version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2521 67.89 -1 2830903..2831148 + 81 148273699 - CMM_2515 - hypothetical protein 2522 74.27 0 2831145..2832065 - 306 148273700 - CMM_2516 - putative aldose-1-epimerase 2523 76.69 0 2832076..2832903 - 275 148273701 - CMM_2517 - DeoR family transcriptional regulator 2524 72.79 0 2832997..2834139 + 380 148273702 galT CMM_2518 - hypothetical protein 2525 73.64 0 2834136..2835296 + 386 148273703 galK CMM_2519 - hypothetical protein 2526 75.08 0 2835369..2835974 + 201 148273704 - CMM_2520 - putative acetyltransferase/ siderophore binding protein 2527 74.09 0 2836038..2836940 - 300 148273705 folD CMM_2521 - putative bifunctional methylenetetrahydrofolate dehydrogenase/ cyclohydrolase 2528 71.52 0 2836937..2838214 - 425 148273706 glyA CMM_2522 - serine hydroxymethyltransferase 2529 77.78 +1 2838511..2840157 + 548 148273707 - CMM_2523 - putative glycosidase 2530 77.45 +1 2840198..2840698 + 166 148273708 - CMM_2524 - hypothetical protein 2531 73.78 0 2840729..2841586 - 285 148273709 - CMM_2525 - hypothetical protein 2532 72.94 0 2841743..2843209 + 488 148273710 - CMM_2526 - putative MFS permease 2533 72.38 0 2843118..2844149 - 343 148273711 - CMM_2527 - putative oxidoreductase 2534 74.81 0 2844268..2844942 + 224 148273712 sirR CMM_2528 - hypothetical protein 2535 74.18 0 2844964..2846214 - 416 148273713 mntH CMM_2529 - manganese transporter 2536 73.94 0 2846343..2847263 - 306 148273714 - CMM_2530 - hypothetical protein 2537 75.33 0 2847322..2848626 - 434 148273715 - CMM_2531 - putative sugar MFS-permease 2538 70.56 0 2848705..2849577 + 290 148273716 purU CMM_2532 - putative formyltetrahydrofolate deformylase 2539 68.65 -1 2849608..2850462 - 284 148273717 - CMM_2533 - putative ABC-transporter, permease component 2540 75.31 0 2850459..2851523 - 354 148273718 - CMM_2534 - hypothetical protein 2541 72.91 0 2851656..2855336 - 1226 148273719 sbtB CMM_2535 - serine protease 2542 73.97 0 2855583..2859182 - 1199 148273720 sbtC CMM_2536 - subtilisin-like serine protease,peptidase family S8 2543 66.50 -1 2859432..2860646 - 404 148273721 icdA CMM_2537 - isocitrate dehydrogenase 2544 69.59 0 2860890..2861333 + 147 148273722 - CMM_2538 - hypothetical protein 2545 76.32 0 2861337..2861657 + 106 148273723 - CMM_2539 - putative methylated DNA-protein cysteine methyltransferase 2546 76.73 +1 2861712..2862218 + 168 148273724 - CMM_2540 - hypothetical protein 2547 69.32 0 2862295..2864103 - 602 148273725 - CMM_2541 - putative ABC transporter, fused permease and ATP-binding protein 2548 71.39 0 2864100..2865962 - 620 148273726 - CMM_2542 - putative ABC transporter, fused permease and ATP-binding protein 2549 73.36 0 2866540..2867391 - 283 148273727 ddaH CMM_2543 - putative dimethylarginine dimethylaminohydrolase 2550 72.08 0 2873905..2875530 - 541 148273728 purH CMM_2544 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2551 73.17 0 2875527..2876126 - 199 148273729 purN CMM_2545 - phosphoribosylglycinamide formyltransferase 2552 75.80 0 2876130..2877410 - 426 148273730 - CMM_2546 - hypothetical protein 2553 69.82 0 2877571..2878458 - 295 148273731 sucD CMM_2547 - succinyl-CoA synthetase subunit alpha 2554 71.13 0 