version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1676 77.85 +1 1894205..1895071 + 288 148272854 - CMM_1672 - putative methyltransferase 1677 69.75 0 1895220..1896515 + 431 148272855 xysA CMM_1673 - endo-1,4-beta-xylanase A 1678 73.03 0 1896686..1898695 + 669 148272856 xysB CMM_1674 - endo-1,4-beta-xylanase A 1679 62.05 -2 1899661..1900137 - 158 148272857 - CMM_1675 - hypothetical protein 1680 72.60 0 1900245..1900733 + 162 148272858 - CMM_1676 - hypothetical protein 1681 74.83 0 1900871..1901752 + 293 148272859 - CMM_1677 - hypothetical protein 1682 70.91 0 1901811..1902281 - 156 148272860 - CMM_1678 - putative mutT-like protein 1683 74.38 0 1902278..1904365 - 695 148272861 - CMM_1679 - hypothetical protein 1684 71.92 0 1904405..1905184 - 259 148272862 - CMM_1680 - short chain dehydrogenase 1685 76.42 0 1905363..1905680 + 105 148272863 - CMM_1681 - hypothetical protein 1686 75.54 0 1905677..1906465 + 262 148272864 glpQ2 CMM_1682 - putative glycerophosphoryl diester phosphodiesterase 1687 72.68 0 1906526..1906891 + 121 148272865 - CMM_1683 - hypothetical protein 1688 73.54 0 1906979..1908520 - 513 148272866 - CMM_1684 - putative apolipoprotein N-acyltransferase 1689 72.01 0 1908562..1911033 - 823 148272867 - CMM_1685 - putative helicase 1690 66.53 -1 1911128..1911880 - 250 148272868 tatC CMM_1686 - Sec-independent twin-arginine protein translocase 1691 70.72 0 1911935..1912279 - 114 148272869 tatA CMM_1687 - sec-independent twin-arginine protein translocase protein 1692 74.44 0 1912477..1913466 - 329 148272870 - CMM_1688 - DeoR family transcriptional regulator 1693 73.31 0 1913463..1914470 - 335 148272871 - CMM_1689 - putative transcriptional regulator 1694 74.14 0 1914519..1915562 - 347 148272872 - CMM_1690 - putative peptidyl-prolyl cis-trans isomerase 1695 72.96 0 1915624..1916688 - 354 148272873 - CMM_1691 - putative methyltransferase 1696 73.99 0 1916685..1917380 - 231 148272874 - CMM_1692 - putative phosphatase 1697 72.29 0 1917473..1918432 + 319 148272875 - CMM_1693 - hypothetical protein 1698 75.72 0 1918448..1919728 - 426 148272876 cysS2 CMM_1694 - cysteinyl-tRNA synthetase 1699 69.96 0 1919733..1920551 - 272 148272877 bacA CMM_1695 - undecaprenol kinase 1700 71.01 0 1920594..1921904 - 436 148272878 - CMM_1696 - hypothetical protein 1701 70.30 0 1922243..1923259 + 338 148272879 corA1 CMM_1697 - Mg2+/Co2+ transporter 1702 73.60 0 1923304..1924269 + 321 148272880 - CMM_1698 - putative nucleoside-diphosphate-sugar epimerase 1703 79.49 +1 1924278..1925618 - 446 148272881 dnaJ3 CMM_1699 - curved DNA binding protein 1704 72.27 0 1925869..1926510 + 213 148272882 - CMM_1700 - glycine betaine/carnitine/choline ABC transporter, permease component 1705 73.33 0 1926503..1927792 + 429 148272883 - CMM_1701 - glycine betaine/carnitin ABC transporter ATP-binding protein 1706 72.92 0 1927789..1928556 + 255 148272884 - CMM_1702 - putative glycine/betaine/choline ABC transporter, permease 1707 71.23 0 1928559..1929566 + 335 148272885 - CMM_1703 - putative glycine/betaine ABC transporter,substrate-binding protein 1708 72.25 0 1929809..1931617 - 602 148272886 - CMM_1704 - putative DNA or RNA helicase 1709 77.25 +1 1931818..1933017 - 399 148272887 - CMM_1705 - putative acyl-CoA dehydrogenase 1710 73.24 0 1933069..1933920 - 283 148272888 - CMM_1706 - hypothetical protein 1711 74.75 0 1934046..1934837 + 263 148272889 - CMM_1707 - putative esterase 1712 74.49 0 1934853..1936067 - 404 148272890 pbpX CMM_1708 - D-alanyl-D-alanine carboxypeptidase 1713 74.81 0 1936064..1936873 - 269 148272891 - CMM_1709 - hypothetical protein 1714 73.33 0 1937030..1937884 + 284 148272892 - CMM_1710 - Sir2 family NAD-dependent protein deacetylase 1715 77.04 +1 1937881..1938516 + 211 148272893 - CMM_1711 - phosphoglycerate mutase 1716 74.52 0 1938570..1939664 - 364 148272894 - CMM_1712 - glycosyl transferase family protein 1717 74.92 0 1939661..1940557 - 298 148272895 - CMM_1713 - putative hydrolase 1718 66.96 -1 1940695..1942416 + 573 148272896 - CMM_1714 - putative trehalose synthase 1719 73.50 0 1942427..1943128 + 233 148272897 dnaQ CMM_1715 - DNA polymerase III subunit epsilon 1720 63.57 -2 1943205..1943462 - 85 148272898 rpmE CMM_1716 - 50S ribosomal protein L31 1721 72.83 0 1943594..1944388 - 264 148272899 modF CMM_1717 - putative molybdate ABC transporter ATP-binding subunit 1722 72.91 0 1944470..1945654 - 394 148272900 - CMM_1718 - putative glycosyl transferase 1723 67.71 -1 1945701..1946942 + 413 148272901 glgC CMM_1719 - glucose-1-phosphate adenylyltransferase 1724 75.25 0 1946939..1947637 + 232 148272902 serB2 CMM_1720 - hypothetical protein 1725 75.24 0 1947658..1948614 - 318 148272903 - CMM_1721 - putative proteinkinase or phosphotransferase 1726 71.73 0 1948638..1949348 - 236 148272904 - CMM_1722 - putative 3-oxoacyl-[acyl-carrier protein] reductase 1727 72.81 0 1949468..1949923 + 151 148272905 - CMM_1723 - hypothetical protein 1728 74.81 0 1949920..1950177 + 85 148272906 - CMM_1724 - hypothetical protein 1729 72.10 0 1950174..1951019 + 281 148272907 - CMM_1725 - hypothetical protein 1730 69.67 0 1951025..1952623 - 532 148272908 - CMM_1726 - putative ABC transporter ATP-binding protein 1731 66.96 -1 1952848..1953183 - 111 148272909 - CMM_1727 - hypothetical protein 1732 67.32 -1 1953180..1953950 - 256 148272910 - CMM_1728 - putative ABC transporter, ATP-binding protein 1733 69.16 0 1953964..1954284 - 106 148272911 - CMM_1729 - putative 2Fe-2S ferredoxin 1734 72.55 0 1954281..1955504 - 407 148272912 - CMM_1730 - hypothetical protein 1735 66.31 -1 1955505..1956923 - 472 148272913 - CMM_1731 - hypothetical protein 1736 71.91 0 1957190..1958200 + 336 148272914 ctaA CMM_1732 - membrane protein, putative cytochrome oxidase assembly protein 1737 68.62 -1 1958420..1959340 - 306 148272915 ctaB CMM_1733 - putative protoheme IX farnesyltransferase 1738 70.35 0 1959514..1961604 + 696 148272916 tktA CMM_1734 - transketolase 1739 68.55 -1 1961759..1962874 + 371 148272917 talA CMM_1735 - transaldolase 1740 73.87 0 1962871..1964466 + 531 148272918 pgiA CMM_1736 - hypothetical protein 1741 69.00 0 1964505..1966046 + 513 148272919 zwfA2 CMM_1737 - glucose-6-phosphate 1-dehydrogenase 1742 73.07 0 1966043..1967041 + 332 148272920 opcA CMM_1738 - putative