version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1746 72.68 0 1968777..1969574 - 265 148272924 tpiA CMM_1742 - hypothetical protein 1747 72.35 0 1969571..1970785 - 404 148272925 pgk CMM_1743 - phosphoglycerate kinase 1748 67.96 -1 1970792..1971799 - 335 148272926 gapA CMM_1744 - glyceraldehyde 3-phosphate dehydrogenase 1749 65.07 -1 1971927..1972553 - 208 148272927 sodA CMM_1745 - hypothetical protein 1750 73.29 0 1972722..1973702 - 326 148272928 whiA CMM_1746 - hypothetical protein 1751 70.78 0 1973732..1974607 - 291 148272929 - CMM_1747 - hypothetical protein 1752 70.66 0 1974683..1976611 - 642 148272930 uvrC CMM_1748 - excinuclease ABC subunit C 1753 68.89 0 1976611..1979532 - 973 148272931 uvrA CMM_1749 - excinuclease ABC subunit A 1754 67.88 -1 1979615..1981681 - 688 148272932 uvrB CMM_1750 - excinuclease ABC subunit B 1755 75.28 0 1981691..1982305 - 204 148272933 coaE CMM_1751 - hypothetical protein 1756 66.80 -1 1982392..1983846 - 484 148272934 rpsA CMM_1752 - 30S ribosomal protein S1 1757 73.51 0 1984033..1985712 - 559 148272935 - CMM_1753 - hypothetical protein 1758 74.95 0 1985709..1986167 - 152 148272936 - CMM_1754 - PTS system, fructose-specific IIA/fpr component 1759 70.06 0 1986210..1988894 - 894 148272937 polA1 CMM_1755 - DNA polymerase I 1760 71.03 0 1988948..1989382 + 144 148272938 - CMM_1756 - putative thioesterase 1761 68.64 -1 1989422..1990030 - 202 148272939 - CMM_1757 - putative response regulator involved in antitermination 1762 69.78 0 1990294..1991739 - 481 148272940 pykA CMM_1758 - hypothetical protein 1763 72.29 0 1991826..1993283 - 485 148272941 gltD CMM_1759 - glutamate synthase subunit beta 1764 70.73 0 1993276..1997847 - 1523 148272942 gltB CMM_1760 - glutamate synthase (NADPH), alpha subunit 1765 70.19 0 1997955..1998977 - 340 148272943 - CMM_1761 - prolipoprotein diacylglyceryl transferase 1766 75.15 0 1999049..1999861 - 270 148272944 trpA CMM_1762 - tryptophan synthase subunit alpha 1767 71.03 0 1999858..2001072 - 404 148272945 trpB CMM_1763 - tryptophan synthase subunit beta 1768 73.87 0 2001069..2001845 - 258 148272946 trpC CMM_1764 - indole-3-glycerol-phosphate synthase 1769 67.49 -1 2001845..2002087 - 80 148272947 - CMM_1765 - hypothetical protein 1770 77.93 +1 2002192..2002830 - 212 148272948 - CMM_1766 - hypothetical protein 1771 73.53 0 2002830..2004389 - 519 148272949 trpE1 CMM_1767 - anthranilate synthase component I 1772 73.68 0 2004386..2004784 - 132 148272950 hisI CMM_1768 - phosphoribosyl-AMP cyclohydrolase 1773 74.12 0 2004781..2005572 - 263 148272951 hisF CMM_1769 - imidazole glycerol phosphate synthase subunit HisF 1774 72.02 0 2005575..2006414 - 279 148272952 hisG CMM_1770 - ATP phosphoribosyltransferase 1775 69.70 0 2006463..2006726 - 87 148272953 hisE CMM_1771 - phosphoribosyl-ATP pyrophosphatase 1776 72.63 0 2006826..2007194 - 122 148272954 - CMM_1772 - FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) 1777 72.05 0 2007229..2007897 - 222 148272955 rpeA CMM_1773 - ribulose-phosphate 3-epimerase 1778 77.60 +1 2007908..2009407 - 499 148272956 - CMM_1774 - putative rRNA cytosine-C5-methylases 1779 75.60 0 2009404..2010321 - 305 148272957 fmtA CMM_1775 - hypothetical