version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1966 73.31 0 2217132..2217884 - 250 148273144 clvG CMM_1963 - hypothetical protein 1967 71.56 0 2217881..2218780 - 299 148273145 clvF CMM_1964 - putative ABC transporter, ATP-binding protein 1968 73.78 0 2218934..2219608 - 224 148273146 clvR CMM_1965 - putative two-component system, response regulator 1969 75.11 0 2219605..2220741 - 378 148273147 clvK CMM_1966 - putative two-component system, sensor kinase 1970 65.70 -1 2221103..2221309 + 68 148273148 clvA CMM_1967 - putative lantibiotic precursor 1971 77.17 +1 2221401..2224562 + 1053 148273149 clvM CMM_1968 - putative lantibiotic modifying enzyme 1972 75.02 0 2224627..2225943 - 438 148273150 - CMM_1969 - hypothetical protein 1973 69.46 0 2226073..2226537 - 154 148273151 - CMM_1970 - putative patch repair endonuclease 1974 54.11 -2 2226747..2228012 - 421 148273152 - CMM_1971 - hypothetical protein 1975 70.37 0 2228593..2229132 - 179 148273153 - CMM_1972 - hypothetical protein 1976 72.75 0 2229419..2230750 + 443 148273154 - CMM_1973 - putative acyl-CoA dehydrogenase 1977 70.84 0 2230864..2232372 - 502 148273155 engA CMM_1974 - GTP-binding protein EngA 1978 69.68 0 2232412..2233140 - 242 148273156 cmkA CMM_1975 - putative cytidylate kinase 1979 75.86 0 2233137..2234213 - 358 148273157 - CMM_1976 - prephenate dehydrogenase 1980 72.94 0 2234252..2235112 - 286 148273158 rluA CMM_1977 - putative pseudouridine synthase 1981 71.57 0 2235096..2235707 - 203 148273159 - CMM_1978 - putative transcriptional regulator 1982 72.68 0 2235697..2236494 - 265 148273160 - CMM_1979 - hypothetical protein 1983 69.94 0 2236550..2237434 - 294 148273161 - CMM_1980 - putative ATPase involved in partitioning 1984 75.38 0 2237504..2238490 - 328 148273162 xerD CMM_1981 - site-specific tyrosine recombinase XerD 1985 73.45 0 2238487..2239164 - 225 148273163 - CMM_1982 - putative NTP pyrophosphatase 1986 70.11 0 2239161..2240903 - 580 148273164 pyrG CMM_1983 - CTP synthetase 1987 75.82 0 2240977..2242692 - 571 148273165 recN CMM_1984 - putative DNA repair protein 1988 72.22 0 2242685..2243602 - 305 148273166 ppnK CMM_1985 - inorganic polyphosphate/ATP-NAD kinase 1989 74.86 0 2243608..2244486 - 292 148273167 - CMM_1986 - hypothetical protein 1990 78.10 +1 2244479..2244688 - 69 148273168 - CMM_1987 - hypothetical protein 1991 73.78 0 2244698..2245738 - 346 148273169 - CMM_1988 - putative hydrolase 1992 71.76 0 2245728..2246708 - 326 148273170 - CMM_1989 - hypothetical protein 1993 69.81 0 2253555..2254859 - 434 148273171 tyrS CMM_1990 - hypothetical protein 1994 76.69 0 2255079..2255786 + 235 148273172 - CMM_1991 - hypothetical protein 1995 76.17 0 2255783..2256382 + 199 148273173 - CMM_1992 - hypothetical protein 1996 77.24 +1 2256413..2257027 - 204 148273174 - CMM_1993 - 3-methyladenine DNA glycosylase 1997 72.46 0 2257035..2257172 - 45 148273175 - CMM_1994 - hypothetical protein 1998 73.96 0 2257169..2258662 - 497 148273176 argH CMM_1995 - argininosuccinate lyase 1999 70.30 0 2258667..2259905 - 412 148273177 argG CMM_1996 - argininosuccinate synthase 