2878486..2879649 - 387 148273732 sucC CMM_2548 - succinyl-CoA synthetase subunit beta 2555 75.55 0 2879897..2880718 + 273 148273733 - CMM_2549 - hypothetical protein 2556 76.01 0 2880821..2882821 + 666 148273734 - CMM_2550 - hypothetical protein 2557 68.79 -1 2882793..2885243 - 816 148273735 uvrD1 CMM_2551 - ATP-dependent DNA helicase 2558 75.17 0 2885343..2886401 - 352 148273736 glpQ1 CMM_2552 - hypothetical protein 2559 68.78 -1 2886534..2887337 + 267 148273737 - CMM_2553 - hypothetical protein 2560 72.17 0 2887446..2889026 - 526 148273738 guaA CMM_2554 - bifunctional GMP synthase/glutamine amidotransferase protein 2561 67.40 -1 2889023..2889565 - 180 148273739 - CMM_2555 - hypothetical protein 2562 75.30 0 2889575..2890582 - 335 148273740 - CMM_2556 - hypothetical protein 2563 70.41 0 2890582..2892102 - 506 148273741 napA CMM_2557 - CPA2 family Na+/H+ antiporter 2564 71.35 0 2892106..2892639 - 177 148273742 - CMM_2558 - hypothetical protein 2565 72.74 0 2892741..2893859 - 372 148273743 guaB1 CMM_2559 - inositol-5-monophosphate dehydrogenase 2566 80.65 +1 2893852..2894952 - 366 148273744 - CMM_2560 - hypothetical protein 2567 70.73 0 2895118..2896620 - 500 148273745 guaB2 CMM_2561 - inosine-5'-monophosphate dehydrogenase 2568 70.36 0 2896858..2898318 + 486 148273746 livH CMM_2562 - branched-chain amino acid ABC transporter,permease protein 2569 67.08 -1 2898325..2899296 + 323 148273747 livM CMM_2563 - putative branched-chain amino acid ABC transporter, permease component 2570 67.86 -1 2899289..2900212 + 307 148273748 livG CMM_2564 - putatice branched-chain amino acid ABC transporter, ATPase component 2571 67.85 -1 2900209..2900967 + 252 148273749 livF CMM_2565 - putative branched-chain amino acid ABC transporter, ATPase component 2572 67.60 -1 2901299..2902582 - 427 148273750 livK CMM_2566 - putative branched-chain amino acid ABC transporter, substrate-binding protein 2573 73.17 0 2902761..2903714 - 317 148273751 - CMM_2567 - permease DMT family 2574 67.34 -1 2903875..2904171 - 98 148273752 groES CMM_2568 - co-chaperonin GroES 2575 75.56 0 2904316..2905518 + 400 148273753 - CMM_2569 - putative SAM-dependant methyltransferase 2576 69.01 0 2905604..2906029 - 141 148273754 - CMM_2570 - hypothetical protein 2577 75.74 0 2906134..2907753 - 539 148273755 - CMM_2571 - putative acetyltransferase/glycoprotease fusion protein 2578 76.70 0 2907750..2908367 - 205 148273756 - CMM_2572 - hypothetical protein 2579 77.25 +1 2908377..2910077 - 566 148273757 alrA2 CMM_2573 - putative alanine racemase 2580 76.51 0 2910074..2911231 - 385 148273758 alrA1 CMM_2574 - putative alanine racemase 2581 75.00 0 2911228..2911587 - 119 148273759 acpS CMM_2575 - 4'-phosphopantetheinyl transferase 2582 70.93 0 2911598..2913448 - 616 148273760 glmS CMM_2576 - D-fructose-6-phosphate amidotransferase 2583 70.94 0 2913597..2914556 + 319 148273761 coaA CMM_2577 - pantothenate kinase 2584 72.53 0 2914590..2915903 - 437 148273762 - CMM_2578 - putative phospho-sugar mutase 2585 69.34 0 2915927..2916412 - 161 148273763 rpsI CMM_2579 - 30S ribosomal protein S9 2586 67.79 -1 2916463..2916909 - 148 148273764 rplM CMM_2580 - 50S ribosomal protein L13 2587 77.51 +1 2917061..2918065 - 334 148273765 truA