protein 1780 78.06 +1 2010413..2012509 - 698 148272958 priA CMM_1776 - primosome assembly protein PriA 1781 71.78 0 2012552..2013763 - 403 148272959 metK CMM_1777 - S-adenosylmethionine synthetase 1782 75.21 0 2013803..2015020 - 405 148272960 dfpA CMM_1778 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1783 63.70 -2 2015099..2015368 - 89 148272961 rpoZ CMM_1779 - DNA-directed RNA polymerase subunit omega 1784 72.61 0 2015417..2016325 - 302 148272962 gmkA CMM_1780 - putative guanylate kinase putative guanylate kinase (GMP kinase)/integration host factor (IHF) fusion protein 1785 77.29 +1 2016322..2017215 - 297 148272963 pyrF CMM_1781 - putative orotidine 5'-phosphate decarboxylase 1786 70.13 0 2017212..2020502 - 1096 148272964 carB CMM_1782 - putative carbamoyl-phosphate synthase large subunit 1787 71.50 0 2020502..2021680 - 392 148272965 carA CMM_1783 - carbamoyl phosphate synthase small subunit 1788 74.43 0 2021677..2022204 - 175 148272966 - CMM_1784 - hypothetical protein 1789 74.66 0 2022201..2023613 - 470 148272967 pyrC CMM_1785 - dihydroorotase 1790 72.20 0 2023610..2024566 - 318 148272968 pyrB CMM_1786 - aspartate carbamoyltransferase catalytic subunit 1791 74.53 0 2024563..2025147 - 194 148272969 pyrR CMM_1787 - pyrimidine regulatory protein PyrR 1792 75.16 0 2025260..2027296 - 678 148272970 acsA2 CMM_1788 - acyl-coenzyme A synthetase 1793 76.16 0 2027371..2028234 - 287 148272971 - CMM_1789 - putative anion ABC transporter, permease component 1794 73.03 0 2028231..2029283 - 350 148272972 - CMM_1790 - putative anion ABC transporter, substrate-binding protein 1795 78.74 +1 2029356..2030225 - 289 148272973 - CMM_1791 - putative anion ABC transporter, ATP-binding protein 1796 70.53 0 2030333..2030746 - 137 148272974 nusB CMM_1792 - putative antitermination protein 1797 66.13 -1 2030750..2031313 - 187 148272975 efpA CMM_1793 - elongation factor P 1798 70.07 0 2031425..2031865 - 146 148272976 aroQ CMM_1794 - 3-dehydroquinate dehydratase 1799 76.08 0 2031898..2032683 - 261 148272977 - CMM_1795 - putative short-chain dehydrogenase/reductase 1800 72.13 0 2032680..2033813 - 377 148272978 aroB CMM_1796 - 3-dehydroquinate synthase 1801 75.81 0 2033810..2034301 - 163 148272979 aroK CMM_1797 - hypothetical protein 1802 75.30 0 2034304..2035542 - 412 148272980 aroC CMM_1798 - chorismate synthase 1803 78.11 +1 2035631..2036521 - 296 148272981 aroE CMM_1799 - hypothetical protein 1804 71.82 0 2036514..2037659 - 381 148272982 - CMM_1800 - hypothetical protein 1805 73.46 0 2038024..2038509 - 161 148272983 - CMM_1801 - putative Hollyday junction resolvase 1806 71.67 0 2038509..2041166 - 885 148272984 alaS CMM_1802 - alanyl-tRNA synthetase 1807 72.07 0 2041172..2041393 - 73 148272985 - CMM_1803 - hypothetical protein 1808 71.11 0 2041576..2042205 - 209 148272986 rpsD CMM_1804 - 30S ribosomal protein S4 1809 73.00 0 2042454..2043875 - 473 148272987 - CMM_1805 - recombination factor protein RarA 1810 72.42 0 2044467..2045699 + 410 148272988 - CMM_1807 - putative ATPase 1811 74.88 0 2045793..2046401 + 202 148272989 - CMM_1808 - hypothetical protein 1812 67.96 -1 2046388..2048637 - 749 148272990 relA CMM_1809 - GTP pyrophosphokinase 1813 74.17 0 