version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1610 73.21 0 1819939..1820442 + 167 148272788 wcmM CMM_1607 - putative serine acetyltransferase 1611 73.54 0 1820477..1821901 + 474 148272789 wzx1 CMM_1608 - putative membrane protein involved in the export of EPS 1612 69.73 0 1821917..1823482 - 521 148272790 wcmN CMM_1609 - putative undecaprenyl-phosphate glycosyl-1-phosphate transfe 1613 76.04 0 1823628..1823915 - 95 148272791 - CMM_1610 - hypothetical protein 1614 61.76 -2 1824033..1824236 - 67 148272792 cspA1 CMM_1611 - putative cold shock protein 1615 77.26 +1 1824495..1826165 + 556 148272793 polA2 CMM_1612 - putative DNA polymerase I 1616 70.00 0 1826256..1826405 + 49 148272794 - CMM_1612A - hypothetical protein 1617 71.13 0 1826513..1827364 + 283 148272795 - CMM_1613 - hypothetical protein 1618 75.12 0 1827366..1827968 - 200 148272796 - CMM_1614 - PadR family transcriptional regulator 1619 70.52 0 1828232..1828750 + 172 148272797 - CMM_1615 - hypothetical protein 1620 72.22 0 1828844..1830085 - 413 148272798 fabF CMM_1616 - 3-oxoacyl-[acyl-carrier-protein] synthase 1621 60.24 -2 1830165..1830413 - 82 148272799 acpP CMM_1617 - acyl carrier protein 1622 71.20 0 1830467..1831480 - 337 148272800 fabH CMM_1618 - 3-oxoacyl-(acyl carrier protein) synthase III 1623 74.81 0 1831511..1832431 - 306 148272801 fabD CMM_1619 - putative malonyl CoA-acyl carrier protein transacylase 1624 73.80 0 1832526..1833800 - 424 148272802 - CMM_1620 - putative transcriptional regulator 1625 68.76 -1 1833817..1836543 - 908 148272803 aceE CMM_1621 - pyruvate dehydrogenase subunit E1 1626 69.20 0 1836784..1837257 + 157 148272804 ahpE CMM_1622 - putative thiol-specific antioxidant protein 1627 73.48 0 1837286..1837975 - 229 148272805 - CMM_1623 - hypothetical protein 1628 75.97 0 1838182..1838772 - 196 148272806 - CMM_1624 - TetR family transcriptional regulator 1629 77.57 +1 1838853..1839494 + 213 148272807 - CMM_1625 - membrane protein BioY family 1630 74.24 0 1839509..1840195 + 228 148272808 - CMM_1626 - putative metal ABC transporter, ATP-binding protein 1631 75.82 0 1840192..1840803 + 203 148272809 - CMM_1627 - putative metal ABC transporter, permease component 1632 79.69 +1 1840889..1841080 + 63 148272810 - CMM_1628 - hypothetical protein 1633 76.09 0 1841133..1841960 + 275 148272811 - CMM_1629 - hypothetical protein 1634 72.24 0 1842052..1842786 + 244 148272812 - CMM_1630 - hypothetical protein 1635 71.17 0 1843281..1844102 - 273 148272813 ppgK1 CMM_1631 - putative polyphosphate glucokinase 1636 72.68 0 1844177..1844359 + 60 148272814 - CMM_1632 - hypothetical protein 1637 72.64 0 1844369..1845238 - 289 148272815 panB CMM_1633 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1638 68.39 -1 1845324..1846661 + 445 148272816 glnA2 CMM_1634 - putative glutamine synthetase II 1639 74.41 0 1846720..1849740 + 1006 148272817 glnE CMM_1635 - putative glutamate-ammonia-ligase adenylyltransferase 1640 65.68 -1 1849834..1851258 - 474 148272818 glnA1 CMM_1636 - glutamine synthetase I 1641 74.36 0 1851451..1851879 + 142 148272819 - CMM_1637 - hypothetical protein 1642 76.45 