version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2230 74.29 0 2517310..2517939 + 209 148273408 - CMM_2224 - hypothetical protein 2231 73.70 0 2518006..2519385 + 459 148273409 - CMM_2225 - hypothetical protein 2232 67.84 -1 2519491..2520516 + 341 148273410 fbaA CMM_2226 - fructose-bisphosphate aldolase 2233 75.63 0 2520612..2521448 - 278 148273411 - CMM_2227 - hypothetical protein 2234 70.71 0 2521445..2522434 - 329 148273412 ispH CMM_2228 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2235 74.03 0 2522582..2523898 + 438 148273413 xseA CMM_2229 - exodeoxyribonuclease VII large subunit 2236 75.72 0 2523909..2524151 + 80 148273414 xseB CMM_2230 - exodeoxyribonuclease VII small subunit 2237 72.32 0 2524154..2524861 + 235 148273415 - CMM_2231 - hypothetical protein 2238 73.15 0 2524858..2525520 + 220 148273416 cynT CMM_2232 - putative carbonic anhydrase 2239 71.44 0 2525602..2527026 + 474 148273417 fumC CMM_2233 - fumarate hydratase 2240 74.81 0 2527058..2527327 + 89 148273418 - CMM_2234 - hypothetical protein 2241 71.39 0 2527411..2528766 - 451 148273419 - CMM_2235 - putative ATPase 2242 70.74 0 2528994..2529779 - 261 148273420 uppS2 CMM_2236 - putative undecaprenyl diphosphate synthase 2243 70.77 0 2529861..2530616 + 251 148273421 - CMM_2237 - HlyIII family membrane protein 2244 70.87 0 2530641..2532020 - 459 148273422 - CMM_2238 - putative sugar ABC transporter, substrate-binding protein 2245 69.95 0 2532082..2532996 - 304 148273423 - CMM_2239 - putative glycerol ABC transporter, permease component 2246 70.30 0 2532993..2533982 - 329 148273424 - CMM_2240 - putative glycerol ABC transporter, permease component 2247 75.94 0 2534162..2534506 - 114 148273425 - CMM_2241 - hypothetical protein 2248 72.68 0 2534506..2535387 - 293 148273426 - CMM_2242 - hypothetical protein 2249 74.33 0 2535454..2535936 + 160 148273427 - CMM_2243 - hypothetical protein 2250 69.94 0 2535997..2536485 + 162 148273428 greA CMM_2244 - transcription elongation factor GreA 2251 73.84 0 2536552..2537820 - 422 148273429 ilvA CMM_2245 - threonine dehydratase 2252 71.93 0 2537925..2539160 - 411 148273430 - CMM_2246 - AI-E2 family membrane protein 2253 76.34 0 2539261..2540511 + 416 148273431 - CMM_2247 - hypothetical protein 2254 66.67 -1 2540522..2541088 - 188 148273432 - CMM_2248 - hypothetical protein 2255 77.18 +1 2541091..2542593 - 500 148273433 bglL CMM_2249 - putative beta-glucosidase 2256 78.69 +1 2542734..2545028 + 764 148273434 - CMM_2250 - hypothetical protein 2257 69.16 0 2545161..2546603 + 480 148273435 - CMM_2251 - amino acid permease APC family 2258 69.75 0 2546679..2547620 - 313 148273436 - CMM_2252 - hypothetical protein 2259 71.04 0 2547805..2550366 - 853 148273437 - CMM_2253 - hypothetical protein 2260 71.72 0 2550438..2550872 - 144 148273438 - CMM_2254 - putative anti-sigma regulatory factor (Ser/Thr protein kinase) 2261 69.62 0 2550877..2551215 - 112 148273439 - CMM_2255 - putative anti-sigma factor antagonist 2262 69.88 0 2551212..2553203 - 663 148273440 - CMM_2256 - putative glycosyl transferase 