version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2199 70.35 0 2487919..2488896 - 325 148273377 - CMM_2193 - putative phosphate/phosphonate ABC transporter,substrate-binding protein 2200 76.84 +1 2488893..2489639 - 248 148273378 - CMM_2194 - putative hydrolase/phosphatase 2201 73.15 0 2489862..2492837 - 991 148273379 gcvP CMM_2195 - glycine dehydrogenase 2202 69.62 0 2492834..2493205 - 123 148273380 gcvH CMM_2196 - glycine cleavage system protein H 2203 75.76 0 2493202..2494422 - 406 148273381 gcvT CMM_2197 - putative aminomethyltransferase (glycine cleavage system T protein) 2204 71.71 0 2494792..2495247 - 151 148273382 - CMM_2198 - hypothetical protein 2205 76.88 +1 2495374..2495745 + 123 148273383 - CMM_2199 - putative transcriptional regulator 2206 76.13 0 2495764..2496534 - 256 148273384 - CMM_2200 - putative copper resistance protein 2207 74.35 0 2496636..2497937 + 433 148273385 - CMM_2201 - putative cysteine desulfurase 2208 74.32 0 2497934..2498377 + 147 148273386 - CMM_2202 - hypothetical protein 2209 76.01 0 2498457..2498852 + 131 148273387 - CMM_2203 - hypothetical protein 2210 74.77 0 2498892..2501741 - 949 148273388 - CMM_2204 - hypothetical protein 2211 77.48 +1 2501901..2502455 - 184 148273389 - CMM_2205 - putative acetyltransferase 2212 78.18 +1 2502502..2503578 + 358 148273390 - CMM_2206 - hypothetical protein 2213 76.77 +1 2503597..2504160 - 187 148273391 - CMM_2207 - hypothetical protein 2214 72.59 0 2504219..2504623 - 134 148273392 - CMM_2208 - hypothetical protein 2215 73.05 0 2504846..2505268 + 140 148273393 - CMM_2209 - MarR family transcriptional regulator 2216 62.53 -2 2505311..2506036 - 241 148273394 - CMM_2210 - hypothetical protein 2217 65.69 -1 2506159..2506773 - 204 148273395 - CMM_2211 - hypothetical protein 2218 68.71 -1 2506863..2508329 + 488 148273396 - CMM_2212 - amino acid permease APC family 2219 74.00 0 2508333..2508782 + 149 148273397 - CMM_2213 - hypothetical protein 2220 66.90 -1 2508793..2509215 - 140 148273398 - CMM_2214 - putative thiol-disulfide oxidoreductase 2221 67.11 -1 2509535..2509981 + 148 148273399 - CMM_2215 - hypothetical protein 2222 65.67 -1 2510037..2510237 - 66 148273400 - CMM_2216 - hypothetical protein 2223 69.07 0 2510689..2512101 + 470 148273401 gabP CMM_2217 - gamma-aminobutyrate permease 2224 75.04 0 2512152..2512844 + 230 148273402 - CMM_2218 - hypothetical protein 2225 70.21 0 2512868..2513431 + 187 148273403 - CMM_2219 - hypothetical protein 2226 72.40 0 2513431..2514198 + 255 148273404 - CMM_2220 - hypothetical protein 2227 53.49 -2 2514367..2515011 + 214 148273405 - CMM_2221 - hypothetical protein 2228 51.44 -2 2515482..2515967 - 161 148273406 - CMM_2222 - hypothetical protein 2229 68.06 -1 2516137..2517210 - 357 148273407 - CMM_2223 - translation-associated GTPase 2230 74.29 0 2517310..2517939 + 209 148273408 - CMM_2224 - hypothetical protein 2231 73.70 0 2518006..2519385 + 459 148273409 - CMM_2225 - hypothetical protein 2232 67.84 -1 2519491..2520516 + 341 148273410 fbaA CMM_2226 - fructose-bisphosphate aldolase 2233 