CMM_2581 - putative tRNA pseudouridine synthase 2588 74.04 0 2918062..2919132 - 356 148273766 - CMM_2582 - putative acetyltransferase 2589 72.16 0 2919257..2919820 - 187 148273767 rplQ CMM_2583 - 50S ribosomal protein L17 2590 67.47 -1 2919873..2920868 - 331 148273768 rpoA CMM_2584 - DNA-directed RNA polymerase subunit alpha 2591 70.18 0 2921030..2921428 - 132 148273769 rpsK CMM_2585 - 30S ribosomal protein S11 2592 67.47 -1 2921473..2921847 - 124 148273770 rpsM CMM_2586 - 30S ribosomal protein S13 2593 62.28 -2 2922001..2922114 - 37 148273771 rpmJ CMM_2587 - 50S ribosomal protein L36 2594 61.71 -2 2922187..2922408 - 73 148273772 infA CMM_2588 - translation initiation factor IF-1 2595 74.36 0 2922650..2923819 - 389 148273773 mtlD CMM_2589 - mannitol-1-phosphate 5-dehydrogenase 2596 68.26 -1 2923816..2924253 - 145 148273774 mtlF CMM_2590 - putative PTS system mannitol-specific IIA component 2597 69.41 0 2924361..2925890 - 509 148273775 mtlA CMM_2591 - putative PTS system mannitol-specific IIBC component 2598 75.52 0 2926003..2927673 - 556 148273776 - CMM_2592 - phosphoenolpyruvate-protein phosphotransferase,PTS enzyme I 2599 71.16 0 2927670..2927936 - 88 148273777 - CMM_2593 - hypothetical protein 2600 79.00 +1 2928035..2928415 - 126 148273778 - CMM_2594 - putative PTS system cellobiose-specific IIB component 2601 72.10 0 2928627..2930615 + 662 148273779 - CMM_2595 - transcription antiterminator 2602 73.24 0 2930668..2931504 - 278 148273780 mapA2 CMM_2596 - putative methionine aminopeptidase 2603 73.47 0 2931509..2932111 - 200 148273781 adk CMM_2597 - adenylate kinase 2604 65.99 -1 2932108..2933430 - 440 148273782 secY CMM_2598 - preprotein translocase subunit SecY 2605 69.08 0 2933556..2934134 - 192 148273783 rplO CMM_2599 - 50S ribosomal protein L15 2606 63.39 -2 2934134..2934316 - 60 148273784 rpmD CMM_2600 - 50S ribosomal protein L30 2607 71.47 0 2934316..2934981 - 221 148273785 rpsE CMM_2601 - 30S ribosomal protein S5 2608 68.82 -1 2935017..2935388 - 123 148273786 rplR CMM_2602 - 50S ribosomal protein L18 2609 67.04 -1 2935391..2935927 - 178 148273787 rplF CMM_2603 - 50S ribosomal protein L6 2610 67.67 -1 2935932..2936330 - 132 148273788 rpsH CMM_2604 - 30S ribosomal protein S8 2611 67.00 -1 2936468..2937064 - 198 148273789 rplE CMM_2605 - 50S ribosomal protein L5 2612 66.11 -1 2937067..2937426 - 119 148273790 rplX CMM_2606 - 50S ribosomal protein L24 2613 63.69 -2 2937429..2937797 - 122 148273791 rplN CMM_2607 - 50S ribosomal protein L14 2614 65.66 -1 2937825..2938121 - 98 148273792 rpsQ CMM_2608 - 30S ribosomal protein S17 2615 66.67 -1 2938124..2938450 - 108 148273793 rpmC CMM_2609 - 50S ribosomal protein L29 2616 66.90 -1 2938450..2938869 - 139 148273794 rplP CMM_2610 - 50S ribosomal protein L16 2617 69.05 0 2938872..2939669 - 265 148273795 rpsC CMM_2611 - 30S ribosomal protein S3 2618 66.67 -1 2939669..2940061 - 130 148273796 rplV CMM_2612 - 50S ribosomal protein L22 2619 63.83 -2 2940087..2940368 - 93 148273797 rpsS CMM_2613 - 30S ribosomal protein S19 2620 68.81 -1 2940381..2941220 - 279 148273798 rplB CMM_2614 - 50S ribosomal protein L2 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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