version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1501 73.63 0 1697691..1698695 - 334 148272679 - CMM_1499 - hypothetical protein 1502 72.22 0 1698747..1699070 + 107 148272680 - CMM_1500 - hypothetical protein 1503 78.51 +1 1699112..1700116 + 334 148272681 - CMM_1501 - putative esterase 1504 75.79 0 1700253..1701041 + 262 148272682 - CMM_1502 - DeoR family transcriptional regulator 1505 76.75 +1 1701038..1702009 + 323 148272683 fruK CMM_1503 - putative 1-phosphofructokinase 1506 73.52 0 1702032..1704089 + 685 148272684 fruA CMM_1504 - phosphoenolpyruvate-dependent fructose phosphotransferase system, EIIA, EIIB, EIIC 1507 73.26 0 1704145..1704417 + 90 148272685 fruB CMM_1505 - phosphotransferase system, phosphocarrier protein HPr 1508 73.97 0 1704492..1706039 - 515 148272686 - CMM_1506 - putative short-chain dehydrogenase/oxidoreductase 1509 77.17 +1 1706121..1706396 - 91 148272687 - CMM_1506A - hypothetical protein 1510 71.07 0 1706484..1709024 + 846 148272688 - CMM_1507 - putative ATP-dependent helicase 1511 77.74 +1 1709021..1709950 + 309 148272689 - CMM_1508 - putative short chain dehydrogenase/oxidoreductase 1512 73.19 0 1709966..1711084 - 372 148272690 hisC1 CMM_1509 - histidinol-phosphate aminotransferase 1513 75.28 0 1711169..1712074 + 301 148272691 - CMM_1510 - putative hydrolase 1514 73.88 0 1712142..1712876 + 244 148272692 - CMM_1511 - putative hydrolase/acyltransferase 1515 75.31 0 1712908..1714353 + 481 148272693 - CMM_1512 - putative efflux MFS permease 1516 76.18 0 1714350..1715327 - 325 148272694 - CMM_1513 - putative Zn-dependant oxidoreductase 1517 66.84 -1 1715482..1716048 + 188 148272695 - CMM_1514 - hypothetical protein 1518 76.25 0 1716185..1717144 - 319 148272696 - CMM_1515 - putative hydrolase/acyltransferase 1519 75.56 0 1717308..1718240 - 310 148272697 - CMM_1516 - putative hydrolase/acyltransferase 1520 73.45 0 1718237..1719283 - 348 148272698 - CMM_1517 - hypothetical protein 1521 73.09 0 1719355..1722777 - 1140 148272699 dnaE1 CMM_1518 - DNA polymerase III, alpha chain 1522 71.64 0 1722892..1724259 + 455 148272700 zwfA1 CMM_1519 - glucose-6-phosphate 1-dehydrogenase 1523 76.75 +1 1724367..1725110 + 247 148272701 - CMM_1520 - putative carboxymethylenebutenolidase 1524 72.25 0 1725174..1726481 + 435 148272702 - CMM_1521 - LytR family transcriptional regulator 1525 76.44 0 1726516..1727436 - 306 148272703 - CMM_1522 - LysR family transcriptional regulator 1526 75.38 0 1727505..1728032 + 175 148272704 - CMM_1523 - putative acetyltransferase 1527 71.24 0 1728051..1728749 - 232 148272705 - CMM_1524 - nicotinamide mononucleotide transporter 1528 74.69 0 1728886..1729209 - 107 148272706 - CMM_1525 - hypothetical protein 1529 72.53 0 1729463..1730332 + 289 148272707 - CMM_1526 - putative oxidoreductase 1530 72.19 0 1730403..1731542 - 379 148272708 - CMM_1527 - hypothetical protein 1531 77.05 +1 1731539..1732270 - 243 148272709 - CMM_1528 - hypothetical protein 1532 71.08 0 1732461..1733366 + 301 148272710 proV CMM_1529 - putative proline/glycine/betaine/choline ABC transporter, ATP-binding protein 1533 69.94 0 1733363..1734064 + 233 148272711 proW CMM_1530 - putative proline/glycine/betaine/choline ABC transporter, permease