version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1541 75.58 0 1740283..1740753 - 156 148272719 - CMM_1538 - putative acetyltransferase 1542 73.22 0 1740805..1741338 + 177 148272720 - CMM_1539 - putative N-acetyltransferase 1543 77.03 +1 1741632..1742075 - 147 148272721 - CMM_1540 - hypothetical protein 1544 67.59 -1 1742453..1743865 + 470 148272722 cydA CMM_1541 - cytochrome bd-type menaquinol oxidase subunit I 1545 68.96 0 1743865..1744869 + 334 148272723 cydB CMM_1542 - cytochrome bd-type menaquinol oxidase subunit II 1546 77.85 +1 1744877..1746637 + 586 148272724 cydD CMM_1543 - ABC transporter, ATP-binding protein involved in cytochrome bd biosynthesis 1547 77.52 +1 1746634..1748301 + 555 148272725 cydC CMM_1544 - transport ATP-binding protein CydC 1548 78.14 +1 1748332..1749150 - 272 148272726 - CMM_1545 - hypothetical protein 1549 77.05 +1 1749204..1750667 + 487 148272727 trpE2 CMM_1546 - putative anthranilate synthase component I 1550 70.34 0 1750767..1753322 + 851 148272728 leuS CMM_1547 - leucyl-tRNA synthetase 1551 79.17 +1 1753719..1754390 + 223 148272729 - CMM_1548 - putative protein involved in DNA uptake 1552 79.18 +1 1754387..1756144 + 585 148272730 - CMM_1549 - membrane protein, putatively involved in DNA uptake 1553 72.98 0 1756230..1757258 + 342 148272731 holA CMM_1550 - DNA polymerase III, delta subunit 1554 63.64 -2 1757361..1757624 - 87 148272732 rpsT CMM_1551 - 30S ribosomal protein S20 1555 75.53 0 1757760..1758278 - 172 148272733 - CMM_1552 - putative NUDIX hydrolase 1556 73.10 0 1758372..1759631 + 419 148272734 - CMM_1553 - putative amidohydrolase 1557 75.26 0 1759628..1760605 + 325 148272735 - CMM_1554 - NDP sugar epimerase, putative cell-division inhibitor 1558 68.61 -1 1760718..1762565 + 615 148272736 lepA CMM_1555 - GTP-binding protein LepA 1559 73.49 0 1762575..1763351 - 258 148272737 - CMM_1556 - putative secreted protein 1560 73.21 0 1763578..1764357 - 259 148272738 - CMM_1557 - putative secreted protein 1561 73.36 0 1764671..1765447 - 258 148272739 - CMM_1558 - putative secreted protein 1562 73.09 0 1765744..1766397 + 217 148272740 - CMM_1559 - hypothetical protein 1563 74.07 0 1766420..1767121 - 233 148272741 - CMM_1560 - putative phosphatase 1564 75.41 0 1767201..1768424 + 407 148272742 hemN CMM_1561 - coproporphyrinogen III oxidase 1565 74.15 0 1768440..1768853 - 137 148272743 - CMM_1562 - hypothetical protein 1566 66.92 -1 1768864..1769259 - 131 148272744 - CMM_1563 - hypothetical protein 1567 72.24 0 1769447..1770469 + 340 148272745 hrcA CMM_1564 - heat-inducible transcription repressor 1568 71.24 0 1770530..1771645 + 371 148272746 dnaJ2 CMM_1565 - chaperone 1569 76.81 +1 1771648..1772406 + 252 148272747 - CMM_1566 - hypothetical protein 1570 72.27 0 1772435..1772791 + 118 148272748 - CMM_1567 - HIT family hydrolase 1571 70.10 0 1772778..1773827 + 349 148272749 - CMM_1568 - putative phosphate starvation-induced ATPase 1572 69.26 0 1773824..1774285 + 153 148272750 - CMM_1569 - putative metalloprotease 1573 72.49 0 1774294..1775616 + 440 148272751 - CMM_1570 - hypothetical protein 1574 72.27 0 1775609..1776661 + 350 148272752 era CMM_1571 - GTP-binding protein Era 1575 76.46 0 