74 -1 2942198..2942851 - 217 148273801 rplC CMM_2617 - 50S ribosomal protein L3 2624 63.43 -2 2942860..2943168 - 102 148273802 rpsJ CMM_2618 - 30S ribosomal protein S10 2625 71.41 0 2943609..2944577 - 322 148273803 - CMM_2619 - putative topoisomerase IB 2626 66.58 -1 2944727..2945920 - 397 148273804 tufA CMM_2620 - elongation factor Tu 2627 65.39 -1 2946034..2948148 - 704 148273805 fusA CMM_2621 - elongation factor G 2628 67.30 -1 2948196..2948666 - 156 148273806 rpsG CMM_2622 - 30S ribosomal protein S7 2629 68.27 -1 2948666..2949040 - 124 148273807 rpsL CMM_2623 - 30S ribosomal protein S12 2630 73.94 0 2949306..2949731 - 141 148273808 - CMM_2624 - hypothetical protein 2631 74.82 0 2949751..2950743 - 330 148273809 - CMM_2625 - hypothetical protein 2632 72.86 0 2950817..2951656 - 279 148273810 - CMM_2626 - putative polar amino acid ABC transporter, ATP-binding protein 2633 68.17 -1 2951643..2952308 - 221 148273811 - CMM_2627 - putative polar amino acid ABC transporter,permease component 2634 70.55 0 2952353..2953201 - 282 148273812 - CMM_2628 - putative polar amino acid ABC transporter,substrate-binding protein 2635 74.69 0 2953410..2953895 - 161 148273813 - CMM_2629 - hypothetical protein 2636 68.18 -1 2954078..2957977 - 1299 148273814 rpoC CMM_2630 - DNA-directed RNA polymerase subunit beta' 2637 67.30 -1 2958026..2961514 - 1162 148273815 rpoB CMM_2631 - DNA-directed RNA polymerase subunit beta 2638 76.08 0 2961820..2962488 + 222 148273816 - CMM_2632 - putative Zn-dependant hydrolase 2639 73.66 0 2962541..2963398 + 285 148273817 - CMM_2633 - hypothetical protein 2640 74.85 0 2963439..2964623 + 394 148273818 - CMM_2634 - hypothetical protein 2641 73.58 0 2964688..2965164 + 158 148273819 - CMM_2635 - hypothetical protein 2642 75.05 0 2965201..2965713 + 170 148273820 - CMM_2636 - hypothetical protein 2643 78.32 +1 2965710..2966387 + 225 148273821 - CMM_2637 - hypothetical protein 2644 64.69 -2 2966416..2966718 - 100 148273822 - CMM_2638 - hypothetical protein 2645 80.54 +1 2966832..2967422 - 196 148273823 - CMM_2639 - hypothetical protein 2646 74.85 0 2967406..2967906 - 166 148273824 - CMM_2640 - hypothetical protein 2647 74.49 0 2967976..2968512 + 178 148273825 - CMM_2641 - hypothetical protein 2648 75.76 0 2968514..2969041 - 175 148273826 - CMM_2642 - hypothetical protein 2649 74.07 0 2969091..2969738 + 215 148273827 - CMM_2643 - hypothetical protein 2650 73.43 0 2969846..2971516 + 556 148273828 - CMM_2644 - putative ATP-dependent helicase 2651 75.16 0 2971696..2972319 + 207 148273829 - CMM_2645 - TetR family transcriptional regulator 2652 72.61 0 2972390..2972944 - 184 148273830 - CMM_2646 - hypothetical protein 2653 75.70 0 2973111..2973752 + 213 148273831 - CMM_2647 - putative phospholipase/carboxylesterase 2654 75.03 0 2973833..2978653 + 1606 148273832 - CMM_2648 - putative ATP-dependent helicase 2655 73.51 0 2978681..2979484 + 267 148273833 - CMM_2649 - putative endonuclease VIII/DNA glycosylase 2656 70.12 0 2979603..2981135 - 510 148273834 - CMM_2650 - cationic amino acid permease APC family 2657 76.88 +1 2981390..2982397 + 335 148273835 sigF CMM_2651 - putative RNA polymerase sigma factor, SigF-homolog (stress response/stationary phase sigma factor) 2658 78.61 +1 2982466..2983068 - 200 148273836 - CMM_2652 - putative two-component system, sensor kinase/response regulator hybrid protein 2659 76.26 0 2983279..2984091 - 270 148273837 - CMM_2653 - hypothetical protein 2660 74.75 0 2984215..2984622 + 135 148273838 - CMM_2654 - hypothetical protein 2661 68.85 0 2984687..2984869 + 60 148273839 - CMM_2655 - putative transcriptional regulator 2662 76.00 0 2984985..2986892 + 635 148273840 - CMM_2656 - putative amidase 2663 74.64 0 2986913..2988430 - 505 148273841 - CMM_2657 - putative phosphatase 2664 74.48 0 2988519..2989901 - 460 148273842 - CMM_2658 - putative penicillin-binding protein 2665 75.05 0 2989898..2990410 - 170 148273843 - CMM_2659 - MarR family transcriptional regulator 2666 77.25 +1 2990469..2991677 + 402 148273844 - CMM_2660 - putative monooxygenase 2667 74.51 0 2991847..2992254 + 135 148273845 - CMM_2661 - hypothetical protein 2668 74.75 0 2992321..2992926 - 201 148273846 - CMM_2662 - putative nitroreductase 2669 74.67 0 2993046..2994182 - 378 148273847 - CMM_2663 - putative oxidoreductase 2670 71.31 0 2994179..2994910 - 243 148273848 - CMM_2664 - hypothetical protein 2671 74.97 0 2995087..2995941 + 284 148273849 - CMM_2665 - hypothetical protein 2672 71.88 0 2995954..2997852 - 632 148273850 - CMM_2666 - putative multidrug ABC transporter, fused permease and ATP-binding protein 2673 76.00 0 2998206..2999030 + 274 148273851 - CMM_2667 - hypothetical protein 2674 64.16 -2 2999145..2999423 - 92 148273852 - CMM_2668 - hypothetical protein 2675 68.91 0 2999548..3000216 + 222 148273853 - CMM_2669 - putative two-component system response regulator 2676 68.20 -1 3000417..3001199 - 260 148273854 - CMM_2670 - putative cell filamentation protein 2677 68.60 -1 3001199..3001405 - 68 148273855 - CMM_2671 - hypothetical protein 2678 73.01 0 3001534..3002652 + 372 148273856 - CMM_2672 - antibiotic immunity protein peptidase family S66 protein 2679 74.21 0 3003259..3004305 + 348 148273857 - CMM_2673 - hypothetical protein 2680 76.12 0 3004315..3005382 - 355 148273858 - CMM_2674 - putative glycosyl transferase 2681 72.07 0 3005450..3006115 - 221 148273859 - CMM_2675 - hypothetical protein 2682 77.30 +1 3006326..3007294 + 322 148273860 blaC CMM_2676 - putative beta-lactamase 2683 78.37 +1 3007331..3007954 - 207 148273861 - CMM_2677 - TetR family transcriptional regulator 2684 79.03 +1 3008020..3008658 + 212 148273862 - CMM_2678 - putative acetyltransferase 2685 72.57 0 3008701..3008937 - 78 148273863 - CMM_2679 - hypothetical protein 2686 75.16 0 3008983..3009453 + 156 148273864 - CMM_2680 - MarR family transcriptional regulator 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0