2000 72.19 0 2259954..2260877 - 307 148273178 argF CMM_1997 - ornithine carbamoyltransferase 2001 74.47 0 2261027..2262244 - 405 148273179 argD CMM_1998 - acetylornithine aminotransferase 2002 72.15 0 2262241..2263152 - 303 148273180 argB CMM_1999 - acetylglutamate kinase 2003 72.81 0 2263176..2264330 - 384 148273181 argJ CMM_2000 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 2004 74.10 0 2264327..2265376 - 349 148273182 argC CMM_2001 - N-acetyl-gamma-glutamyl-phosphate reductase 2005 75.86 0 2265506..2268049 - 847 148273183 pheT CMM_2002 - hypothetical protein 2006 71.97 0 2268052..2269089 - 345 148273184 pheS CMM_2003 - phenylalanyl-tRNA synthetase subunit alpha 2007 69.70 0 2269218..2270042 - 274 148273185 gluD CMM_2004 - putative glutamate ABC transpoter, permease component 2008 66.82 -1 2270039..2270686 - 215 148273186 gluC CMM_2005 - putative glutamate ABC transpoter, permease component 2009 69.05 0 2270804..2271727 - 307 148273187 gluB CMM_2006 - putative glutamate ABC transporter, substrate-binding protein 2010 68.44 -1 2271882..2272670 - 262 148273188 gluA CMM_2007 - putative glutamate ABC transporter, ATP-binding protein 2011 73.28 0 2272822..2273622 - 266 148273189 - CMM_2008 - putaive rRNA methyltransferase 2012 71.25 0 2273685..2274077 - 130 148273190 rplT CMM_2009 - 50S ribosomal protein L20 2013 63.08 -2 2274124..2274318 - 64 148273191 rpmI CMM_2010 - 50S ribosomal protein L35 2014 63.33 -2 2274311..2274730 - 139 148273192 infC CMM_2011 - translation initiation factor IF-3 2015 75.10 0 2275284..2275769 + 161 148273193 - CMM_2012 - hypothetical protein 2016 75.65 0 2275809..2276576 - 255 148273194 - CMM_2013 - hypothetical protein 2017 73.73 0 2276573..2277322 - 249 148273195 hisA CMM_2014 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2018 74.45 0 2277386..2278027 - 213 148273196 hisH CMM_2015 - imidazole glycerol phosphate synthase subunit HisH 2019 69.62 0 2278024..2278632 - 202 148273197 hisB CMM_2016 - imidazoleglycerol-phosphate dehydratase 2020 74.94 0 2278745..2279143 - 132 148273198 - CMM_2017 - hypothetical protein 2021 70.78 0 2279505..2280185 + 226 148273199 lexA CMM_2018 - SOS repressor protein 2022 71.97 0 2280270..2281835 - 521 148273200 hflX CMM_2019 - putative GTP-binding protein 2023 73.21 0 2281876..2282502 + 208 148273201 - CMM_2020 - hypothetical protein 2024 73.38 0 2282551..2283429 - 292 148273202 dapF CMM_2021 - diaminopimelate epimerase 2025 74.68 0 2283439..2284362 - 307 148273203 miaA CMM_2022 - hypothetical protein 2026 72.09 0 2284359..2285945 - 528 148273204 miaB CMM_2023 - putative methylthioadenine synthetase 2027 72.95 0 2285996..2286568 - 190 148273205 recX CMM_2024 - hypothetical protein 2028 68.69 -1 2287165..2288253 - 362 148273206 recA CMM_2025 - recombinase A 2029 76.07 0 2288536..2288769 - 77 148273207 - CMM_2026 - hypothetical protein 2030 68.93 0 2288846..2289154 - 102 148273208 - CMM_2027 - Cro/CI family transcriptional regulator 2031 74.67 0 2289294..2289818 - 174 148273209 - CMM_2028 - hypothetical protein 2032 72.57 0 2289815..2290441 - 208 148273210 pgsA