version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1347 71.98 0 1523074..1524126 + 350 148272525 gpsA CMM_1345 - hypothetical protein 1348 74.14 0 1524129..1525238 + 369 148272526 ddlC CMM_1346 - D-alanine-D-alanine ligase 1349 77.23 +1 1525341..1526258 + 305 148272527 - CMM_1347 - putative glycosyltransferase 1350 75.24 0 1526215..1526727 - 170 148272528 - CMM_1348 - hypothetical protein 1351 78.18 +1 1526752..1527837 + 361 148272529 thiL CMM_1349 - thiamin-monophosphate kinase 1352 76.96 +1 1527834..1528445 - 203 148272530 - CMM_1350 - putative DNA methylase 1353 71.98 0 1528715..1529674 + 319 148272531 - CMM_1351 - putative regulatory protein, ATPase 1354 77.22 +1 1529700..1531007 + 435 148272532 - CMM_1352 - hypothetical protein 1355 77.75 +1 1531004..1533547 + 847 148272533 - CMM_1353 - putative membrane-bound protease 1356 74.95 0 1533544..1535727 + 727 148272534 recG CMM_1354 - ATP-dependent DNA helicase 1357 73.58 0 1535754..1536245 + 163 148272535 coaD CMM_1355 - hypothetical protein 1358 66.67 -1 1536265..1536837 + 190 148272536 - CMM_1356 - hypothetical protein 1359 65.20 -1 1536840..1537043 + 67 148272537 rpmF CMM_1357 - 50S ribosomal protein L32 1360 72.80 0 1537069..1537785 + 238 148272538 rnc CMM_1358 - ribonuclease III 1361 74.47 0 1537792..1538727 + 311 148272539 fpgA CMM_1359 - formamidopyrimidine-DNA glycosylase 1362 74.89 0 1538740..1539858 - 372 148272540 - CMM_1360 - putative acetyltransferase 1363 75.99 0 1540015..1543770 + 1251 148272541 smcA CMM_1361 - putative chromosome segregation ATPase 1364 70.32 0 1543791..1544666 + 291 148272542 ftsY CMM_1362 - Signal recognition particle component 1365 70.42 0 1544729..1546300 + 523 148272543 ffhA CMM_1363 - signal recognition particle protein 1366 72.49 0 1546445..1546822 + 125 148272544 - CMM_1364 - putative lyase 1367 75.00 0 1546832..1548031 - 399 148272545 - CMM_1365 - membrane-associated serine protease 1368 72.22 0 1548045..1549196 - 383 148272546 - CMM_1366 - hypothetical protein 1369 69.57 0 1549452..1549865 + 137 148272547 rpsP CMM_1367 - 30S ribosomal protein S16 1370 71.73 0 1549869..1550105 + 78 148272548 - CMM_1368 - hypothetical protein 1371 72.16 0 1550137..1550718 + 193 148272549 rimM CMM_1369 - putative 16S rRNA processing protein 1372 71.62 0 1550720..1551406 + 228 148272550 trmD CMM_1370 - putative tRNA (guanine-N1)-methyltransferase 1373 71.35 0 1551426..1552193 - 255 148272551 mapA1 CMM_1371 - putative methionine aminopeptidase 1374 74.80 0 1552264..1552755 + 163 148272552 - CMM_1372 - hypothetical protein 1375 66.38 -1 1552926..1553270 + 114 148272553 rplS CMM_1373 - 50S ribosomal protein L19 1376 67.60 -1 1553337..1554089 + 250 148272554 lepB CMM_1374 - putative signal peptidase I 1377 74.55 0 1554089..1554748 + 219 148272555 rnhB CMM_1375 - ribonuclease HII 1378 62.65 -2 1554822..1555145 + 107 148272556 - CMM_1376 - hypothetical protein 1379 73.11 0 1555257..1555613 + 118 148272557 - CMM_1377 - putative endonuclease 