glucose-6-P dehydrogenase effector 1743 71.60 0 1967038..1967808 + 256 148272921 pglA CMM_1739 - putative 6-phosphogluconolactonase 1744 70.73 0 1968002..1968370 - 122 148272922 - CMM_1740 - putative electron transport protein 1745 64.29 -2 1968382..1968633 - 83 148272923 secG CMM_1741 - preprotein translocase subunit SecG 1746 72.68 0 1968777..1969574 - 265 148272924 tpiA CMM_1742 - hypothetical protein 1747 72.35 0 1969571..1970785 - 404 148272925 pgk CMM_1743 - phosphoglycerate kinase 1748 67.96 -1 1970792..1971799 - 335 148272926 gapA CMM_1744 - glyceraldehyde 3-phosphate dehydrogenase 1749 65.07 -1 1971927..1972553 - 208 148272927 sodA CMM_1745 - hypothetical protein 1750 73.29 0 1972722..1973702 - 326 148272928 whiA CMM_1746 - hypothetical protein 1751 70.78 0 1973732..1974607 - 291 148272929 - CMM_1747 - hypothetical protein 1752 70.66 0 1974683..1976611 - 642 148272930 uvrC CMM_1748 - excinuclease ABC subunit C 1753 68.89 0 1976611..1979532 - 973 148272931 uvrA CMM_1749 - excinuclease ABC subunit A 1754 67.88 -1 1979615..1981681 - 688 148272932 uvrB CMM_1750 - excinuclease ABC subunit B 1755 75.28 0 1981691..1982305 - 204 148272933 coaE CMM_1751 - hypothetical protein 1756 66.80 -1 1982392..1983846 - 484 148272934 rpsA CMM_1752 - 30S ribosomal protein S1 1757 73.51 0 1984033..1985712 - 559 148272935 - CMM_1753 - hypothetical protein 1758 74.95 0 1985709..1986167 - 152 148272936 - CMM_1754 - PTS system, fructose-specific IIA/fpr component 1759 70.06 0 1986210..1988894 - 894 148272937 polA1 CMM_1755 - DNA polymerase I 1760 71.03 0 1988948..1989382 + 144 148272938 - CMM_1756 - putative thioesterase 1761 68.64 -1 1989422..1990030 - 202 148272939 - CMM_1757 - putative response regulator involved in antitermination 1762 69.78 0 1990294..1991739 - 481 148272940 pykA CMM_1758 - hypothetical protein 1763 72.29 0 1991826..1993283 - 485 148272941 gltD CMM_1759 - glutamate synthase subunit beta 1764 70.73 0 1993276..1997847 - 1523 148272942 gltB CMM_1760 - glutamate synthase (NADPH), alpha subunit 1765 70.19 0 1997955..1998977 - 340 148272943 - CMM_1761 - prolipoprotein diacylglyceryl transferase 1766 75.15 0 1999049..1999861 - 270 148272944 trpA CMM_1762 - tryptophan synthase subunit alpha 1767 71.03 0 1999858..2001072 - 404 148272945 trpB CMM_1763 - tryptophan synthase subunit beta 1768 73.87 0 2001069..2001845 - 258 148272946 trpC CMM_1764 - indole-3-glycerol-phosphate synthase 1769 67.49 -1 2001845..2002087 - 80 148272947 - CMM_1765 - hypothetical protein 1770 77.93 +1 2002192..2002830 - 212 148272948 - CMM_1766 - hypothetical protein 1771 73.53 0 2002830..2004389 - 519 148272949 trpE1 CMM_1767 - anthranilate synthase component I 1772 73.68 0 2004386..2004784 - 132 148272950 hisI CMM_1768 - phosphoribosyl-AMP cyclohydrolase 1773 74.12 0 2004781..2005572 - 263 148272951 hisF CMM_1769 - imidazole glycerol phosphate synthase subunit HisF 1774 72.02 0 2005575..2006414 - 279 148272952 hisG CMM_1770 - ATP phosphoribosyltransferase 1775 69.70 0 2006463..2006726 - 87 148272953 hisE CMM_1771 - phosphoribosyl-ATP pyrophosphatase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0