CMM_2029 - hypothetical protein 2033 72.30 0 2290445..2293300 - 951 148273211 ftsK CMM_2030 - cell division protein 2034 72.91 0 2293369..2294601 - 410 148273212 - CMM_2031 - putative ABC transporter, permease component 2035 72.74 0 2294598..2295305 - 235 148273213 - CMM_2032 - putative ABC transporter, ATPase component 2036 74.46 0 2295302..2296327 - 341 148273214 - CMM_2033 - hypothetical protein 2037 68.63 -1 2296540..2298216 - 558 148273215 - CMM_2034 - metallo-beta-lactamase family hydrolase 2038 71.08 0 2298275..2299249 - 324 148273216 dapA CMM_2035 - putative dihydrodipicolinate synthase 2039 74.56 0 2299389..2300642 + 417 148273217 - CMM_2036 - hypothetical protein 2040 68.06 -1 2300672..2301463 - 263 148273218 thyX CMM_2037 - FAD-dependent thymidylate synthase 2041 75.14 0 2301571..2302491 + 306 148273219 - CMM_2038 - putative nucleoside-diphosphate sugar epimerase 2042 74.89 0 2302512..2302961 - 149 148273220 - CMM_2039 - hypothetical protein 2043 72.78 0 2302961..2303794 - 277 148273221 dapB CMM_2040 - hypothetical protein 2044 69.98 0 2303854..2304456 - 200 148273222 gmpB CMM_2041 - hypothetical protein 2045 72.49 0 2304465..2305820 - 451 148273223 pepR CMM_2042 - M16 family metallopeptidase 2046 69.86 0 2305884..2306792 - 302 148273224 - CMM_2043 - hypothetical protein 2047 73.98 0 2307500..2308606 - 368 148273225 - CMM_2044 - putative oxidoreductase 2048 74.76 0 2309060..2309590 + 176 148273226 - CMM_2045 - hypothetical protein 2049 78.04 +1 2309613..2309999 + 128 148273227 - CMM_2046 - hypothetical protein 2050 69.70 0 2310069..2312342 - 757 148273228 pnpA CMM_2047 - polynucleotide phosphorylase/polyadenylase 2051 66.67 -1 2312820..2313089 - 89 148273229 rpsO CMM_2048 - 30S ribosomal protein S15 2052 72.20 0 2313325..2314626 + 433 148273230 - CMM_2049 - putative MFS permease 2053 76.23 0 2314653..2315384 + 243 148273231 - CMM_2050 - hypothetical protein 2054 73.46 0 2315628..2317202 - 524 148273232 - CMM_2051 - 2-oxoglutarate/malate translocator 2055 74.44 0 2317307..2319583 - 758 148273233 - CMM_2052 - putative ATP-dependent DNA helicase 2056 73.42 0 2319688..2320176 - 162 148273234 - CMM_2053 - hypothetical protein 2057 71.83 0 2320419..2321678 + 419 148273235 metE2 CMM_2054 - 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase 2058 76.70 0 2321683..2322210 - 175 148273236 aptA CMM_2055 - adenine phosphoribosyltransferase 2059 77.19 +1 2322317..2323048 + 243 148273237 - CMM_2056 - hypothetical protein 2060 71.34 0 2323130..2323963 - 277 148273238 - CMM_2057 - putative 2,5-diketo-D-gluconic acid reductase 2061 73.82 0 2323986..2324600 - 204 148273239 lspA CMM_2058 - putative lipoprotein signal peptidase 2062 76.89 +1 2324610..2325137 - 175 148273240 - CMM_2059 - hypothetical protein 2063 70.02 0 2325185..2325751 - 188 148273241 - CMM_2060 - cysteine peptidase family protein C56 2064 72.13 0 2325834..2326712 - 292 148273242 - CMM_2061 - hypothetical protein 2065 68.81 -1 2326956..2327516 + 186 148273243 dpsB CMM_2062 - putative DNA-binding ferritin-like protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0