version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2013 63.08 -2 2274124..2274318 - 64 148273191 rpmI CMM_2010 - 50S ribosomal protein L35 2014 63.33 -2 2274311..2274730 - 139 148273192 infC CMM_2011 - translation initiation factor IF-3 2015 75.10 0 2275284..2275769 + 161 148273193 - CMM_2012 - hypothetical protein 2016 75.65 0 2275809..2276576 - 255 148273194 - CMM_2013 - hypothetical protein 2017 73.73 0 2276573..2277322 - 249 148273195 hisA CMM_2014 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2018 74.45 0 2277386..2278027 - 213 148273196 hisH CMM_2015 - imidazole glycerol phosphate synthase subunit HisH 2019 69.62 0 2278024..2278632 - 202 148273197 hisB CMM_2016 - imidazoleglycerol-phosphate dehydratase 2020 74.94 0 2278745..2279143 - 132 148273198 - CMM_2017 - hypothetical protein 2021 70.78 0 2279505..2280185 + 226 148273199 lexA CMM_2018 - SOS repressor protein 2022 71.97 0 2280270..2281835 - 521 148273200 hflX CMM_2019 - putative GTP-binding protein 2023 73.21 0 2281876..2282502 + 208 148273201 - CMM_2020 - hypothetical protein 2024 73.38 0 2282551..2283429 - 292 148273202 dapF CMM_2021 - diaminopimelate epimerase 2025 74.68 0 2283439..2284362 - 307 148273203 miaA CMM_2022 - hypothetical protein 2026 72.09 0 2284359..2285945 - 528 148273204 miaB CMM_2023 - putative methylthioadenine synthetase 2027 72.95 0 2285996..2286568 - 190 148273205 recX CMM_2024 - hypothetical protein 2028 68.69 -1 2287165..2288253 - 362 148273206 recA CMM_2025 - recombinase A 2029 76.07 0 2288536..2288769 - 77 148273207 - CMM_2026 - hypothetical protein 2030 68.93 0 2288846..2289154 - 102 148273208 - CMM_2027 - Cro/CI family transcriptional regulator 2031 74.67 0 2289294..2289818 - 174 148273209 - CMM_2028 - hypothetical protein 2032 72.57 0 2289815..2290441 - 208 148273210 pgsA CMM_2029 - hypothetical protein 2033 72.30 0 2290445..2293300 - 951 148273211 ftsK CMM_2030 - cell division protein 2034 72.91 0 2293369..2294601 - 410 148273212 - CMM_2031 - putative ABC transporter, permease component 2035 72.74 0 2294598..2295305 - 235 148273213 - CMM_2032 - putative ABC transporter, ATPase component 2036 74.46 0 2295302..2296327 - 341 148273214 - CMM_2033 - hypothetical protein 2037 68.63 -1 2296540..2298216 - 558 148273215 - CMM_2034 - metallo-beta-lactamase family hydrolase 2038 71.08 0 2298275..2299249 - 324 148273216 dapA CMM_2035 - putative dihydrodipicolinate synthase 2039 74.56 0 2299389..2300642 + 417 148273217 - CMM_2036 - hypothetical protein 2040 68.06 -1 2300672..2301463 - 263 148273218 thyX CMM_2037 - FAD-dependent thymidylate synthase 2041 75.14 0 2301571..2302491 + 306 148273219 - CMM_2038 - putative nucleoside-diphosphate sugar epimerase 2042 74.89 0 2302512..2302961 - 149 148273220 - CMM_2039 - hypothetical protein 2043 72.78 0 2302961..2303794 - 277 148273221 dapB CMM_2040 - hypothetical protein 2044 69.98 0 2303854..2304456 - 200 148273222 gmpB CMM_2041 - hypothetical protein 2045 72.49 0 2304465..2305820 - 451 148273223 pepR CMM_2042 - M16 family