version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1301 75.37 0 1472374..1473798 + 474 148272479 - CMM_1299 - putative xylulose kinase 1302 72.82 0 1473870..1475105 + 411 148272480 - CMM_1300 - putative ATPase, type II/type IV pathway secretion protein 1303 75.12 0 1475102..1475965 + 287 148272481 - CMM_1301 - membrane protein, putative pilus assembly protein 1304 75.08 0 1475962..1476912 + 316 148272482 - CMM_1302 - membrane protein, putative pilus assembly protein 1305 68.72 -1 1476963..1477157 + 64 148272483 - CMM_1303 - hypothetical protein 1306 75.40 0 1477157..1477534 + 125 148272484 - CMM_1304 - hypothetical protein 1307 76.10 0 1477509..1477964 + 151 148272485 - CMM_1305 - hypothetical protein 1308 77.22 +1 1477961..1478500 + 179 148272486 - CMM_1306 - putative secreted protein 1309 73.55 0 1478508..1479815 - 435 148272487 - CMM_1307 - putative MFS permease 1310 68.21 -1 1479891..1480994 + 367 148272488 prfB CMM_1308 - peptide chain release factor RF-2 1311 75.24 0 1481070..1482737 + 555 148272489 ftsE CMM_1309 - putative ABC transporter, ATP-binding protein involved in cell division 1312 65.25 -1 1482734..1483651 + 305 148272490 ftsX CMM_1310 - putative ABC transporter, permease component,involved in cell division 1313 67.92 -1 1483718..1484194 + 158 148272491 smpB CMM_1311 - SsrA-binding protein 1314 68.43 -1 1484812..1486623 - 603 148272492 - CMM_1312 - putative iron ABC transporter, permease component 1315 72.40 0 1486626..1487654 - 342 148272493 - CMM_1313 - putative iron ABC transporter, ATPase component 1316 69.90 0 1487654..1488736 - 360 148272494 - CMM_1314 - putative iron ABC transporter, substrate-binding protein 1317 72.72 0 1488976..1490478 + 500 148272495 - CMM_1315 - putative MFS-type efflux protein 1318 73.55 0 1490510..1491322 - 270 148272496 - CMM_1316 - putative monophosphatase 1319 73.35 0 1491333..1492409 - 358 148272497 - CMM_1317 - putative GTPase 1320 76.50 0 1492406..1493869 - 487 148272498 aroA CMM_1318 - 3-phosphoshikimate 1-carboxyvinyltransferase 1321 69.33 0 1493934..1494758 + 274 148272499 sigH CMM_1319 - ECF subfamily RNA polymerase sigma factor 1322 68.72 -1 1494755..1494997 + 80 148272500 rsrA CMM_1320 - putative anti-sigma factor 1323 72.11 0 1495033..1495473 + 146 148272501 - CMM_1321 - putative acetyl transferase 1324 69.60 0 1495574..1499392 - 1272 148272502 kgd CMM_1322 - alpha-ketoglutarate decarboxylase 1325 76.46 0 1499573..1501012 + 479 148272503 guaB3 CMM_1323 - inositol-5-monophosphate dehydrogenase 1326 72.05 0 1501126..1502556 + 476 148272504 - CMM_1324 - hypothetical protein 1327 70.40 0 1502549..1503592 + 347 148272505 - CMM_1325 - hypothetical protein 1328 73.70 0 1503662..1504741 - 359 148272506 - CMM_1326 - putative oxidoreductase 1329 78.99 +1 1504825..1505757 + 310 148272507 - CMM_1327 - hypothetical protein 1330 70.34 0 1505754..1506434 - 226 148272508 - CMM_1328 - hypothetical protein 1331 74.21 0 1506642..1506959 + 105 148272509 - CMM_1329 - hypothetical protein 1332 74.08 0 1507035..1508315 + 426 148272510 - CMM_1330 - putative MFS permease 1333 67.73 -1 1508355..1509011 - 218 148272511 - CMM_1331 - putative two-component system response regulator 1334 74.13 0 1509039..1510271 - 410 148272512 - CMM_1332 - hypothetical protein 1335 73.33 0 1510268..1511422 - 384 148272513 - CMM_1333 - putative two-component system sensor kinase 1336 73.27 0 1511593..1512273 - 226 148272514 - CMM_1334 - putative two-component system response regulator 1337 74.53 0 1512393..1513562 - 389 148272515 metX CMM_1335 - homoserine O-acetyltransferase 1338 71.85 0 1513646..1515016 - 456 148272516 metY CMM_1336 - O-acetylhomoserine aminocarboxypropyltransferase 1339 74.31 0 1515152..1515949 + 265 148272517 - CMM_1337 - putative oxidoreductase 1340 74.37 0 1515988..1516662 - 224 148272518 - CMM_1338 - TetR family transcriptional regulator 1341 66.11 -1 1516782..1517852 + 356 148272519 - CMM_1339 - TerC family integral membrane export protein 1342 74.94 0 1517849..1518670 + 273 148272520 - CMM_1340 - putative serine/threonine protein phosphatase 1343 72.11 0 1518748..1520217 + 489 148272521 leuC CMM_1341 - isopropylmalate isomerase large subunit 1344 69.59 0 1520220..1520834 + 204 148272522 leuD CMM_1342 - isopropylmalate isomerase small subunit 1345 70.28 0 1520877..1522205 + 442 148272523 murA CMM_1343 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1346 72.49 0 1522329..1523066 + 245 148272524 - CMM_1344 - putative sugar phosphate acyltransferase 1347 71.98 0 1523074..1524126 + 350 148272525 gpsA CMM_1345 - hypothetical protein 1348 74.14 0 1524129..1525238 + 369 148272526 ddlC CMM_1346 - D-alanine-D-alanine ligase 1349 77.23 +1 1525341..1526258 + 305 148272527 - CMM_1347 - putative glycosyltransferase 1350 75.24 0 1526215..1526727 - 170 148272528 - CMM_1348 - hypothetical protein 1351 78.18 +1 1526752..1527837 + 361 148272529 thiL CMM_1349 - thiamin-monophosphate kinase 1352 76.96 +1 1527834..1528445 - 203 148272530 - CMM_1350 - putative DNA methylase 1353 71.98 0 1528715..1529674 + 319 148272531 - CMM_1351 - putative regulatory protein, ATPase 1354 77.22 +1 1529700..1531007 + 435 148272532 - CMM_1352 - hypothetical protein 1355 77.75 +1 1531004..1533547 + 847 148272533 - CMM_1353 - putative membrane-bound protease 1356 74.95 0 1533544..1535727 + 727 148272534 recG CMM_1354 - ATP-dependent DNA helicase 1357 73.58 0 1535754..1536245 + 163 148272535 coaD CMM_1355 - hypothetical protein 1358 66.67 -1 1536265..1536837 + 190 148272536 - CMM_1356 - hypothetical protein 1359 65.20 -1 1536840..1537043 + 67 148272537 rpmF CMM_1357 - 50S ribosomal protein L32 1360 72.80 0 1537069..1537785 + 238 148272538 rnc CMM_1358 - ribonuclease III 1361 74.47 0 1537792..1538727 + 311 148272539 fpgA CMM_1359 - formamidopyrimidine-DNA glycosylase 1362 74.89 0 1538740..1539858 - 372 148272540 - CMM_1360 - putative acetyltransferase 1363 75.99 0 1540015..1543770 + 1251 148272541 smcA CMM_1361 - putative chromosome segregation ATPase 1364 70.32 0 1543791..1544666 + 291 148272542 ftsY CMM_1362 - Signal recognition particle component 1365 70.42 0 1544729..1546300 + 523 148272543 ffhA CMM_1363 - signal recognition particle