version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2082 76.41 0 2344422..2345273 + 283 148273260 - CMM_2078 - hypothetical protein 2083 70.15 0 2345295..2346041 - 248 148273261 - CMM_2079 - glycosyl transferase family protein 2084 68.58 -1 2346231..2346752 + 173 148273262 - CMM_2080 - hypothetical protein 2085 69.80 0 2346772..2348049 - 425 148273263 - CMM_2081 - Mn2+/Fe2+ transporter 2086 69.99 0 2348147..2349622 - 491 148273264 - CMM_2082 - MFS family xanthine/uracil permease 2087 71.43 0 2349748..2349999 - 83 148273265 - CMM_2083 - hypothetical protein 2088 71.40 0 2349996..2351177 - 393 148273266 pitB CMM_2084 - low-affinity inorganic phosphate permease 2089 73.77 0 2351296..2352957 - 553 148273267 lipT CMM_2085 - carboxylesterase 2090 77.40 +1 2352954..2354537 - 527 148273268 - CMM_2086 - hypothetical protein 2091 73.48 0 2354629..2355816 + 395 148273269 - CMM_2087 - hypothetical protein 2092 72.16 0 2355761..2356780 - 339 148273270 - CMM_2088 - putative oxidoreductase 2093 75.90 0 2356917..2357858 - 313 148273271 - CMM_2089 - putative NAD-dependent epimerase/dehydratase 2094 76.05 0 2359330..2360022 - 230 148273272 - CMM_2090 - putative short chain dehydrogenase/oxidoreductase 2095 74.07 0 2360157..2360507 + 116 148273273 - CMM_2091 - hypothetical protein 2096 72.33 0 2360643..2361101 + 152 148273274 hsp20 CMM_2092 - HSP20 family protein 2097 74.45 0 2361212..2363728 - 838 148273275 alcBC CMM_2093 - putative siderophore biosynthesis protein 2098 73.16 0 2363725..2365095 - 456 148273276 alcA CMM_2094 - putative siderophore biosynthesis enzyme/monooxygenase 2099 74.61 0 2365092..2366702 - 536 148273277 - CMM_2095 - L-amino acid decarboxylase 2100 76.60 0 2366913..2367224 + 103 148273278 - CMM_2095A - hypothetical protein 2101 77.12 +1 2367226..2367378 + 50 148273279 - CMM_2095B - hypothetical protein 2102 68.77 -1 2367480..2367764 + 94 148273280 - CMM_2096 - hypothetical protein 2103 73.81 0 2367761..2368054 + 97 148273281 - CMM_2097 - hypothetical protein 2104 70.01 0 2368102..2368998 + 298 148273282 - CMM_2098 - putative short chain dehydrogenase/oxidoreductase 2105 78.83 +1 2369127..2369858 + 243 148273283 - CMM_2099 - hypothetical protein 2106 70.63 0 2370010..2370741 - 243 148273284 - CMM_2100 - hypothetical protein 2107 71.68 0 2371085..2371822 - 245 148273285 - CMM_2101 - hypothetical protein 2108 74.72 0 2372140..2373021 + 293 148273286 - CMM_2102 - 2Fe-2S domain-containing protein 2109 71.46 0 2373103..2374563 - 486 148273287 - CMM_2103 - hypothetical protein 2110 74.44 0 2374595..2375083 - 162 148273288 - CMM_2104 - hypothetical protein 2111 72.03 0 2375265..2375525 + 86 148273289 - CMM_2105 - hypothetical protein 2112 69.25 0 2375647..2376999 + 450 148273290 - CMM_2106 - putative sugar ABC transporter, binding protein 2113 67.94 -1 2376996..2378012 + 338 148273291 - CMM_2107 - putative sugar ABC transporter, permease component 2114 67.08 -1 2378009..2378977 + 322 148273292 - CMM_2108 - putative sugar ABC transporter, permease component 