version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2050 69.70 0 2310069..2312342 - 757 148273228 pnpA CMM_2047 - polynucleotide phosphorylase/polyadenylase 2051 66.67 -1 2312820..2313089 - 89 148273229 rpsO CMM_2048 - 30S ribosomal protein S15 2052 72.20 0 2313325..2314626 + 433 148273230 - CMM_2049 - putative MFS permease 2053 76.23 0 2314653..2315384 + 243 148273231 - CMM_2050 - hypothetical protein 2054 73.46 0 2315628..2317202 - 524 148273232 - CMM_2051 - 2-oxoglutarate/malate translocator 2055 74.44 0 2317307..2319583 - 758 148273233 - CMM_2052 - putative ATP-dependent DNA helicase 2056 73.42 0 2319688..2320176 - 162 148273234 - CMM_2053 - hypothetical protein 2057 71.83 0 2320419..2321678 + 419 148273235 metE2 CMM_2054 - 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase 2058 76.70 0 2321683..2322210 - 175 148273236 aptA CMM_2055 - adenine phosphoribosyltransferase 2059 77.19 +1 2322317..2323048 + 243 148273237 - CMM_2056 - hypothetical protein 2060 71.34 0 2323130..2323963 - 277 148273238 - CMM_2057 - putative 2,5-diketo-D-gluconic acid reductase 2061 73.82 0 2323986..2324600 - 204 148273239 lspA CMM_2058 - putative lipoprotein signal peptidase 2062 76.89 +1 2324610..2325137 - 175 148273240 - CMM_2059 - hypothetical protein 2063 70.02 0 2325185..2325751 - 188 148273241 - CMM_2060 - cysteine peptidase family protein C56 2064 72.13 0 2325834..2326712 - 292 148273242 - CMM_2061 - hypothetical protein 2065 68.81 -1 2326956..2327516 + 186 148273243 dpsB CMM_2062 - putative DNA-binding ferritin-like protein 2066 69.55 0 2327638..2328435 + 265 148273244 - CMM_2063 - short chain dehydrogenase/oxidoreductase 2067 64.76 -2 2328435..2328644 + 69 148273245 - CMM_2064 - hypothetical protein 2068 76.36 0 2328724..2329971 + 415 148273246 - CMM_2065 - putative two-component system sensor kinase 2069 74.51 0 2329968..2330630 + 220 148273247 - CMM_2066 - putative two-component system response regulator 2070 77.92 +1 2330668..2332107 - 479 148273248 dacB CMM_2067 - D-alanyl-D-alanine carboxypeptidase 2071 76.62 0 2332162..2332794 - 210 148273249 - CMM_2068 - putative DNA-invertase/recombinase 2072 69.89 0 2332896..2333174 - 92 148273250 - CMM_2069 - hypothetical protein 2073 74.30 0 2333276..2334481 - 401 148273251 - CMM_2070 - hypothetical protein 2074 75.84 0 2334589..2336016 - 475 148273252 - CMM_2071 - putative FAD/FMN-containing dehydrogenase 2075 77.78 +1 2336075..2337010 + 311 148273253 - CMM_2072 - putative DNA glycosylase 2076 69.62 0 2337014..2338063 - 349 148273254 - CMM_2073 - hypothetical protein 2077 74.87 0 2338121..2340619 + 832 148273255 - CMM_2074 - ATP-dependent DNA ligase 2078 70.88 0 2340710..2341588 + 292 148273256 - CMM_2075 - putative hydrolase 2079 70.29 0 2341631..2341768 + 45 148273257 - CMM_2075A - hypothetical protein 2080 77.01 +1 2341812..2342720 + 302 148273258 - CMM_2076 - hypothetical protein 2081 69.96 0 2342798..2344315 - 505 148273259 aspA CMM_2077 - aspartate ammonia-lyase 2082 76.41 0 2344422..2345273 + 283 148273260 - CMM_2078 - hypothetical protein 2083 70.15 0 2345295..2346041 - 248 148273261 - CMM_2079 - glycosyl transferase family protein 2084 68.58 -1 2346231..2346752 + 173 148273262 - CMM_2080 - hypothetical protein 2085 69.80 0 2346772..2348049 - 425 148273263 - CMM_2081 - Mn2+/Fe2+ transporter 2086 69.99 0 2348147..2349622 - 491 148273264 - CMM_2082 - MFS family xanthine/uracil permease 2087 71.43 0 2349748..2349999 - 83 148273265 - CMM_2083 - hypothetical protein 2088 71.40 0 2349996..2351177 - 393 148273266 pitB CMM_2084 - low-affinity inorganic phosphate permease 2089 73.77 0 2351296..2352957 - 553 148273267 lipT CMM_2085 - carboxylesterase 2090 77.40 +1 2352954..2354537 - 527 148273268 - CMM_2086 - hypothetical protein 2091 73.48 0 2354629..2355816 + 395 148273269 - CMM_2087 - hypothetical protein 2092 72.16 0 2355761..2356780 - 339 148273270 - CMM_2088 - putative oxidoreductase 2093 75.90 0 2356917..2357858 - 313 148273271 - CMM_2089 - putative NAD-dependent epimerase/dehydratase 2094 76.05 0 2359330..2360022 - 230 148273272 - CMM_2090 - putative short chain dehydrogenase/oxidoreductase 2095 74.07 0 2360157..2360507 + 116 148273273 - CMM_2091 - hypothetical protein 2096 72.33 0 2360643..2361101 + 152 148273274 hsp20 CMM_2092 - HSP20 family protein 2097 74.45 0 2361212..2363728 - 838 148273275 alcBC CMM_2093 - putative siderophore biosynthesis protein 2098 73.16 0 2363725..2365095 - 456 148273276 alcA CMM_2094 - putative siderophore biosynthesis enzyme/monooxygenase 2099 74.61 0 2365092..2366702 - 536 148273277 - CMM_2095 - L-amino acid decarboxylase 2100 76.60 0 2366913..2367224 + 103 148273278 - CMM_2095A - hypothetical protein 2101 77.12 +1 2367226..2367378 + 50 148273279 - CMM_2095B - hypothetical protein 2102 68.77 -1 2367480..2367764 + 94 148273280 - CMM_2096 - hypothetical protein 2103 73.81 0 2367761..2368054 + 97 148273281 - CMM_2097 - hypothetical protein 2104 70.01 0 2368102..2368998 + 298 148273282 - CMM_2098 - putative short chain dehydrogenase/oxidoreductase 2105 78.83 +1 2369127..2369858 + 243 148273283 - CMM_2099 - hypothetical protein 2106 70.63 0 2370010..2370741 - 243 148273284 - CMM_2100 - hypothetical protein 2107 71.68 0 2371085..2371822 - 245 148273285 - CMM_2101 - hypothetical protein 2108 74.72 0 2372140..2373021 + 293 148273286 - CMM_2102 - 2Fe-2S domain-containing protein 2109 71.46 0 2373103..2374563 - 486 148273287 - CMM_2103 - hypothetical protein 2110 74.44 0 2374595..2375083 - 162 148273288 - CMM_2104 - hypothetical protein 2111 72.03 0 2375265..2375525 + 86 148273289 - CMM_2105 - hypothetical protein 2112 69.25 0 2375647..2376999 + 450 148273290 - CMM_2106 - putative sugar ABC transporter, binding protein 2113 67.94 -1 2376996..2378012 + 338 148273291 - CMM_2107 - putative sugar ABC transporter, permease component 2114 67.08 -1 2378009..2378977 + 322 148273292 - CMM_2108 - putative sugar ABC transporter, permease component 2115 72.66 0 2379114..2382167 + 1017 148273293 lacZ CMM_2109 - beta-galactosidase 