1380 76.11 0 1555613..1557169 + 518 148272558 - CMM_1378 - putative ATP-dependant serine protease 1381 76.85 +1 1557364..1558659 + 431 148272559 - CMM_1379 - hypothetical protein 1382 76.03 0 1558833..1559729 + 298 148272560 xerC CMM_1380 - integrase/recombinase 1383 76.09 0 1559800..1560351 - 183 148272561 - CMM_1381 - M23B family metallopeptidase 1384 68.29 -1 1560452..1561927 + 491 148272562 - CMM_1382 - putative sugar MFS permease 1385 67.83 -1 1562166..1563113 + 315 148272563 rpsB CMM_1383 - 30S ribosomal protein S2 1386 69.69 0 1563223..1564050 + 275 148272564 tsf CMM_1384 - elongation factor Ts 1387 70.15 0 1564207..1564923 + 238 148272565 pyrH CMM_1385 - hypothetical protein 1388 67.38 -1 1565037..1565594 + 185 148272566 frrA CMM_1386 - hypothetical protein 1389 72.62 0 1565595..1566635 + 346 148272567 cdsA CMM_1387 - putative phosphatidate cytidylyltransferase 1390 73.44 0 1566646..1567191 + 181 148272568 - CMM_1388 - hypothetical protein 1391 72.20 0 1567295..1567999 + 234 148272569 - CMM_1389 - hypothetical protein 1392 74.81 0 1568070..1569800 + 576 148272570 - CMM_1390 - CPA1 family Na+/H+ antiporter 1393 72.73 0 1569836..1570132 + 98 148272571 - CMM_1391 - putative ATP-/GTP-binding protein 1394 75.10 0 1570129..1570863 + 244 148272572 - CMM_1392 - hypothetical protein 1395 67.61 -1 1570892..1571950 - 352 148272573 - CMM_1393 - AI-E2 family membrane protein 1396 77.59 +1 1571980..1573755 - 591 148272574 - CMM_1394 - hypothetical protein 1397 74.25 0 1574038..1575897 + 619 148272575 - CMM_1395 - hypothetical protein 1398 75.52 0 1575894..1576898 + 334 148272576 - CMM_1396 - putative thioredoxin 1399 72.29 0 1576974..1579553 - 859 148272577 glgB CMM_1397 - glycogen branching enzyme 1400 71.01 0 1579559..1581697 - 712 148272578 - CMM_1398 - putative glycosidase 1401 74.41 0 1582236..1584791 + 851 148272579 glgP CMM_1399 - putative glucan phosphorylase 1402 75.61 0 1584831..1586138 - 435 148272580 - CMM_1400 - hypothetical protein 1403 74.31 0 1586295..1588373 - 692 148272582 glgX CMM_1401 - putative glycosyl hydrolase 1404 77.03 +1 1588372..1589577 + 401 148272581 csdA CMM_1402 - putative cysteine desulfurase 1405 73.80 0 1589574..1590737 + 387 148272583 trmU CMM_1403 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1406 74.12 0 1590745..1593306 + 853 148272584 ligA CMM_1404 - NAD-dependent DNA ligase LigA 1407 76.43 0 1593419..1594801 + 460 148272585 - CMM_1405 - hypothetical protein 1408 76.10 0 1594813..1595268 - 151 148272586 - CMM_1406 - putative secreted protein 1409 73.44 0 1595316..1595684 + 122 148272587 gatC CMM_1407 - glutamyl-tRNA(Gln) amidotransferase subunit C 1410 73.64 0 1595692..1597239 + 515 148272588 gatA CMM_1408 - aspartyl/glutamyl-tRNA amidotransferase subunit A 1411 70.86 0 1597239..1598741 + 500 148272589 gatB CMM_1409 - aspartyl/glutamyl-tRNA amidotransferase subunit B 1412 74.73 0 1598738..1600375 + 545 148272590 - CMM_1410 - putative ABC transporter ATP-binding protein 1413 