metallopeptidase 2046 69.86 0 2305884..2306792 - 302 148273224 - CMM_2043 - hypothetical protein 2047 73.98 0 2307500..2308606 - 368 148273225 - CMM_2044 - putative oxidoreductase 2048 74.76 0 2309060..2309590 + 176 148273226 - CMM_2045 - hypothetical protein 2049 78.04 +1 2309613..2309999 + 128 148273227 - CMM_2046 - hypothetical protein 2050 69.70 0 2310069..2312342 - 757 148273228 pnpA CMM_2047 - polynucleotide phosphorylase/polyadenylase 2051 66.67 -1 2312820..2313089 - 89 148273229 rpsO CMM_2048 - 30S ribosomal protein S15 2052 72.20 0 2313325..2314626 + 433 148273230 - CMM_2049 - putative MFS permease 2053 76.23 0 2314653..2315384 + 243 148273231 - CMM_2050 - hypothetical protein 2054 73.46 0 2315628..2317202 - 524 148273232 - CMM_2051 - 2-oxoglutarate/malate translocator 2055 74.44 0 2317307..2319583 - 758 148273233 - CMM_2052 - putative ATP-dependent DNA helicase 2056 73.42 0 2319688..2320176 - 162 148273234 - CMM_2053 - hypothetical protein 2057 71.83 0 2320419..2321678 + 419 148273235 metE2 CMM_2054 - 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase 2058 76.70 0 2321683..2322210 - 175 148273236 aptA CMM_2055 - adenine phosphoribosyltransferase 2059 77.19 +1 2322317..2323048 + 243 148273237 - CMM_2056 - hypothetical protein 2060 71.34 0 2323130..2323963 - 277 148273238 - CMM_2057 - putative 2,5-diketo-D-gluconic acid reductase 2061 73.82 0 2323986..2324600 - 204 148273239 lspA CMM_2058 - putative lipoprotein signal peptidase 2062 76.89 +1 2324610..2325137 - 175 148273240 - CMM_2059 - hypothetical protein 2063 70.02 0 2325185..2325751 - 188 148273241 - CMM_2060 - cysteine peptidase family protein C56 2064 72.13 0 2325834..2326712 - 292 148273242 - CMM_2061 - hypothetical protein 2065 68.81 -1 2326956..2327516 + 186 148273243 dpsB CMM_2062 - putative DNA-binding ferritin-like protein 2066 69.55 0 2327638..2328435 + 265 148273244 - CMM_2063 - short chain dehydrogenase/oxidoreductase 2067 64.76 -2 2328435..2328644 + 69 148273245 - CMM_2064 - hypothetical protein 2068 76.36 0 2328724..2329971 + 415 148273246 - CMM_2065 - putative two-component system sensor kinase 2069 74.51 0 2329968..2330630 + 220 148273247 - CMM_2066 - putative two-component system response regulator 2070 77.92 +1 2330668..2332107 - 479 148273248 dacB CMM_2067 - D-alanyl-D-alanine carboxypeptidase 2071 76.62 0 2332162..2332794 - 210 148273249 - CMM_2068 - putative DNA-invertase/recombinase 2072 69.89 0 2332896..2333174 - 92 148273250 - CMM_2069 - hypothetical protein 2073 74.30 0 2333276..2334481 - 401 148273251 - CMM_2070 - hypothetical protein 2074 75.84 0 2334589..2336016 - 475 148273252 - CMM_2071 - putative FAD/FMN-containing dehydrogenase 2075 77.78 +1 2336075..2337010 + 311 148273253 - CMM_2072 - putative DNA glycosylase 2076 69.62 0 2337014..2338063 - 349 148273254 - CMM_2073 - hypothetical protein 2077 74.87 0 2338121..2340619 + 832 148273255 - CMM_2074 - ATP-dependent DNA ligase 2078 70.88 0 2340710..2341588 + 292 148273256 - CMM_2075 - putative hydrolase 2079 70.29 0 