version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1394 75.10 0 1570129..1570863 + 244 148272572 - CMM_1392 - hypothetical protein 1395 67.61 -1 1570892..1571950 - 352 148272573 - CMM_1393 - AI-E2 family membrane protein 1396 77.59 +1 1571980..1573755 - 591 148272574 - CMM_1394 - hypothetical protein 1397 74.25 0 1574038..1575897 + 619 148272575 - CMM_1395 - hypothetical protein 1398 75.52 0 1575894..1576898 + 334 148272576 - CMM_1396 - putative thioredoxin 1399 72.29 0 1576974..1579553 - 859 148272577 glgB CMM_1397 - glycogen branching enzyme 1400 71.01 0 1579559..1581697 - 712 148272578 - CMM_1398 - putative glycosidase 1401 74.41 0 1582236..1584791 + 851 148272579 glgP CMM_1399 - putative glucan phosphorylase 1402 75.61 0 1584831..1586138 - 435 148272580 - CMM_1400 - hypothetical protein 1403 74.31 0 1586295..1588373 - 692 148272582 glgX CMM_1401 - putative glycosyl hydrolase 1404 77.03 +1 1588372..1589577 + 401 148272581 csdA CMM_1402 - putative cysteine desulfurase 1405 73.80 0 1589574..1590737 + 387 148272583 trmU CMM_1403 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1406 74.12 0 1590745..1593306 + 853 148272584 ligA CMM_1404 - NAD-dependent DNA ligase LigA 1407 76.43 0 1593419..1594801 + 460 148272585 - CMM_1405 - hypothetical protein 1408 76.10 0 1594813..1595268 - 151 148272586 - CMM_1406 - putative secreted protein 1409 73.44 0 1595316..1595684 + 122 148272587 gatC CMM_1407 - glutamyl-tRNA(Gln) amidotransferase subunit C 1410 73.64 0 1595692..1597239 + 515 148272588 gatA CMM_1408 - aspartyl/glutamyl-tRNA amidotransferase subunit A 1411 70.86 0 1597239..1598741 + 500 148272589 gatB CMM_1409 - aspartyl/glutamyl-tRNA amidotransferase subunit B 1412 74.73 0 1598738..1600375 + 545 148272590 - CMM_1410 - putative ABC transporter ATP-binding protein 1413 76.30 0 1600400..1602049 - 549 148272591 - CMM_1411 - putative secreted protein 1414 73.50 0 1602196..1602912 + 238 148272592 - CMM_1412 - hypothetical protein 1415 76.98 +1 1603039..1603707 + 222 148272593 - CMM_1413 - hypothetical protein 1416 74.19 0 1603756..1605444 - 562 148272594 - CMM_1414 - acyl-CoA synthetase 1417 74.94 0 1605541..1605987 - 148 148272595 - CMM_1415 - hypothetical protein 1418 75.09 0 1606061..1607509 - 482 148272596 - CMM_1416 - putative dehydrogenase 1419 72.17 0 1607519..1608517 - 332 148272597 - CMM_1417 - short chain dehydrogenase 1420 73.06 0 1608615..1610303 - 562 148272598 - CMM_1418 - acyl-CoA synthetase 1421 75.48 0 1610368..1611297 - 309 148272599 - CMM_1419 - putative short chain dehydrogenase/oxidoreductase 1422 77.50 +1 1611781..1612998 + 405 148272600 argE CMM_1420 - putative acetylornithine deacetylase 1423 74.59 0 1612995..1613486 - 163 148272601 - CMM_1421 - putative phosphoesterase 1424 75.47 0 1613567..1614100 + 177 148272602 - CMM_1422 - putative acetyltransferase 1425 74.96 0 1614159..1614773 + 204 148272603 - CMM_1423 - putative sulfite oxidase 1426 76.97 +1 1614770..1615516 + 248 148272604 - CMM_1424 - putative oxidoreductase 1427 76.59 0 1615581..1616114 + 177 