2048776..2049135 - 119 148272991 - CMM_1810 - hypothetical protein 1814 68.74 -1 2049132..2050142 - 336 148272992 secF CMM_1811 - preprotein translocase subunit SecF 1815 71.42 0 2050142..2051950 - 602 148272993 secD CMM_1812 - preprotein translocase subunit SecD 1816 68.49 -1 2052077..2052460 - 127 148272994 - CMM_1813 - hypothetical protein 1817 73.33 0 2052537..2053616 - 359 148272995 ruvB CMM_1814 - Holliday junction DNA helicase B 1818 74.26 0 2053613..2054257 - 214 148272996 ruvA CMM_1815 - Holliday junction DNA helicase subunit 1819 76.35 0 2054274..2054882 - 202 148272997 ruvC CMM_1816 - Holliday junction resolvase 1820 67.45 -1 2054934..2055701 - 255 148272998 - CMM_1817 - hypothetical protein 1821 72.86 0 2055779..2056408 - 209 148272999 - CMM_1818 - glutamine amidotransferase subunit PdxT 1822 70.43 0 2056398..2057300 - 300 148273000 - CMM_1819 - pyridoxine biosynthesis protein 1823 68.88 0 2057314..2057856 - 180 148273001 - CMM_1820 - hypothetical protein 1824 69.73 0 2057901..2059955 - 684 148273002 thrS CMM_1821 - threonyl-tRNA synthetase 1825 71.88 0 2060771..2061730 - 319 148273003 - CMM_1822 - Cro/CI family transcriptional regulator 1826 69.90 0 2061839..2063599 + 586 148273004 glpD CMM_1823 - putative glycerol-3-phosphate dehydrogenase 1827 68.70 -1 2063716..2064207 + 163 148273005 - CMM_1824 - putative peroxidase 1828 73.26 0 2064253..2064768 - 171 148273006 - CMM_1825 - hypothetical protein 1829 75.06 0 2064860..2065276 + 138 148273007 - CMM_1826 - hypothetical protein 1830 77.14 +1 2065310..2066044 - 244 148273008 - CMM_1827 - putative PTS system hybrid protein 1831 76.76 +1 2066041..2066694 - 217 148273009 - CMM_1828 - putative dihydroxyacetone kinase 1832 73.95 0 2066698..2067699 - 333 148273010 - CMM_1829 - putative dihydroxyacetone kinase 1833 69.85 0 2067981..2068733 + 250 148273011 glpF CMM_1830 - MIP family glycerol uptake facilitator protein 1834 68.51 -1 2068763..2070280 + 505 148273012 glpK CMM_1831 - putative glycerol kinase 1835 75.00 0 2070370..2071101 - 243 148273013 - CMM_1832 - hypothetical protein 1836 74.15 0 2071163..2072218 - 351 148273014 trpD CMM_1833 - anthranilate phosphoribosyltransferase 1837 64.92 -1 2072307..2072936 + 209 148273015 ctaE CMM_1834 - putative cytochrome c oxidase subunit III 1838 69.54 0 2072963..2073763 + 266 148273016 qcrC CMM_1835 - putative ubiquinol-cytochrome c reductase cytochrome c subunit 1839 68.65 -1 2073809..2074918 + 369 148273017 qcrA CMM_1836 - putative menaquinol-cytochrome C reductase iron-sulfur subunit 1840 66.36 -1 2074902..2076533 + 543 148273018 qcrB CMM_1837 - putative menaquinol-cytochrome c reductase cytochrome B subunit 1841 74.73 0 2076648..2077565 + 305 148273019 - CMM_1838 - putative rRNA methylase involved in antibiotic resistance 1842 69.18 0 2079396..2079833 - 145 148273020 - CMM_1839 - putative acetyltransferase 1843 68.59 -1 2079838..2080254 - 138 148273021 - CMM_1840 - hypothetical protein 1844 65.01 -1 2080256..2082001 - 581 148273022 ctaD CMM_1841 - putative cytochrome c oxidase subunit I 1845 65.68 -1 2082014..2082925 - 303 148273023 ctaC CMM_1842 - putative cytochrome c oxidase subunit II 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0