component 1534 71.49 0 1734061..1734786 + 241 148272712 proZ CMM_1531 - putative proline/glycine/betaine/choline ABC transporter, permease component 1535 69.03 0 1734800..1735729 + 309 148272713 proX CMM_1532 - putative proline/glycine/betaine/choline ABC transporter, substrate-binding protein 1536 75.76 0 1735828..1736322 + 164 148272714 - CMM_1533 - hypothetical protein 1537 74.37 0 1736319..1737539 + 406 148272715 chsA CMM_1534 - putative chalcone synthase/polyketide synthase III 1538 76.76 +1 1737539..1738261 + 240 148272716 - CMM_1535 - hypothetical protein 1539 78.00 +1 1738258..1739448 + 396 148272717 - CMM_1536 - putative monooxygenase 1540 76.36 0 1739441..1740286 - 281 148272718 - CMM_1537 - putative polyprenyltransferase 1541 75.58 0 1740283..1740753 - 156 148272719 - CMM_1538 - putative acetyltransferase 1542 73.22 0 1740805..1741338 + 177 148272720 - CMM_1539 - putative N-acetyltransferase 1543 77.03 +1 1741632..1742075 - 147 148272721 - CMM_1540 - hypothetical protein 1544 67.59 -1 1742453..1743865 + 470 148272722 cydA CMM_1541 - cytochrome bd-type menaquinol oxidase subunit I 1545 68.96 0 1743865..1744869 + 334 148272723 cydB CMM_1542 - cytochrome bd-type menaquinol oxidase subunit II 1546 77.85 +1 1744877..1746637 + 586 148272724 cydD CMM_1543 - ABC transporter, ATP-binding protein involved in cytochrome bd biosynthesis 1547 77.52 +1 1746634..1748301 + 555 148272725 cydC CMM_1544 - transport ATP-binding protein CydC 1548 78.14 +1 1748332..1749150 - 272 148272726 - CMM_1545 - hypothetical protein 1549 77.05 +1 1749204..1750667 + 487 148272727 trpE2 CMM_1546 - putative anthranilate synthase component I 1550 70.34 0 1750767..1753322 + 851 148272728 leuS CMM_1547 - leucyl-tRNA synthetase 1551 79.17 +1 1753719..1754390 + 223 148272729 - CMM_1548 - putative protein involved in DNA uptake 1552 79.18 +1 1754387..1756144 + 585 148272730 - CMM_1549 - membrane protein, putatively involved in DNA uptake 1553 72.98 0 1756230..1757258 + 342 148272731 holA CMM_1550 - DNA polymerase III, delta subunit 1554 63.64 -2 1757361..1757624 - 87 148272732 rpsT CMM_1551 - 30S ribosomal protein S20 1555 75.53 0 1757760..1758278 - 172 148272733 - CMM_1552 - putative NUDIX hydrolase 1556 73.10 0 1758372..1759631 + 419 148272734 - CMM_1553 - putative amidohydrolase 1557 75.26 0 1759628..1760605 + 325 148272735 - CMM_1554 - NDP sugar epimerase, putative cell-division inhibitor 1558 68.61 -1 1760718..1762565 + 615 148272736 lepA CMM_1555 - GTP-binding protein LepA 1559 73.49 0 1762575..1763351 - 258 148272737 - CMM_1556 - putative secreted protein 1560 73.21 0 1763578..1764357 - 259 148272738 - CMM_1557 - putative secreted protein 1561 73.36 0 1764671..1765447 - 258 148272739 - CMM_1558 - putative secreted protein 1562 73.09 0 1765744..1766397 + 217 148272740 - CMM_1559 - hypothetical protein 1563 74.07 0 1766420..1767121 - 233 148272741 - CMM_1560 - putative phosphatase 1564 75.41 0 1767201..1768424 + 407 148272742 hemN CMM_1561 - coproporphyrinogen III oxidase 1565 74.15 0 1768440..1768853 - 137 148272743 - CMM_1562 - hypothetical protein 1566 66.92 -1 1768864..1769259 - 131 148272744 - CMM_1563 - hypothetical protein 1567 72.24 0 1769447..1770469 + 340 148272745 hrcA