2116 71.56 0 2382278..2383564 + 428 148273294 - CMM_2110 - putative sugar alcohol dehydrogenase 2117 69.63 0 2383679..2383948 + 89 148273295 - CMM_2111 - putative glutaredoxin 2118 72.99 0 2383952..2385421 + 489 148273296 - CMM_2112 - putative phosphotransferase 2119 63.11 -2 2385893..2386117 + 74 148273297 - CMM_2113 - hypothetical protein 2120 71.19 0 2386220..2388385 + 721 148273298 ptrB CMM_2114 - putative protease II (oligopeptidase B) 2121 76.57 0 2388531..2389358 + 275 148273299 thiM CMM_2115 - hypothetical protein 2122 76.88 +1 2389355..2391586 + 743 148273300 thiED CMM_2116 - multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase 2123 74.07 0 2391766..2392656 + 296 148273301 - CMM_2117 - putative fusion protein 2124 75.46 0 2392771..2394168 + 465 148273302 - CMM_2118 - putative sugar MFS permease 2125 73.33 0 2394451..2394660 + 69 148273303 - CMM_2119 - hypothetical protein 2126 71.86 0 2394728..2396863 - 711 148273304 - CMM_2120 - putative DNA helicase 2127 72.15 0 2397158..2398306 + 382 148273305 - CMM_2121 - putative glutathione S-transferase 2128 78.24 +1 2398306..2399100 + 264 148273306 - CMM_2122 - putative esterase 2129 72.27 0 2399063..2399437 - 124 148273307 - CMM_2123 - hypothetical protein 2130 75.05 0 2399572..2400084 + 170 148273308 - CMM_2124 - hypothetical protein 2131 75.12 0 2400081..2400482 + 133 148273309 - CMM_2125 - hypothetical protein 2132 74.26 0 2400540..2401580 + 346 148273310 - CMM_2126 - putative Zn-dependant alcohol dehydrogenase 2133 73.27 0 2401596..2401913 - 105 148273311 - CMM_2127 - hypothetical protein 2134 71.57 0 2401961..2403715 - 584 148273312 poxB CMM_2128 - pyruvate dehydrogenase 2135 73.50 0 2403823..2404554 + 243 148273313 - CMM_2129 - hypothetical protein 2136 77.26 +1 2404551..2405513 - 320 148273314 - CMM_2130 - putative Zn-dependant oxidoreductase 2137 77.09 +1 2405657..2406577 + 306 148273315 - CMM_2131 - LysR family transcriptional regulator 2138 76.67 0 2408857..2409756 + 299 148273316 - CMM_2132 - TetR family transcriptional regulator 2139 77.31 +1 2409753..2410391 - 212 148273317 - CMM_2133 - putative lipase/esterase 2140 76.89 +1 2410435..2410884 - 149 148273318 - CMM_2134 - hypothetical protein 2141 73.02 0 2410881..2412407 - 508 148273319 - CMM_2135 - hypothetical protein 2142 74.67 0 2412481..2413242 - 253 148273320 - CMM_2136 - hypothetical protein 2143 75.61 0 2413422..2414360 + 312 148273321 - CMM_2137 - putative sugarkinase 2144 73.41 0 2414413..2416014 - 533 148273322 - CMM_2138 - hypothetical protein 2145 73.46 0 2416143..2417408 - 421 148273323 cynX CMM_2139 - MFS family permease 2146 76.27 0 2417443..2418129 + 228 148273324 - CMM_2140 - hypothetical protein 2147 74.81 0 2418126..2419058 - 310 148273325 ribF CMM_2141 - bifunctional riboflavin kinase/FMN adenylyltransferase 2148 72.08 0 2419061..2419522 - 153 148273326 - CMM_2142 - hypothetical protein 2149 69.38 0 2419560..2419928 - 122 148273327 - CMM_2143 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0