2115 72.66 0 2379114..2382167 + 1017 148273293 lacZ CMM_2109 - beta-galactosidase 2116 71.56 0 2382278..2383564 + 428 148273294 - CMM_2110 - putative sugar alcohol dehydrogenase 2117 69.63 0 2383679..2383948 + 89 148273295 - CMM_2111 - putative glutaredoxin 2118 72.99 0 2383952..2385421 + 489 148273296 - CMM_2112 - putative phosphotransferase 2119 63.11 -2 2385893..2386117 + 74 148273297 - CMM_2113 - hypothetical protein 2120 71.19 0 2386220..2388385 + 721 148273298 ptrB CMM_2114 - putative protease II (oligopeptidase B) 2121 76.57 0 2388531..2389358 + 275 148273299 thiM CMM_2115 - hypothetical protein 2122 76.88 +1 2389355..2391586 + 743 148273300 thiED CMM_2116 - multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase 2123 74.07 0 2391766..2392656 + 296 148273301 - CMM_2117 - putative fusion protein 2124 75.46 0 2392771..2394168 + 465 148273302 - CMM_2118 - putative sugar MFS permease 2125 73.33 0 2394451..2394660 + 69 148273303 - CMM_2119 - hypothetical protein 2126 71.86 0 2394728..2396863 - 711 148273304 - CMM_2120 - putative DNA helicase 2127 72.15 0 2397158..2398306 + 382 148273305 - CMM_2121 - putative glutathione S-transferase 2128 78.24 +1 2398306..2399100 + 264 148273306 - CMM_2122 - putative esterase 2129 72.27 0 2399063..2399437 - 124 148273307 - CMM_2123 - hypothetical protein 2130 75.05 0 2399572..2400084 + 170 148273308 - CMM_2124 - hypothetical protein 2131 75.12 0 2400081..2400482 + 133 148273309 - CMM_2125 - hypothetical protein 2132 74.26 0 2400540..2401580 + 346 148273310 - CMM_2126 - putative Zn-dependant alcohol dehydrogenase 2133 73.27 0 2401596..2401913 - 105 148273311 - CMM_2127 - hypothetical protein 2134 71.57 0 2401961..2403715 - 584 148273312 poxB CMM_2128 - pyruvate dehydrogenase 2135 73.50 0 2403823..2404554 + 243 148273313 - CMM_2129 - hypothetical protein 2136 77.26 +1 2404551..2405513 - 320 148273314 - CMM_2130 - putative Zn-dependant oxidoreductase 2137 77.09 +1 2405657..2406577 + 306 148273315 - CMM_2131 - LysR family transcriptional regulator 2138 76.67 0 2408857..2409756 + 299 148273316 - CMM_2132 - TetR family transcriptional regulator 2139 77.31 +1 2409753..2410391 - 212 148273317 - CMM_2133 - putative lipase/esterase 2140 76.89 +1 2410435..2410884 - 149 148273318 - CMM_2134 - hypothetical protein 2141 73.02 0 2410881..2412407 - 508 148273319 - CMM_2135 - hypothetical protein 2142 74.67 0 2412481..2413242 - 253 148273320 - CMM_2136 - hypothetical protein 2143 75.61 0 2413422..2414360 + 312 148273321 - CMM_2137 - putative sugarkinase 2144 73.41 0 2414413..2416014 - 533 148273322 - CMM_2138 - hypothetical protein 2145 73.46 0 2416143..2417408 - 421 148273323 cynX CMM_2139 - MFS family permease 2146 76.27 0 2417443..2418129 + 228 148273324 - CMM_2140 - hypothetical protein 2147 74.81 0 2418126..2419058 - 310 148273325 ribF CMM_2141 - bifunctional riboflavin kinase/FMN adenylyltransferase 2148 72.08 0 2419061..2419522 - 153 148273326 - CMM_2142 - hypothetical protein 2149 69.38 0 2419560..2419928 - 122 148273327 - CMM_2143 - hypothetical protein 2150 75.10 0 2419925..2420884 - 319 148273328 truB CMM_2144 - tRNA pseudouridine synthase B 2151 76.20 0 2420971..2421966 + 331 148273329 apbA CMM_2145 - 2-dehydropantoate 2-reductase 2152 76.01 0 2422016..2422582 - 188 148273330 - CMM_2146 - hypothetical protein 2153 76.91 +1 2422621..2423499 + 292 148273331 mutY CMM_2147 - A/G-specific adenine glycosylase 2154 70.46 0 2423544..2424044 - 166 148273332 rbfA CMM_2148 - ribosome-binding factor A 2155 72.56 0 2424224..2427058 - 944 148273333 infB CMM_2149 - translation initiation factor IF-2 2156 71.43 0 2427155..2427448 - 97 148273334 - CMM_2150 - putative nucleic-acid-binding protein 2157 70.34 0 2427499..2428506 - 335 148273335 nusA CMM_2151 - transcription elongation factor NusA 2158 71.91 0 2428593..2430365 - 590 148273336 proS CMM_2152 - prolyl-tRNA synthetase 2159 77.94 +1 2430397..2431398 - 333 148273337 - CMM_2153 - putative NAD(P)H steroid dehydrogenase/isomerase 2160 78.53 +1 2431395..2434067 - 890 148273338 - CMM_2154 - putative acyl-CoA synthetase 2161 70.74 0 2434075..2435106 - 343 148273339 - CMM_2155 - 3-oxoacyl-(acyl carrier protein) synthase III 2162 68.76 -1 2435214..2436359 - 381 148273340 ispG CMM_2156 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2163 72.45 0 2436450..2437868 - 472 148273341 - CMM_2157 - M50 family zinc metalloprotease 2164 75.54 0 2438004..2439254 + 416 148273342 pknF CMM_2158 - putative serine/threonine protein kinase 2165 77.94 +1 2439251..2439862 + 203 148273343 - CMM_2159 - hypothetical protein 2166 73.04 0 2439980..2441062 - 360 148273344 dxrA CMM_2160 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2167 72.63 0 2441071..2442093 - 340 148273345 - CMM_2161 - putative peptidylprolyl isomerase 2168 72.63 0 2442228..2442713 - 161 148273346 - CMM_2162 - hypothetical protein 2169 72.81 0 2442785..2444200 + 471 148273347 gabT CMM_2163 - putative 4-aminobutyrate aminotransferase 2170 74.38 0 2444200..2445210 + 336 148273348 - CMM_2164 - putative asparaginase II 2171 79.78 +1 2445200..2448691 - 1163 148273349 - CMM_2165 - hypothetical protein 2172 79.32 +1 2448782..2451325 - 847 148273350 - CMM_2166 - hypothetical protein 2173 78.30 +1 2451322..2452782 - 486 148273351 - CMM_2167 - hypothetical protein 2174 74.23 0 2452779..2453822 - 347 148273352 - CMM_2168 - MoxR-like ATPase, putative regulator 2175 76.82 +1 2453881..2459895 - 2004 148273353 - CMM_2169 - putative RTX toxin 2176 76.97 +1 2459892..2461463 - 523 148273354 pknG CMM_2170 - hypothetical protein 2177 68.85 0 2461621..2462946 - 441 148273355 gltA CMM_2171 - type II citrate synthase 2178 76.10 0 2463108..2464241 - 377 148273356 - CMM_2172 - N-succinyldiaminopimelate aminotransferase 2179 67.91 -1 2464238..2464558 - 106 148273357 fdxB CMM_2173 - hypothetical protein 2180 76.64 0 2464599..2465891 - 430 148273358 - CMM_2174 - hypothetical protein 2181 74.78 0 2466135..2467046 + 303 148273359 - CMM_2175 - OFeT family Fe2+ permease 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.