2341631..2341768 + 45 148273257 - CMM_2075A - hypothetical protein 2080 77.01 +1 2341812..2342720 + 302 148273258 - CMM_2076 - hypothetical protein 2081 69.96 0 2342798..2344315 - 505 148273259 aspA CMM_2077 - aspartate ammonia-lyase 2082 76.41 0 2344422..2345273 + 283 148273260 - CMM_2078 - hypothetical protein 2083 70.15 0 2345295..2346041 - 248 148273261 - CMM_2079 - glycosyl transferase family protein 2084 68.58 -1 2346231..2346752 + 173 148273262 - CMM_2080 - hypothetical protein 2085 69.80 0 2346772..2348049 - 425 148273263 - CMM_2081 - Mn2+/Fe2+ transporter 2086 69.99 0 2348147..2349622 - 491 148273264 - CMM_2082 - MFS family xanthine/uracil permease 2087 71.43 0 2349748..2349999 - 83 148273265 - CMM_2083 - hypothetical protein 2088 71.40 0 2349996..2351177 - 393 148273266 pitB CMM_2084 - low-affinity inorganic phosphate permease 2089 73.77 0 2351296..2352957 - 553 148273267 lipT CMM_2085 - carboxylesterase 2090 77.40 +1 2352954..2354537 - 527 148273268 - CMM_2086 - hypothetical protein 2091 73.48 0 2354629..2355816 + 395 148273269 - CMM_2087 - hypothetical protein 2092 72.16 0 2355761..2356780 - 339 148273270 - CMM_2088 - putative oxidoreductase 2093 75.90 0 2356917..2357858 - 313 148273271 - CMM_2089 - putative NAD-dependent epimerase/dehydratase 2094 76.05 0 2359330..2360022 - 230 148273272 - CMM_2090 - putative short chain dehydrogenase/oxidoreductase 2095 74.07 0 2360157..2360507 + 116 148273273 - CMM_2091 - hypothetical protein 2096 72.33 0 2360643..2361101 + 152 148273274 hsp20 CMM_2092 - HSP20 family protein 2097 74.45 0 2361212..2363728 - 838 148273275 alcBC CMM_2093 - putative siderophore biosynthesis protein 2098 73.16 0 2363725..2365095 - 456 148273276 alcA CMM_2094 - putative siderophore biosynthesis enzyme/monooxygenase 2099 74.61 0 2365092..2366702 - 536 148273277 - CMM_2095 - L-amino acid decarboxylase 2100 76.60 0 2366913..2367224 + 103 148273278 - CMM_2095A - hypothetical protein 2101 77.12 +1 2367226..2367378 + 50 148273279 - CMM_2095B - hypothetical protein 2102 68.77 -1 2367480..2367764 + 94 148273280 - CMM_2096 - hypothetical protein 2103 73.81 0 2367761..2368054 + 97 148273281 - CMM_2097 - hypothetical protein 2104 70.01 0 2368102..2368998 + 298 148273282 - CMM_2098 - putative short chain dehydrogenase/oxidoreductase 2105 78.83 +1 2369127..2369858 + 243 148273283 - CMM_2099 - hypothetical protein 2106 70.63 0 2370010..2370741 - 243 148273284 - CMM_2100 - hypothetical protein 2107 71.68 0 2371085..2371822 - 245 148273285 - CMM_2101 - hypothetical protein 2108 74.72 0 2372140..2373021 + 293 148273286 - CMM_2102 - 2Fe-2S domain-containing protein 2109 71.46 0 2373103..2374563 - 486 148273287 - CMM_2103 - hypothetical protein 2110 74.44 0 2374595..2375083 - 162 148273288 - CMM_2104 - hypothetical protein 2111 72.03 0 2375265..2375525 + 86 148273289 - CMM_2105 - hypothetical protein 2112 69.25 0 2375647..2376999 + 450 148273290 - CMM_2106 - putative sugar ABC transporter, binding protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0