1776773..1778284 + 503 148272753 - CMM_1572 - putative two-component system, sensor kinase 1576 73.07 0 1778338..1779024 + 228 148272754 - CMM_1573 - putative two-component system, response regulator 1577 74.57 0 1779110..1780513 + 467 148272755 - CMM_1574 - putative membrane bound esterase 1578 73.57 0 1780510..1783086 + 858 148272756 - CMM_1575 - hypothetical protein 1579 69.67 0 1783252..1785018 + 588 148272757 leuA CMM_1576 - 2-isopropylmalate synthase 1580 73.60 0 1785110..1785787 - 225 148272758 - CMM_1577 - hypothetical protein 1581 74.95 0 1785906..1786835 + 309 148272759 recO CMM_1578 - DNA repair protein /recombination protein 1582 72.43 0 1786832..1787698 + 288 148272760 uppS1 CMM_1579 - putative undecaprenyl pyrophosphate synthetase 1583 74.95 0 1787708..1788817 + 369 148272761 - CMM_1580 - putative oxidoreductase 1584 69.26 0 1788928..1790313 + 461 148272762 glyS CMM_1581 - glycyl-tRNA synthetase 1585 74.84 0 1790365..1790829 - 154 148272763 - CMM_1582 - hypothetical protein 1586 72.45 0 1790950..1791675 + 241 148272764 - CMM_1583 - hypothetical protein 1587 73.56 0 1791958..1793190 + 410 148272765 dusA CMM_1584 - putative tRNA-dihydrouridine synthase 1588 72.86 0 1793195..1794454 + 419 148272766 dgtA CMM_1585 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 1589 72.91 0 1794549..1796438 + 629 148272767 dnaG CMM_1586 - DNA primase 1590 69.02 0 1796639..1798294 + 551 148272768 - CMM_1587 - putative oligopeptide ABC transporter, substrate-binding protein 1591 70.14 0 1798439..1799533 + 364 148272769 - CMM_1588 - putative oligopeptide ABC transporter, permease component 1592 70.67 0 1799535..1800557 + 340 148272770 - CMM_1589 - putative oligopeptide ABC transporter, permease component 1593 73.96 0 1800554..1802266 + 570 148272771 - CMM_1590 - putative oligopeptide ABC transporter, ATP-binding protein 1594 77.11 +1 1802380..1803327 + 315 148272772 - CMM_1591 - putative oligopeptide ABC transporter, ATP-binding protein 1595 74.61 0 1803438..1804343 + 301 148272773 - CMM_1592 - putative 2-hydroxyacid dehydrogenase 1596 76.79 +1 1804431..1805438 + 335 148272774 - CMM_1593 - hypothetical protein 1597 75.07 0 1805458..1805826 - 122 148272775 - CMM_1594 - hypothetical protein 1598 73.19 0 1806057..1806623 - 188 148272776 defA CMM_1595 - putative polypeptide deformylase 1599 71.71 0 1806663..1807574 + 303 148272777 wcmE CMM_1596 - exporter DMT family membrane protein 1600 71.11 0 1807755..1809014 + 419 148272778 wcmF CMM_1597 - putative glycosyltransferase 1601 72.64 0 1809356..1811548 + 730 148272779 wcmG CMM_1598 - putative membrane-bound acyltranferase 1602 71.34 0 1811648..1812652 - 334 148272780 fclA CMM_1599 - hypothetical protein 1603 68.85 0 1812649..1813701 - 350 148272781 gmdA CMM_1600 - putative GDP-mannose 4,6-dehydratase 1604 73.12 0 1813877..1815163 + 428 148272782 wcmH CMM_1601 - putative glycosyltransferase 1605 73.16 0 1815160..1815744 + 194 148272783 wcmI CMM_1602 - putative acetyltransferase involved in polysaccharide biosynthesis 1606 71.37 0 1815849..1816784 + 311 148272784 wcmJ CMM_1603 - putative pyruvyltransferase 1607 76.48 0 1816781..1818013 + 410 148272785 wcmK CMM_1604 - glycosyl transferase 1608 70.02 