CMM_1564 - heat-inducible transcription repressor 1568 71.24 0 1770530..1771645 + 371 148272746 dnaJ2 CMM_1565 - chaperone 1569 76.81 +1 1771648..1772406 + 252 148272747 - CMM_1566 - hypothetical protein 1570 72.27 0 1772435..1772791 + 118 148272748 - CMM_1567 - HIT family hydrolase 1571 70.10 0 1772778..1773827 + 349 148272749 - CMM_1568 - putative phosphate starvation-induced ATPase 1572 69.26 0 1773824..1774285 + 153 148272750 - CMM_1569 - putative metalloprotease 1573 72.49 0 1774294..1775616 + 440 148272751 - CMM_1570 - hypothetical protein 1574 72.27 0 1775609..1776661 + 350 148272752 era CMM_1571 - GTP-binding protein Era 1575 76.46 0 1776773..1778284 + 503 148272753 - CMM_1572 - putative two-component system, sensor kinase 1576 73.07 0 1778338..1779024 + 228 148272754 - CMM_1573 - putative two-component system, response regulator 1577 74.57 0 1779110..1780513 + 467 148272755 - CMM_1574 - putative membrane bound esterase 1578 73.57 0 1780510..1783086 + 858 148272756 - CMM_1575 - hypothetical protein 1579 69.67 0 1783252..1785018 + 588 148272757 leuA CMM_1576 - 2-isopropylmalate synthase 1580 73.60 0 1785110..1785787 - 225 148272758 - CMM_1577 - hypothetical protein 1581 74.95 0 1785906..1786835 + 309 148272759 recO CMM_1578 - DNA repair protein /recombination protein 1582 72.43 0 1786832..1787698 + 288 148272760 uppS1 CMM_1579 - putative undecaprenyl pyrophosphate synthetase 1583 74.95 0 1787708..1788817 + 369 148272761 - CMM_1580 - putative oxidoreductase 1584 69.26 0 1788928..1790313 + 461 148272762 glyS CMM_1581 - glycyl-tRNA synthetase 1585 74.84 0 1790365..1790829 - 154 148272763 - CMM_1582 - hypothetical protein 1586 72.45 0 1790950..1791675 + 241 148272764 - CMM_1583 - hypothetical protein 1587 73.56 0 1791958..1793190 + 410 148272765 dusA CMM_1584 - putative tRNA-dihydrouridine synthase 1588 72.86 0 1793195..1794454 + 419 148272766 dgtA CMM_1585 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 1589 72.91 0 1794549..1796438 + 629 148272767 dnaG CMM_1586 - DNA primase 1590 69.02 0 1796639..1798294 + 551 148272768 - CMM_1587 - putative oligopeptide ABC transporter, substrate-binding protein 1591 70.14 0 1798439..1799533 + 364 148272769 - CMM_1588 - putative oligopeptide ABC transporter, permease component 1592 70.67 0 1799535..1800557 + 340 148272770 - CMM_1589 - putative oligopeptide ABC transporter, permease component 1593 73.96 0 1800554..1802266 + 570 148272771 - CMM_1590 - putative oligopeptide ABC transporter, ATP-binding protein 1594 77.11 +1 1802380..1803327 + 315 148272772 - CMM_1591 - putative oligopeptide ABC transporter, ATP-binding protein 1595 74.61 0 1803438..1804343 + 301 148272773 - CMM_1592 - putative 2-hydroxyacid dehydrogenase 1596 76.79 +1 1804431..1805438 + 335 148272774 - CMM_1593 - hypothetical protein 1597 75.07 0 1805458..1805826 - 122 148272775 - CMM_1594 - hypothetical protein 1598 73.19 0 1806057..1806623 - 188 148272776 defA CMM_1595 - putative polypeptide deformylase 1599 71.71 0 1806663..1807574 + 303 148272777 wcmE CMM_1596 - exporter DMT family membrane protein 1600 71.11 0 1807755..1809014 + 419 148272778 wcmF CMM_1597 - putative glycosyltransferase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0