version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1462 72.02 0 1648004..1648993 + 329 148272640 mutM CMM_1460 - putative formamidopyrimidine-DNA glycosylase involved in DNA repair 1463 69.96 0 1649193..1649678 - 161 148272641 dpsA CMM_1461 - putative stress induced DNA-binding protein 1464 77.80 +1 1649831..1655266 - 1811 148272642 - CMM_1462 - hypothetical protein 1465 68.73 -1 1655837..1657291 + 484 148272643 tig CMM_1463 - trigger factor 1466 65.82 -1 1657490..1658077 + 195 148272644 clpP1 CMM_1464 - ATP-dependent protease, proteolytic subunit 1467 69.46 0 1658114..1658794 + 226 148272645 clpP2 CMM_1465 - ATP-dependent Clp protease proteolytic subunit 1468 69.82 0 1658859..1660001 - 380 148272646 - CMM_1466 - putative monooxygenase 1469 67.60 -1 1660153..1661433 + 426 148272647 clpX CMM_1467 - ATP-dependent protease ATP-binding subunit 1470 72.24 0 1661515..1663578 - 687 148272648 dcpA CMM_1468 - putative peptidyl-dipeptidase 1471 73.63 0 1663618..1664421 + 267 148272649 - CMM_1469 - putative methylase 1472 70.83 0 1664434..1664697 - 87 148272650 - CMM_1470 - hypothetical protein 1473 72.85 0 1664697..1665149 - 150 148272651 - CMM_1471 - GNAT family acetyltransferase 1474 72.37 0 1665146..1667791 - 881 148272652 valS CMM_1472 - valyl-tRNA synthetase 1475 74.45 0 1667927..1669867 - 646 148272653 pckA CMM_1473 - phosphoenolpyruvate carboxykinase 1476 74.09 0 1669979..1671406 + 475 148272654 - CMM_1474 - Cro/CI family transcriptional regulator 1477 77.84 +1 1671425..1673089 - 554 148272655 - CMM_1475 - putative oligopeptide ABC transporter, ATP-binding protein 1478 75.96 0 1673086..1673946 - 286 148272656 - CMM_1476 - putative oligopeptide ABC transporter, permease component 1479 77.68 +1 1673943..1675013 - 356 148272657 - CMM_1477 - putative oligopeptide ABC transporter, permease component 1480 73.10 0 1675010..1676656 - 548 148272658 - CMM_1478 - putative oligopeptide ABC transporter, substrate-binding protein 1481 77.72 +1 1676761..1677366 + 201 148272659 - CMM_1479 - TetR family transcriptional regulator 1482 74.02 0 1677476..1678237 + 253 148272660 expA CMM_1480 - putative expansin 1483 76.13 0 1678314..1679063 + 249 148272661 - CMM_1481 - putative SAM-dependant methyltransferase 1484 71.21 0 1679310..1682612 + 1100 148272662 ileS CMM_1482 - isoleucyl-tRNA synthetase 1485 73.21 0 1682609..1684183 + 524 148272663 folC CMM_1483 - hypothetical protein 1486 75.50 0 1684180..1684677 + 165 148272664 - CMM_1484 - hypothetical protein 1487 72.38 0 1684687..1685106 + 139 148272665 ndkA CMM_1485 - hypothetical protein 1488 71.10 0 1685168..1685776 - 202 148272666 - CMM_1486 - hypothetical protein 1489 74.15 0 1686082..1689102 + 1006 148272667 - CMM_1487 - putative ribonuclease 1490 74.55 0 1689191..1689469 - 92 148272668 - CMM_1488 - hypothetical protein 1491 64.72 -2 1689759..1690067 + 102 148272669 rplU CMM_1489 - 50S ribosomal protein L21 1492 70.98 0 1690092..1690346 + 84 148272670 rpmA CMM_1490 - 50S ribosomal protein L27 1493 72.51 0 1690466..1692004 + 512 148272671 obgE CMM_1491 - GTPase ObgE 1494 74.36 0 1692008..1692787 + 259 148272672 proB CMM_1492 - gamma-glutamyl kinase 1495 74.06 0 1692835..1694133 + 432 148272673 proA CMM_1493 - hypothetical protein 1496 70.83 0 1694234..1694449 + 71 148272674 - CMM_1494 - hypothetical protein 1497 68.99 0 1694467..1695069 + 200 148272675 nadD CMM_1495 - nicotinic acid mononucleotide adenylyltransferase 1498 76.23 0 1695066..1696592 + 508 148272676 - CMM_1496 - hypothetical protein 1499 69.58 0 1696632..1697009 + 125 148272677 - CMM_1497 - hypothetical protein 1500 74.10 0 1697041..1697457 + 138 148272678 - CMM_1498 - hypothetical protein 1501 73.63 0 1697691..1698695 - 334 148272679 - CMM_1499 - hypothetical protein 1502 72.22 0 1698747..1699070 + 107 148272680 - CMM_1500 - hypothetical protein 1503 78.51 +1 1699112..1700116 + 334 148272681 - CMM_1501 - putative esterase 1504 75.79 0 1700253..1701041 + 262 148272682 - CMM_1502 - DeoR family transcriptional regulator 1505 76.75 +1 1701038..1702009 + 323 148272683 fruK CMM_1503 - putative 1-phosphofructokinase 1506 73.52 0 1702032..1704089 + 685 148272684 fruA CMM_1504 - phosphoenolpyruvate-dependent fructose phosphotransferase system, EIIA, EIIB, EIIC 1507 73.26 0 1704145..1704417 + 90 148272685 fruB CMM_1505 - phosphotransferase system, phosphocarrier protein HPr 1508 73.97 0 1704492..1706039 - 515 148272686 - CMM_1506 - putative short-chain dehydrogenase/oxidoreductase 1509 77.17 +1 1706121..1706396 - 91 148272687 - CMM_1506A - hypothetical protein 1510 71.07 0 1706484..1709024 + 846 148272688 - CMM_1507 - putative ATP-dependent helicase 1511 77.74 +1 1709021..1709950 + 309 148272689 - CMM_1508 - putative short chain dehydrogenase/oxidoreductase 1512 73.19 0 1709966..1711084 - 372 148272690 hisC1 CMM_1509 - histidinol-phosphate aminotransferase 1513 75.28 0 1711169..1712074 + 301 148272691 - CMM_1510 - putative hydrolase 1514 73.88 0 1712142..1712876 + 244 148272692 - CMM_1511 - putative hydrolase/acyltransferase 1515 75.31 0 1712908..1714353 + 481 148272693 - CMM_1512 - putative efflux MFS permease 1516 76.18 0 1714350..1715327 - 325 148272694 - CMM_1513 - putative Zn-dependant oxidoreductase 1517 66.84 -1 1715482..1716048 + 188 148272695 - CMM_1514 - hypothetical protein 1518 76.25 0 1716185..1717144 - 319 148272696 - CMM_1515 - putative hydrolase/acyltransferase 1519 75.56 0 1717308..1718240 - 310 148272697 - CMM_1516 - putative hydrolase/acyltransferase 1520 73.45 0 1718237..1719283 - 348 148272698 - CMM_1517 - hypothetical protein 1521 73.09 0 1719355..1722777 - 1140 148272699 dnaE1 CMM_1518 - DNA polymerase III, alpha chain 1522 71.64 0 1722892..1724259 + 455 148272700 zwfA1 CMM_1519 - glucose-6-phosphate 1-dehydrogenase 1523 76.75 +1 1724367..1725110 + 247 148272701 - CMM_1520 - putative carboxymethylenebutenolidase 1524 72.25 0 1725174..1726481 + 435 148272702 - CMM_1521 - LytR family transcriptional regulator 1525 76.44 0 1726516..1727436 - 306 148272703 - CMM_1522 - LysR family transcriptional regulator 1526 75.38 0 1727505..1728032 + 175 148272704 - CMM_1523 - putative acetyltransferase 1527 71.24 0 1728051..1728749 - 232 148272705 - CMM_1524 - nicotinamide mononucleotide transporter 1528 74.69 0 1728886..1729209 - 107 148272706 - CMM_1525 - hypothetical protein 1529 72.53 0 1729463..1730332 + 289 148272707 - CMM_1526 - putative oxidoreductase 1530 72.19 0 1730403..1731542 - 379 148272708 - CMM_1527 - hypothetical protein 1531 77.05 +1 1731539..1732270 - 243 148272709 - CMM_1528 - hypothetical protein 1532 71.08 0 1732461..1733366 + 301 148272710 proV CMM_1529 - putative proline/glycine/betaine/choline ABC transporter, ATP-binding protein 1533 69.94 0 1733363..1734064 + 233 148272711 proW CMM_1530 - putative proline/glycine/betaine/choline ABC transporter, permease component 1534 71.49 0 1734061..1734786 + 241 148272712 proZ CMM_1531 - putative proline/glycine/betaine/choline ABC transporter, permease component 1535 69.03 0 1734800..1735729 + 309 148272713 proX CMM_1532 - putative proline/glycine/betaine/choline ABC transporter, substrate-binding protein 1536 75.76 0 1735828..1736322 + 164 148272714 - CMM_1533 - hypothetical protein 1537 74.37 0 1736319..1737539 + 406 148272715 chsA CMM_1534 - putative chalcone synthase/polyketide synthase III 1538 76.76 +1 1737539..1738261 + 240 148272716 - CMM_1535 - hypothetical protein 1539 78.00 +1 1738258..1739448 + 396 148272717 - CMM_1536 - putative monooxygenase 1540 76.36 0 1739441..1740286 - 281 148272718 - CMM_1537 - putative polyprenyltransferase 1541 75.58 0 1740283..1740753 - 156 148272719 - CMM_1538 - putative acetyltransferase 1542 73.22 0 1740805..1741338 + 177 148272720 - CMM_1539 - putative N-acetyltransferase 1543 77.03 +1 1741632..1742075 - 147 148272721 - CMM_1540 - hypothetical protein 1544 67.59 -1 1742453..1743865 + 470 148272722 cydA CMM_1541 - cytochrome bd-type menaquinol oxidase subunit I 1545 68.96 0 1743865..1744869 + 334 148272723 cydB CMM_1542 - cytochrome bd-type menaquinol oxidase subunit II 1546 77.85 +1 1744877..1746637 + 586 148272724 cydD CMM_1543 - ABC transporter, ATP-binding protein involved in cytochrome bd biosynthesis 1547 77.52 +1 1746634..1748301 + 555 148272725 cydC CMM_1544 - transport ATP-binding protein CydC 1548 78.14 +1 1748332..1749150 - 272 148272726 - CMM_1545 - hypothetical protein 1549 77.05 +1 1749204..1750667 + 487 148272727 trpE2 CMM_1546 - putative anthranilate synthase component I 1550 70.34 0 1750767..1753322 + 851 148272728 leuS CMM_1547 - leucyl-tRNA synthetase 1551 79.17 +1 1753719..1754390 + 223 148272729 - CMM_1548 - putative protein involved in DNA uptake 1552 79.18 +1 1754387..1756144 + 585 148272730 - CMM_1549 - membrane protein, putatively involved in DNA uptake 1553 72.98 0 1756230..1757258 + 342 148272731 holA CMM_1550 - DNA polymerase III, delta subunit 1554 63.64 -2 1757361..1757624 - 87 148272732 rpsT CMM_1551 - 30S ribosomal protein S20 1555 75.53 0 1757760..1758278 - 172 148272733 - CMM_1552 - putative NUDIX hydrolase 1556 73.10 0 1758372..1759631 + 419 148272734 - CMM_1553 - putative amidohydrolase 1557 75.26 0 1759628..1760605 + 325 148272735 - CMM_1554 - NDP sugar epimerase, putative cell-division inhibitor 1558 68.61 -1 1760718..1762565 + 615 148272736 lepA CMM_1555 - GTP-binding protein LepA 1559 73.49 0 1762575..1763351 - 258 148272737 - CMM_1556 - putative secreted protein 1560 73.21 0 1763578..1764357 - 259 148272738 - CMM_1557 - putative secreted protein 1561 73.36 0 1764671..1765447 - 258 148272739 - CMM_1558 - putative secreted protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0