75.63 0 2520612..2521448 - 278 148273411 - CMM_2227 - hypothetical protein 2234 70.71 0 2521445..2522434 - 329 148273412 ispH CMM_2228 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2235 74.03 0 2522582..2523898 + 438 148273413 xseA CMM_2229 - exodeoxyribonuclease VII large subunit 2236 75.72 0 2523909..2524151 + 80 148273414 xseB CMM_2230 - exodeoxyribonuclease VII small subunit 2237 72.32 0 2524154..2524861 + 235 148273415 - CMM_2231 - hypothetical protein 2238 73.15 0 2524858..2525520 + 220 148273416 cynT CMM_2232 - putative carbonic anhydrase 2239 71.44 0 2525602..2527026 + 474 148273417 fumC CMM_2233 - fumarate hydratase 2240 74.81 0 2527058..2527327 + 89 148273418 - CMM_2234 - hypothetical protein 2241 71.39 0 2527411..2528766 - 451 148273419 - CMM_2235 - putative ATPase 2242 70.74 0 2528994..2529779 - 261 148273420 uppS2 CMM_2236 - putative undecaprenyl diphosphate synthase 2243 70.77 0 2529861..2530616 + 251 148273421 - CMM_2237 - HlyIII family membrane protein 2244 70.87 0 2530641..2532020 - 459 148273422 - CMM_2238 - putative sugar ABC transporter, substrate-binding protein 2245 69.95 0 2532082..2532996 - 304 148273423 - CMM_2239 - putative glycerol ABC transporter, permease component 2246 70.30 0 2532993..2533982 - 329 148273424 - CMM_2240 - putative glycerol ABC transporter, permease component 2247 75.94 0 2534162..2534506 - 114 148273425 - CMM_2241 - hypothetical protein 2248 72.68 0 2534506..2535387 - 293 148273426 - CMM_2242 - hypothetical protein 2249 74.33 0 2535454..2535936 + 160 148273427 - CMM_2243 - hypothetical protein 2250 69.94 0 2535997..2536485 + 162 148273428 greA CMM_2244 - transcription elongation factor GreA 2251 73.84 0 2536552..2537820 - 422 148273429 ilvA CMM_2245 - threonine dehydratase 2252 71.93 0 2537925..2539160 - 411 148273430 - CMM_2246 - AI-E2 family membrane protein 2253 76.34 0 2539261..2540511 + 416 148273431 - CMM_2247 - hypothetical protein 2254 66.67 -1 2540522..2541088 - 188 148273432 - CMM_2248 - hypothetical protein 2255 77.18 +1 2541091..2542593 - 500 148273433 bglL CMM_2249 - putative beta-glucosidase 2256 78.69 +1 2542734..2545028 + 764 148273434 - CMM_2250 - hypothetical protein 2257 69.16 0 2545161..2546603 + 480 148273435 - CMM_2251 - amino acid permease APC family 2258 69.75 0 2546679..2547620 - 313 148273436 - CMM_2252 - hypothetical protein 2259 71.04 0 2547805..2550366 - 853 148273437 - CMM_2253 - hypothetical protein 2260 71.72 0 2550438..2550872 - 144 148273438 - CMM_2254 - putative anti-sigma regulatory factor (Ser/Thr protein kinase) 2261 69.62 0 2550877..2551215 - 112 148273439 - CMM_2255 - putative anti-sigma factor antagonist 2262 69.88 0 2551212..2553203 - 663 148273440 - CMM_2256 - putative glycosyl transferase 2263 73.52 0 2553200..2554396 - 398 148273441 - CMM_2257 - putative protein kinase/phosphatase regulator hybrid protein 2264 75.15 0 2554575..2555729 + 384 148273442 - CMM_2258 - putative membrane-bound acyltransferase 2265 71.03 0 2555945..2557432 - 495 148273443 - CMM_2259 - putative NADH dehydrogenase 2266 77.57 +1 