148272605 - CMM_1425 - hypothetical protein 1428 75.08 0 1616230..1617228 + 332 148272606 - CMM_1426 - hypothetical protein 1429 73.55 0 1617311..1618603 + 430 148272607 dinB CMM_1427 - DNA polymerase IV 1430 75.79 0 1618615..1619118 + 167 148272608 - CMM_1428 - hypothetical protein 1431 72.83 0 1619167..1620480 - 437 148272609 udgA CMM_1429 - UDP-glucose 6-dehydrogenase 1432 71.82 0 1620650..1622452 - 600 148272610 treZ CMM_1430 - maltooligosyl trehalose trehalohydrolase 1433 73.43 0 1622449..1624800 - 783 148272611 treY CMM_1431 - maltooligosyltrehalose synthase 1434 68.75 -1 1624797..1627001 - 734 148272612 treX CMM_1432 - putative glucan debranching enzyme 1435 68.77 -1 1627212..1627544 + 110 148272613 - CMM_1433 - hypothetical protein 1436 73.60 0 1627819..1628481 + 220 148272614 - CMM_1434 - putative ABC-type transporter, permease component 1437 78.76 +1 1628484..1630046 + 520 148272615 - CMM_1435 - putative ABC transporter, ATP-binding protein 1438 76.73 +1 1630043..1630837 + 264 148272616 - CMM_1436 - putative ABC transporter, permease component 1439 79.05 +1 1630827..1631375 + 182 148272617 - CMM_1437 - hypothetical protein 1440 69.60 0 1631385..1631657 + 90 148272618 - CMM_1438 - hypothetical protein 1441 68.66 -1 1631752..1632102 - 116 148272619 - CMM_1439 - hypothetical protein 1442 69.24 0 1632354..1632974 - 206 148272620 ornA CMM_1440 - oligoribonuclease 1443 68.52 -1 1633031..1633246 + 71 148272621 - CMM_1441 - hypothetical protein 1444 77.56 +1 1633300..1633611 + 103 148272622 - CMM_1442 - putative thioredoxin 1445 70.80 0 1633739..1634560 + 273 148272623 nadE CMM_1443 - NAD synthetase 1446 74.15 0 1634639..1635346 - 235 148272624 - CMM_1444 - hypothetical protein 1447 73.00 0 1635428..1635664 - 78 148272625 - CMM_1445 - hypothetical protein 1448 68.37 -1 1635835..1636362 + 175 148272626 msrA CMM_1446 - putative peptide methionine sulfoxide reductase 1449 71.86 0 1636462..1636692 + 76 148272627 - CMM_1447 - hypothetical protein 1450 76.13 0 1636758..1637201 + 147 148272628 - CMM_1448 - hypothetical protein 1451 72.52 0 1637198..1637761 + 187 148272629 - CMM_1449 - MarR family transcriptional regulator 1452 76.37 0 1637758..1638231 + 157 148272630 - CMM_1450 - putative secreted protein 1453 67.68 -1 1638295..1639977 + 560 148272631 - CMM_1451 - putative ABC transporter ATP-binding protein 1454 73.54 0 1639982..1640461 + 159 148272632 - CMM_1452 - putative thioesterase 1455 72.19 0 1640482..1641387 - 301 148272633 tesB CMM_1453 - putative acyl-CoA thioesterase II 1456 78.45 +1 1641471..1642166 + 231 148272634 - CMM_1454 - hypothetical protein 1457 70.20 0 1642194..1642589 - 131 148272635 glbO CMM_1455 - hemoglobin-like protein 1458 71.67 0 1642589..1643908 - 439 148272636 - CMM_1456 - hypothetical protein 1459 71.07 0 1644071..1646614 - 847 148272637 pepN CMM_1457 - hypothetical protein 1460 71.13 0 1646766..1647392 + 208 148272638 - CMM_1458 - hypothetical protein 1461 71.78 0 1647509..1647997 + 162 148272639 rpiA CMM_1459 - ribose-5-phosphate isomerase B 1462 72.02 0 