0 1818010..1819293 + 427 148272786 wzy1 CMM_1605 - putative colanic acid biosynthesis protein 1609 72.53 0 1819193..1819942 + 249 148272787 - CMM_1606 - glycosyl transferase 1610 73.21 0 1819939..1820442 + 167 148272788 wcmM CMM_1607 - putative serine acetyltransferase 1611 73.54 0 1820477..1821901 + 474 148272789 wzx1 CMM_1608 - putative membrane protein involved in the export of EPS 1612 69.73 0 1821917..1823482 - 521 148272790 wcmN CMM_1609 - putative undecaprenyl-phosphate glycosyl-1-phosphate transfe 1613 76.04 0 1823628..1823915 - 95 148272791 - CMM_1610 - hypothetical protein 1614 61.76 -2 1824033..1824236 - 67 148272792 cspA1 CMM_1611 - putative cold shock protein 1615 77.26 +1 1824495..1826165 + 556 148272793 polA2 CMM_1612 - putative DNA polymerase I 1616 70.00 0 1826256..1826405 + 49 148272794 - CMM_1612A - hypothetical protein 1617 71.13 0 1826513..1827364 + 283 148272795 - CMM_1613 - hypothetical protein 1618 75.12 0 1827366..1827968 - 200 148272796 - CMM_1614 - PadR family transcriptional regulator 1619 70.52 0 1828232..1828750 + 172 148272797 - CMM_1615 - hypothetical protein 1620 72.22 0 1828844..1830085 - 413 148272798 fabF CMM_1616 - 3-oxoacyl-[acyl-carrier-protein] synthase 1621 60.24 -2 1830165..1830413 - 82 148272799 acpP CMM_1617 - acyl carrier protein 1622 71.20 0 1830467..1831480 - 337 148272800 fabH CMM_1618 - 3-oxoacyl-(acyl carrier protein) synthase III 1623 74.81 0 1831511..1832431 - 306 148272801 fabD CMM_1619 - putative malonyl CoA-acyl carrier protein transacylase 1624 73.80 0 1832526..1833800 - 424 148272802 - CMM_1620 - putative transcriptional regulator 1625 68.76 -1 1833817..1836543 - 908 148272803 aceE CMM_1621 - pyruvate dehydrogenase subunit E1 1626 69.20 0 1836784..1837257 + 157 148272804 ahpE CMM_1622 - putative thiol-specific antioxidant protein 1627 73.48 0 1837286..1837975 - 229 148272805 - CMM_1623 - hypothetical protein 1628 75.97 0 1838182..1838772 - 196 148272806 - CMM_1624 - TetR family transcriptional regulator 1629 77.57 +1 1838853..1839494 + 213 148272807 - CMM_1625 - membrane protein BioY family 1630 74.24 0 1839509..1840195 + 228 148272808 - CMM_1626 - putative metal ABC transporter, ATP-binding protein 1631 75.82 0 1840192..1840803 + 203 148272809 - CMM_1627 - putative metal ABC transporter, permease component 1632 79.69 +1 1840889..1841080 + 63 148272810 - CMM_1628 - hypothetical protein 1633 76.09 0 1841133..1841960 + 275 148272811 - CMM_1629 - hypothetical protein 1634 72.24 0 1842052..1842786 + 244 148272812 - CMM_1630 - hypothetical protein 1635 71.17 0 1843281..1844102 - 273 148272813 ppgK1 CMM_1631 - putative polyphosphate glucokinase 1636 72.68 0 1844177..1844359 + 60 148272814 - CMM_1632 - hypothetical protein 1637 72.64 0 1844369..1845238 - 289 148272815 panB CMM_1633 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1638 68.39 -1 1845324..1846661 + 445 148272816 glnA2 CMM_1634 - putative glutamine synthetase II 1639 74.41 0 1846720..1849740 + 1006 148272817 glnE CMM_1635 - putative glutamate-ammonia-ligase adenylyltransferase 1640 65.68 -1 1849834..1851258 - 474 148272818 glnA1 CMM_1636 - glutamine synthetase I 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0