0 1851905..1852630 - 241 148272820 - CMM_1638 - putative chaperone 1643 69.06 0 1852685..1853395 - 236 148272821 - CMM_1639 - hypothetical protein 1644 74.01 0 1853609..1855297 + 562 148272822 pknD CMM_1640 - putative serine/threonine protein kinase 1645 71.79 0 1855324..1856766 - 480 148272823 aceF CMM_1641 - putative pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component 1646 69.00 0 1856827..1858200 - 457 148272824 lpdB CMM_1642 - dihydrolipoamide dehydrogenase 1647 73.62 0 1858292..1859800 - 502 148272825 pepA CMM_1643 - leucine aminopeptidase 1648 70.79 0 1859970..1860890 + 306 148272826 - CMM_1644 - hypothetical protein 1649 72.71 0 1860965..1862287 + 440 148272827 - CMM_1645 - putative MFS permease 1650 71.33 0 1862537..1864015 + 492 148272828 sigA CMM_1646 - RNA polymerase sigma factor 1651 73.69 0 1864019..1865299 + 426 148272829 murX CMM_1647 - putative UDP-N-acetylmuramyl tripeptide synthase 1652 76.05 0 1865296..1866030 + 244 148272830 - CMM_1648 - putative glutamine amidotransferase 1653 67.11 -1 1866133..1866360 - 75 148272831 - CMM_1649 - hypothetical protein 1654 69.84 0 1866573..1868651 + 692 148272832 - CMM_1650 - DNA topoisomerase IV subunit B 1655 72.16 0 1868733..1871279 - 848 148272833 - CMM_1651 - DNA topoisomerase IV subunit A 1656 75.18 0 1871364..1872503 + 379 148272834 - CMM_1652 - hypothetical protein 1657 74.56 0 1872559..1873749 - 396 148272835 - CMM_1653 - hypothetical protein 1658 67.35 -1 1874075..1874368 + 97 148272836 - CMM_1654 - hypothetical protein 1659 73.11 0 1874416..1874865 - 149 148272837 - CMM_1655 - hypothetical protein 1660 75.16 0 1874904..1875374 + 156 148272838 dutA CMM_1656 - hypothetical protein 1661 75.04 0 1875371..1876063 + 230 148272839 - CMM_1657 - hypothetical protein 1662 75.38 0 1876066..1876857 + 263 148272840 - CMM_1658 - hypothetical protein 1663 69.05 0 1877093..1879906 + 937 148272841 acnA CMM_1659 - aconitate hydratase 1664 71.44 0 1879985..1881973 + 662 148272842 dxsA CMM_1660 - 1-deoxy-D-xylulose-5-phosphate synthase 1665 71.17 0 1882035..1884164 - 709 148272843 fadB CMM_1661 - enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase 1666 71.79 0 1884161..1885369 - 402 148272844 fadA CMM_1662 - putative 3-oxoacyl-CoA thiolase 1667 76.66 0 1885441..1886931 - 496 148272845 - CMM_1663 - putative ribonuclease D 1668 72.53 0 1886928..1887524 - 198 148272846 - CMM_1664 - hypothetical protein 1669 76.17 0 1887619..1888365 - 248 148272847 - CMM_1665 - putative pyrimidine reductase 1670 73.70 0 1888362..1888802 - 146 148272848 - CMM_1666 - hypothetical protein 1671 71.60 0 1888799..1889710 - 303 148272849 sseA CMM_1667 - thiosulfate sulfurtransferase 1672 71.83 0 1889879..1890943 + 354 148272850 - CMM_1668 - putative ATPase 1673 69.23 0 1891196..1892482 + 428 148272851 amtB CMM_1669 - ammonium transporter 1674 69.52 0 1892731..1893570 + 279 148272852 - CMM_1670 - oxidoreductase 1675 74.31 0 1893777..1894208 + 143 148272853 - CMM_1671 - hypothetical protein 1676 77.85 +1 1894205..1895071 + 288 148272854 - CMM_1672 - putative methyltransferase 1677 69.75 0 1895220..1896515 + 431 148272855 