2557470..2558753 - 427 148273444 - CMM_2260 - serine peptidase 2267 76.16 0 2558750..2559265 - 171 148273445 - CMM_2261 - hypothetical protein 2268 73.30 0 2559262..2559834 - 190 148273446 - CMM_2262 - hypothetical protein 2269 70.49 0 2559922..2561202 - 426 148273447 eno CMM_2263 - phosphopyruvate hydratase 2270 74.46 0 2561319..2562626 - 435 148273448 hisS CMM_2264 - histidyl-tRNA synthetase 2271 73.99 0 2562639..2563280 - 213 148273449 - CMM_2265 - TetR family transcriptional regulator 2272 75.82 0 2563435..2564199 - 254 148273450 - CMM_2266 - nucleoside triphosphate pyrophosphohydrolase 2273 75.77 0 2564307..2565536 + 409 148273451 nhaA2 CMM_2267 - NhaA family Na+/H+ antiporter 2274 71.68 0 2565560..2569192 - 1210 148273452 mfdA CMM_2268 - putative transcription-repair coupling factor 2275 71.94 0 2569281..2569868 - 195 148273453 pthA CMM_2269 - peptidyl-tRNA hydrolase 2276 68.84 -1 2570009..2570653 - 214 148273454 rplY CMM_2270 - 50S ribosomal protein L25 2277 75.32 0 2570824..2572833 - 669 148273455 - CMM_2271 - putative gluconokinase/dehydrogenase 2278 70.31 0 2572917..2574371 + 484 148273456 gndA2 CMM_2272 - 6-phosphogluconate dehydrogenase 2279 71.47 0 2574441..2574815 + 124 148273457 - CMM_2273 - hypothetical protein 2280 69.12 0 2574861..2575838 - 325 148273458 prsA CMM_2274 - ribose-phosphate pyrophosphokinase 2281 73.01 0 2575853..2577397 - 514 148273459 glmU CMM_2275 - putative UDP-N-acetylglucosamine pyrophosphorylase 2282 73.41 0 2577650..2578153 + 167 148273460 - CMM_2276 - MarR family transcriptional regulator 2283 77.87 +1 2578182..2578538 - 118 148273461 - CMM_2277 - putative DNA-binding protein 2284 73.61 0 2578549..2579556 - 335 148273462 - CMM_2278 - putative monooxygenase 2285 75.53 0 2579559..2580359 - 266 148273463 - CMM_2279 - amino acid transporter LysE 2286 76.70 0 2580429..2581325 + 298 148273464 - CMM_2280 - LysR family transcriptional regulator 2287 69.85 0 2581363..2582022 - 219 148273465 - CMM_2281 - putative metal ABC transporter, permease component 2288 72.54 0 2582024..2583061 - 345 148273466 - CMM_2282 - putative metal ABC transporter, ATP-binding protein 2289 70.42 0 2583058..2583990 - 310 148273467 - CMM_2283 - putative metal ABC transporter, substrate-binding protein 2290 78.29 +1 2584336..2585238 + 300 148273468 - CMM_2284 - hypothetical protein 2291 68.87 0 2585251..2587068 - 605 148273469 - CMM_2285 - putative ABC transporter, duplicated ATP-binding protein 2292 59.15 -2 2587139..2588842 + 567 148273470 intA CMM_2286 - putative integrase/recombinase 2293 58.09 -2 2589829..2591448 - 539 148273471 - CMM_2287 - hypothetical protein 2294 56.94 -2 2591441..2591923 - 160 148273472 - CMM_2288 - hypothetical protein 2295 58.33 -2 2592071..2593186 - 371 148273473 - CMM_2289 - hypothetical protein 2296 62.22 -2 2594184..2594678 + 164 148273474 - CMM_2290 - putative endonuclease 2297 60.52 -2 2595263..2596027 - 254 148273475 - CMM_2291 - putative endonuclease 2298 57.70 -2 2596073..2597857 - 594 148273476 - CMM_2292 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0