76.30 0 1600400..1602049 - 549 148272591 - CMM_1411 - putative secreted protein 1414 73.50 0 1602196..1602912 + 238 148272592 - CMM_1412 - hypothetical protein 1415 76.98 +1 1603039..1603707 + 222 148272593 - CMM_1413 - hypothetical protein 1416 74.19 0 1603756..1605444 - 562 148272594 - CMM_1414 - acyl-CoA synthetase 1417 74.94 0 1605541..1605987 - 148 148272595 - CMM_1415 - hypothetical protein 1418 75.09 0 1606061..1607509 - 482 148272596 - CMM_1416 - putative dehydrogenase 1419 72.17 0 1607519..1608517 - 332 148272597 - CMM_1417 - short chain dehydrogenase 1420 73.06 0 1608615..1610303 - 562 148272598 - CMM_1418 - acyl-CoA synthetase 1421 75.48 0 1610368..1611297 - 309 148272599 - CMM_1419 - putative short chain dehydrogenase/oxidoreductase 1422 77.50 +1 1611781..1612998 + 405 148272600 argE CMM_1420 - putative acetylornithine deacetylase 1423 74.59 0 1612995..1613486 - 163 148272601 - CMM_1421 - putative phosphoesterase 1424 75.47 0 1613567..1614100 + 177 148272602 - CMM_1422 - putative acetyltransferase 1425 74.96 0 1614159..1614773 + 204 148272603 - CMM_1423 - putative sulfite oxidase 1426 76.97 +1 1614770..1615516 + 248 148272604 - CMM_1424 - putative oxidoreductase 1427 76.59 0 1615581..1616114 + 177 148272605 - CMM_1425 - hypothetical protein 1428 75.08 0 1616230..1617228 + 332 148272606 - CMM_1426 - hypothetical protein 1429 73.55 0 1617311..1618603 + 430 148272607 dinB CMM_1427 - DNA polymerase IV 1430 75.79 0 1618615..1619118 + 167 148272608 - CMM_1428 - hypothetical protein 1431 72.83 0 1619167..1620480 - 437 148272609 udgA CMM_1429 - UDP-glucose 6-dehydrogenase 1432 71.82 0 1620650..1622452 - 600 148272610 treZ CMM_1430 - maltooligosyl trehalose trehalohydrolase 1433 73.43 0 1622449..1624800 - 783 148272611 treY CMM_1431 - maltooligosyltrehalose synthase 1434 68.75 -1 1624797..1627001 - 734 148272612 treX CMM_1432 - putative glucan debranching enzyme 1435 68.77 -1 1627212..1627544 + 110 148272613 - CMM_1433 - hypothetical protein 1436 73.60 0 1627819..1628481 + 220 148272614 - CMM_1434 - putative ABC-type transporter, permease component 1437 78.76 +1 1628484..1630046 + 520 148272615 - CMM_1435 - putative ABC transporter, ATP-binding protein 1438 76.73 +1 1630043..1630837 + 264 148272616 - CMM_1436 - putative ABC transporter, permease component 1439 79.05 +1 1630827..1631375 + 182 148272617 - CMM_1437 - hypothetical protein 1440 69.60 0 1631385..1631657 + 90 148272618 - CMM_1438 - hypothetical protein 1441 68.66 -1 1631752..1632102 - 116 148272619 - CMM_1439 - hypothetical protein 1442 69.24 0 1632354..1632974 - 206 148272620 ornA CMM_1440 - oligoribonuclease 1443 68.52 -1 1633031..1633246 + 71 148272621 - CMM_1441 - hypothetical protein 1444 77.56 +1 1633300..1633611 + 103 148272622 - CMM_1442 - putative thioredoxin 1445 70.80 0 1633739..1634560 + 273 148272623 nadE CMM_1443 - NAD synthetase 1446 74.15 0 1634639..1635346 - 235 148272624 - CMM_1444 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0