xysA CMM_1673 - endo-1,4-beta-xylanase A 1678 73.03 0 1896686..1898695 + 669 148272856 xysB CMM_1674 - endo-1,4-beta-xylanase A 1679 62.05 -2 1899661..1900137 - 158 148272857 - CMM_1675 - hypothetical protein 1680 72.60 0 1900245..1900733 + 162 148272858 - CMM_1676 - hypothetical protein 1681 74.83 0 1900871..1901752 + 293 148272859 - CMM_1677 - hypothetical protein 1682 70.91 0 1901811..1902281 - 156 148272860 - CMM_1678 - putative mutT-like protein 1683 74.38 0 1902278..1904365 - 695 148272861 - CMM_1679 - hypothetical protein 1684 71.92 0 1904405..1905184 - 259 148272862 - CMM_1680 - short chain dehydrogenase 1685 76.42 0 1905363..1905680 + 105 148272863 - CMM_1681 - hypothetical protein 1686 75.54 0 1905677..1906465 + 262 148272864 glpQ2 CMM_1682 - putative glycerophosphoryl diester phosphodiesterase 1687 72.68 0 1906526..1906891 + 121 148272865 - CMM_1683 - hypothetical protein 1688 73.54 0 1906979..1908520 - 513 148272866 - CMM_1684 - putative apolipoprotein N-acyltransferase 1689 72.01 0 1908562..1911033 - 823 148272867 - CMM_1685 - putative helicase 1690 66.53 -1 1911128..1911880 - 250 148272868 tatC CMM_1686 - Sec-independent twin-arginine protein translocase 1691 70.72 0 1911935..1912279 - 114 148272869 tatA CMM_1687 - sec-independent twin-arginine protein translocase protein 1692 74.44 0 1912477..1913466 - 329 148272870 - CMM_1688 - DeoR family transcriptional regulator 1693 73.31 0 1913463..1914470 - 335 148272871 - CMM_1689 - putative transcriptional regulator 1694 74.14 0 1914519..1915562 - 347 148272872 - CMM_1690 - putative peptidyl-prolyl cis-trans isomerase 1695 72.96 0 1915624..1916688 - 354 148272873 - CMM_1691 - putative methyltransferase 1696 73.99 0 1916685..1917380 - 231 148272874 - CMM_1692 - putative phosphatase 1697 72.29 0 1917473..1918432 + 319 148272875 - CMM_1693 - hypothetical protein 1698 75.72 0 1918448..1919728 - 426 148272876 cysS2 CMM_1694 - cysteinyl-tRNA synthetase 1699 69.96 0 1919733..1920551 - 272 148272877 bacA CMM_1695 - undecaprenol kinase 1700 71.01 0 1920594..1921904 - 436 148272878 - CMM_1696 - hypothetical protein 1701 70.30 0 1922243..1923259 + 338 148272879 corA1 CMM_1697 - Mg2+/Co2+ transporter 1702 73.60 0 1923304..1924269 + 321 148272880 - CMM_1698 - putative nucleoside-diphosphate-sugar epimerase 1703 79.49 +1 1924278..1925618 - 446 148272881 dnaJ3 CMM_1699 - curved DNA binding protein 1704 72.27 0 1925869..1926510 + 213 148272882 - CMM_1700 - glycine betaine/carnitine/choline ABC transporter, permease component 1705 73.33 0 1926503..1927792 + 429 148272883 - CMM_1701 - glycine betaine/carnitin ABC transporter ATP-binding protein 1706 72.92 0 1927789..1928556 + 255 148272884 - CMM_1702 - putative glycine/betaine/choline ABC transporter, permease 1707 71.23 0 1928559..1929566 + 335 148272885 - CMM_1703 - putative glycine/betaine ABC transporter,substrate-binding protein 1708 72.25 0 1929809..1931617 - 602 148272886 - CMM_1704 - putative DNA or RNA helicase 1709 77.25 +1 1931818..1933017 - 399 148272887 - CMM_1705 - putative acyl-CoA dehydrogenase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0