protein 1366 72.49 0 1546445..1546822 + 125 148272544 - CMM_1364 - putative lyase 1367 75.00 0 1546832..1548031 - 399 148272545 - CMM_1365 - membrane-associated serine protease 1368 72.22 0 1548045..1549196 - 383 148272546 - CMM_1366 - hypothetical protein 1369 69.57 0 1549452..1549865 + 137 148272547 rpsP CMM_1367 - 30S ribosomal protein S16 1370 71.73 0 1549869..1550105 + 78 148272548 - CMM_1368 - hypothetical protein 1371 72.16 0 1550137..1550718 + 193 148272549 rimM CMM_1369 - putative 16S rRNA processing protein 1372 71.62 0 1550720..1551406 + 228 148272550 trmD CMM_1370 - putative tRNA (guanine-N1)-methyltransferase 1373 71.35 0 1551426..1552193 - 255 148272551 mapA1 CMM_1371 - putative methionine aminopeptidase 1374 74.80 0 1552264..1552755 + 163 148272552 - CMM_1372 - hypothetical protein 1375 66.38 -1 1552926..1553270 + 114 148272553 rplS CMM_1373 - 50S ribosomal protein L19 1376 67.60 -1 1553337..1554089 + 250 148272554 lepB CMM_1374 - putative signal peptidase I 1377 74.55 0 1554089..1554748 + 219 148272555 rnhB CMM_1375 - ribonuclease HII 1378 62.65 -2 1554822..1555145 + 107 148272556 - CMM_1376 - hypothetical protein 1379 73.11 0 1555257..1555613 + 118 148272557 - CMM_1377 - putative endonuclease 1380 76.11 0 1555613..1557169 + 518 148272558 - CMM_1378 - putative ATP-dependant serine protease 1381 76.85 +1 1557364..1558659 + 431 148272559 - CMM_1379 - hypothetical protein 1382 76.03 0 1558833..1559729 + 298 148272560 xerC CMM_1380 - integrase/recombinase 1383 76.09 0 1559800..1560351 - 183 148272561 - CMM_1381 - M23B family metallopeptidase 1384 68.29 -1 1560452..1561927 + 491 148272562 - CMM_1382 - putative sugar MFS permease 1385 67.83 -1 1562166..1563113 + 315 148272563 rpsB CMM_1383 - 30S ribosomal protein S2 1386 69.69 0 1563223..1564050 + 275 148272564 tsf CMM_1384 - elongation factor Ts 1387 70.15 0 1564207..1564923 + 238 148272565 pyrH CMM_1385 - hypothetical protein 1388 67.38 -1 1565037..1565594 + 185 148272566 frrA CMM_1386 - hypothetical protein 1389 72.62 0 1565595..1566635 + 346 148272567 cdsA CMM_1387 - putative phosphatidate cytidylyltransferase 1390 73.44 0 1566646..1567191 + 181 148272568 - CMM_1388 - hypothetical protein 1391 72.20 0 1567295..1567999 + 234 148272569 - CMM_1389 - hypothetical protein 1392 74.81 0 1568070..1569800 + 576 148272570 - CMM_1390 - CPA1 family Na+/H+ antiporter 1393 72.73 0 1569836..1570132 + 98 148272571 - CMM_1391 - putative ATP-/GTP-binding protein 1394 75.10 0 1570129..1570863 + 244 148272572 - CMM_1392 - hypothetical protein 1395 67.61 -1 1570892..1571950 - 352 148272573 - CMM_1393 - AI-E2 family membrane protein 1396 77.59 +1 1571980..1573755 - 591 148272574 - CMM_1394 - hypothetical protein 1397 74.25 0 1574038..1575897 + 619 148272575 - CMM_1395 - hypothetical protein 1398 75.52 0 1575894..1576898 + 334 148272576 - CMM_1396 - putative thioredoxin 1399 72.29 0 1576974..1579553 - 859 148272577 glgB CMM_1397 - glycogen branching enzyme 1400 71.01 0 1579559..1581697 - 712 148272578 - CMM_1398 - putative glycosidase 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0