2263 73.52 0 2553200..2554396 - 398 148273441 - CMM_2257 - putative protein kinase/phosphatase regulator hybrid protein 2264 75.15 0 2554575..2555729 + 384 148273442 - CMM_2258 - putative membrane-bound acyltransferase 2265 71.03 0 2555945..2557432 - 495 148273443 - CMM_2259 - putative NADH dehydrogenase 2266 77.57 +1 2557470..2558753 - 427 148273444 - CMM_2260 - serine peptidase 2267 76.16 0 2558750..2559265 - 171 148273445 - CMM_2261 - hypothetical protein 2268 73.30 0 2559262..2559834 - 190 148273446 - CMM_2262 - hypothetical protein 2269 70.49 0 2559922..2561202 - 426 148273447 eno CMM_2263 - phosphopyruvate hydratase 2270 74.46 0 2561319..2562626 - 435 148273448 hisS CMM_2264 - histidyl-tRNA synthetase 2271 73.99 0 2562639..2563280 - 213 148273449 - CMM_2265 - TetR family transcriptional regulator 2272 75.82 0 2563435..2564199 - 254 148273450 - CMM_2266 - nucleoside triphosphate pyrophosphohydrolase 2273 75.77 0 2564307..2565536 + 409 148273451 nhaA2 CMM_2267 - NhaA family Na+/H+ antiporter 2274 71.68 0 2565560..2569192 - 1210 148273452 mfdA CMM_2268 - putative transcription-repair coupling factor 2275 71.94 0 2569281..2569868 - 195 148273453 pthA CMM_2269 - peptidyl-tRNA hydrolase 2276 68.84 -1 2570009..2570653 - 214 148273454 rplY CMM_2270 - 50S ribosomal protein L25 2277 75.32 0 2570824..2572833 - 669 148273455 - CMM_2271 - putative gluconokinase/dehydrogenase 2278 70.31 0 2572917..2574371 + 484 148273456 gndA2 CMM_2272 - 6-phosphogluconate dehydrogenase 2279 71.47 0 2574441..2574815 + 124 148273457 - CMM_2273 - hypothetical protein 2280 69.12 0 2574861..2575838 - 325 148273458 prsA CMM_2274 - ribose-phosphate pyrophosphokinase 2281 73.01 0 2575853..2577397 - 514 148273459 glmU CMM_2275 - putative UDP-N-acetylglucosamine pyrophosphorylase 2282 73.41 0 2577650..2578153 + 167 148273460 - CMM_2276 - MarR family transcriptional regulator 2283 77.87 +1 2578182..2578538 - 118 148273461 - CMM_2277 - putative DNA-binding protein 2284 73.61 0 2578549..2579556 - 335 148273462 - CMM_2278 - putative monooxygenase 2285 75.53 0 2579559..2580359 - 266 148273463 - CMM_2279 - amino acid transporter LysE 2286 76.70 0 2580429..2581325 + 298 148273464 - CMM_2280 - LysR family transcriptional regulator 2287 69.85 0 2581363..2582022 - 219 148273465 - CMM_2281 - putative metal ABC transporter, permease component 2288 72.54 0 2582024..2583061 - 345 148273466 - CMM_2282 - putative metal ABC transporter, ATP-binding protein 2289 70.42 0 2583058..2583990 - 310 148273467 - CMM_2283 - putative metal ABC transporter, substrate-binding protein 2290 78.29 +1 2584336..2585238 + 300 148273468 - CMM_2284 - hypothetical protein 2291 68.87 0 2585251..2587068 - 605 148273469 - CMM_2285 - putative ABC transporter, duplicated ATP-binding protein 2292 59.15 -2 2587139..2588842 + 567 148273470 intA CMM_2286 - putative integrase/recombinase 2293 58.09 -2 2589829..2591448 - 539 148273471 - CMM_2287 - hypothetical protein 2294 56.94 -2 2591441..2591923 - 160 148273472 - CMM_2288 - hypothetical protein 2295 58.33 -2 2592071..2593186 - 371 148273473 - CMM_2289 - hypothetical protein 2296 62.22 -2 2594184..2594678 + 164 148273474 - CMM_2290 - putative endonuclease 2297 60.52 -2 2595263..2596027 - 254 148273475 - CMM_2291 - putative endonuclease 2298 57.70 -2 2596073..2597857 - 594 148273476 - CMM_2292 - hypothetical protein 2299 62.25 -2 2598067..2598270 + 67 148273477 - CMM_2293 - hypothetical protein 2300 61.69 -2 2598267..2598668 + 133 148273478 - CMM_2294 - hypothetical protein 2301 56.24 -2 2599259..2599699 + 146 148273479 - CMM_2295 - pilin 2302 63.29 -2 2600459..2601316 - 285 148273480 - CMM_2296 - hypothetical protein 2303 55.36 -2 2602014..2602694 + 226 148273481 - CMM_2297 - putative resolvase 2304 59.44 -2 2602691..2602870 + 59 148273482 - CMM_2298 - hypothetical protein 2305 57.82 -2 2602854..2603441 + 195 148273483 - CMM_2299 - hypothetical protein 2306 59.21 -2 2603570..2604280 + 236 148273484 - CMM_2300 - hypothetical protein 2307 64.68 -2 2605923..2606174 + 83 148273485 - CMM_2301 - hypothetical protein 2308 58.46 -2 2606235..2606807 - 190 148273486 - CMM_2302 - hypothetical protein 2309 54.99 -2 2607098..2607688 - 196 148273487 - CMM_2303 - hypothetical protein 2310 65.09 -1 2607802..2608245 - 147 148273488 - CMM_2304 - hypothetical protein 2311 75.17 0 2609051..2610355 + 434 148273489 - CMM_2305 - putative multidrug-efflux MFS permease 2312 64.91 -1 2610519..2610689 + 56 148273490 - CMM_2306 - hypothetical protein 2313 75.20 0 2610836..2612569 + 577 148273491 - CMM_2307 - hypothetical protein 2314 70.21 0 2612566..2613045 + 159 148273492 - CMM_2308 - hypothetical protein 2315 73.25 0 2612952..2613452 - 166 148273493 - CMM_2309 - hypothetical protein 2316 71.84 0 2613449..2614183 - 244 148273494 - CMM_2310 - putative glycosyl transferase 2317 74.77 0 2615624..2616055 - 143 148273495 moaE CMM_2311 - molybdopterin cofactor biosynthesis protein 2318 79.64 +1 2616052..2616606 - 184 148273496 moaB CMM_2312 - putative molybdenum cofactor biosynthesis protein 2319 71.92 0 2616603..2617097 - 164 148273497 moaC CMM_2313 - putative molybdenum cofactor biosynthesis protein 2320 78.65 +1 2617090..2618382 - 430 148273498 moaA1 CMM_2314 - putative molybdopterin biosynthesis protein 2321 78.22 +1 2618515..2618739 + 74 148273499 - CMM_2315 - hypothetical protein 2322 74.55 0 2618837..2619610 + 257 148273500 - CMM_2316 - putative carboxyphosphonoenolpyruvate phosphonomutase 2323 74.16 0 2619720..2620640 + 306 148273501 - CMM_2317 - putative methylthioadenosine phosphorylase 2324 74.93 0 2620637..2621701 + 354 148273502 galE3 CMM_2318 - putative UDP-glucose 4-epimerase 2325 73.33 0 2621822..2622271 + 149 148273503 - CMM_2319 - hypothetical protein 2326 70.22 0 2622330..2623118 - 262 148273504 - CMM_2320 - putative short chain dehydrogenase/oxidoreductase 2327 74.34 0 2623196..2624224 - 342 148273505 - CMM_2321 - hypothetical protein 2328 74.19 0 2624335..2624799 - 154 148273506 - CMM_2322 - hypothetical protein 2329 76.50 0 2624856..2625038 - 60 148273507 - CMM_2323 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0