1648004..1648993 + 329 148272640 mutM CMM_1460 - putative formamidopyrimidine-DNA glycosylase involved in DNA repair 1463 69.96 0 1649193..1649678 - 161 148272641 dpsA CMM_1461 - putative stress induced DNA-binding protein 1464 77.80 +1 1649831..1655266 - 1811 148272642 - CMM_1462 - hypothetical protein 1465 68.73 -1 1655837..1657291 + 484 148272643 tig CMM_1463 - trigger factor 1466 65.82 -1 1657490..1658077 + 195 148272644 clpP1 CMM_1464 - ATP-dependent protease, proteolytic subunit 1467 69.46 0 1658114..1658794 + 226 148272645 clpP2 CMM_1465 - ATP-dependent Clp protease proteolytic subunit 1468 69.82 0 1658859..1660001 - 380 148272646 - CMM_1466 - putative monooxygenase 1469 67.60 -1 1660153..1661433 + 426 148272647 clpX CMM_1467 - ATP-dependent protease ATP-binding subunit 1470 72.24 0 1661515..1663578 - 687 148272648 dcpA CMM_1468 - putative peptidyl-dipeptidase 1471 73.63 0 1663618..1664421 + 267 148272649 - CMM_1469 - putative methylase 1472 70.83 0 1664434..1664697 - 87 148272650 - CMM_1470 - hypothetical protein 1473 72.85 0 1664697..1665149 - 150 148272651 - CMM_1471 - GNAT family acetyltransferase 1474 72.37 0 1665146..1667791 - 881 148272652 valS CMM_1472 - valyl-tRNA synthetase 1475 74.45 0 1667927..1669867 - 646 148272653 pckA CMM_1473 - phosphoenolpyruvate carboxykinase 1476 74.09 0 1669979..1671406 + 475 148272654 - CMM_1474 - Cro/CI family transcriptional regulator 1477 77.84 +1 1671425..1673089 - 554 148272655 - CMM_1475 - putative oligopeptide ABC transporter, ATP-binding protein 1478 75.96 0 1673086..1673946 - 286 148272656 - CMM_1476 - putative oligopeptide ABC transporter, permease component 1479 77.68 +1 1673943..1675013 - 356 148272657 - CMM_1477 - putative oligopeptide ABC transporter, permease component 1480 73.10 0 1675010..1676656 - 548 148272658 - CMM_1478 - putative oligopeptide ABC transporter, substrate-binding protein 1481 77.72 +1 1676761..1677366 + 201 148272659 - CMM_1479 - TetR family transcriptional regulator 1482 74.02 0 1677476..1678237 + 253 148272660 expA CMM_1480 - putative expansin 1483 76.13 0 1678314..1679063 + 249 148272661 - CMM_1481 - putative SAM-dependant methyltransferase 1484 71.21 0 1679310..1682612 + 1100 148272662 ileS CMM_1482 - isoleucyl-tRNA synthetase 1485 73.21 0 1682609..1684183 + 524 148272663 folC CMM_1483 - hypothetical protein 1486 75.50 0 1684180..1684677 + 165 148272664 - CMM_1484 - hypothetical protein 1487 72.38 0 1684687..1685106 + 139 148272665 ndkA CMM_1485 - hypothetical protein 1488 71.10 0 1685168..1685776 - 202 148272666 - CMM_1486 - hypothetical protein 1489 74.15 0 1686082..1689102 + 1006 148272667 - CMM_1487 - putative ribonuclease 1490 74.55 0 1689191..1689469 - 92 148272668 - CMM_1488 - hypothetical protein 1491 64.72 -2 1689759..1690067 + 102 148272669 rplU CMM_1489 - 50S ribosomal protein L21 1492 70.98 0 1690092..1690346 + 84 148272670 rpmA CMM_1490 - 50S ribosomal protein L27 1493 72.51 0 1690466..1692004 + 512 148272671 obgE CMM_1491 - GTPase ObgE 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0