version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1170 67.89 -1 1335010..1335909 + 299 148272348 atpG CMM_1168 - F0F1 ATP synthase subunit gamma 1171 67.42 -1 1335945..1337405 + 486 148272349 atpD CMM_1169 - F0F1 ATP synthase subunit beta 1172 70.37 0 1337407..1337676 + 89 148272350 atpC CMM_1170 - F0F1 ATP synthase subunit epsilon 1173 74.21 0 1337796..1338551 + 251 148272351 - CMM_1171 - hypothetical protein 1174 72.73 0 1338564..1339157 - 197 148272352 tag CMM_1172 - putative DNA-3-methyladenine glycosylase I 1175 76.56 0 1339154..1339618 - 154 148272353 ogtB CMM_1173 - putative methylated-DNA--protein-cysteine methyltransferase 1176 71.46 0 1339881..1340360 - 159 148272354 - CMM_1174 - AsnC family transcriptional regulator 1177 79.26 +1 1340590..1341780 + 396 148272355 - CMM_1175 - hypothetical protein 1178 74.79 0 1341777..1342613 + 278 148272356 - CMM_1176 - putative protein serine/threonine phosphatase 1179 74.17 0 1342644..1343642 - 332 148272357 dapD CMM_1177 - putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1180 73.77 0 1343723..1344820 + 365 148272358 dapE CMM_1178 - dipeptidase 1181 74.05 0 1344802..1346034 + 410 148272359 - CMM_1179 - hypothetical protein 1182 67.82 -1 1346182..1346355 + 57 148272360 - CMM_1180 - hypothetical protein 1183 74.25 0 1346465..1347097 - 210 148272361 - CMM_1181 - putative O-methyltransferase 1184 71.20 0 1347248..1347622 + 124 148272362 tatB CMM_1182 - putative sec-independent protein translocase protein, twin arginine pathway 1185 75.38 0 1347668..1348585 - 305 148272363 - CMM_1183 - LysR family transcriptional regulator 1186 71.70 0 1348665..1348823 + 52 148272364 - CMM_1184 - hypothetical protein 1187 75.85 0 1348915..1350090 - 391 148272365 - CMM_1185 - putative ATP-binding protein 1188 71.58 0 1350080..1350628 - 182 148272366 - CMM_1186 - hypothetical protein 1189 72.23 0 1350612..1351958 - 448 148272367 - CMM_1187 - Mg2+ transporter 1190 73.09 0 1352017..1352685 + 222 148272368 - CMM_1188 - hypothetical protein 1191 74.74 0 1352714..1354336 - 540 148272369 pepP2 CMM_1189 - putative Xaa-Pro aminopeptidase 1192 73.22 0 1354385..1355422 - 345 148272370 - CMM_1190 - putative membrane protein with hydrolase activity 1193 74.43 0 1355503..1356378 + 291 148272371 - CMM_1191 - hypothetical protein 1194 71.83 0 1356467..1357996 - 509 148272372 rhlE CMM_1192 - putative ATP-dependent RNA helicase 1195 73.62 0 1358104..1358865 + 253 148272373 - CMM_1193 - hypothetical protein 1196 74.65 0 1358947..1359234 - 95 148272374 - CMM_1194 - hypothetical protein 1197 69.33 0 1359244..1359468 - 74 148272375 - CMM_1195 - hypothetical protein 1198 76.94 +1 1359662..1362931 + 1089 148272376 uvrD1 CMM_1196 - putative ATP-dependant DNA helicase/nuclease 1199 74.76 0 1362928..1366203 + 1091 148272377 uvrD2 CMM_1197 - putative ATP-dependent DNA helicase 1200 73.26 0 1366116..1367192 - 358 148272378 - CMM_1198 - putative phosphotransferase 1201 74.74 0 1367328..1368281 + 317 148272379 - CMM_1199 - putative NTP pyrophosphohydrolase 1202 74.14 0 1368292..1370205 + 637 148272380 uvrD3 CMM_1200 - putative ATP-dependent DNA helicase 1203 77.36 +1 1370069..1370956 - 295 148272381 - CMM_1201 - hypothetical protein 1204 74.57 0 1371099..1372502 - 467 148272382 - CMM_1202 - hypothetical protein 1205 74.18 0 1372715..1373806 + 363 148272383 - CMM_1203 - ATP-dependant serine protease 1206 68.77 -1 1373947..1376898 + 983 148272384 - CMM_1204 - conseved membrane protein 1207 73.72 0 1377208..1377873 - 221 148272385 - CMM_1205 - putative peroxiredoxin 1208 73.29 0 1377992..1379713 - 573 148272386 - CMM_1206 - putative protein kinase 1209 75.92 0 1379710..1380282 - 190 148272387 - CMM_1207 - PadR family transcriptional regulator 1210 71.69 0 1380411..1381406 - 331 148272388 lipA CMM_1208 - lipoyl synthase 1211 73.93 0 1381403..1382104 - 233 148272389 lipB CMM_1209 - lipoyltransferase 1212 77.78 +1 1382208..1383107 + 299 148272390 - CMM_1210 - putative siderophore-interacting protein 1213 75.51 0 1383261..1383848 + 195 148272391 - CMM_1211 - hypothetical protein 1214 74.54 0 1383874..1384521 + 215 148272392 - CMM_1212 - hypothetical protein 1215 69.98 0 1384572..1385234 + 220 148272393 - CMM_1213 - hypothetical protein 1216 74.93 0 1385245..1385583 - 112 148272394 - CMM_1214 - hypothetical protein 1217 75.34 0 1386030..1389488 + 1152 148272395 - CMM_1215 - hypothetical protein 1218 76.54 0 1389546..1390244 - 232 148272396 - CMM_1216 - CDF family cation efflux protein 1219 75.42 0 1390241..1390594 - 117 148272397 - CMM_1217 - ArsR family transcriptional regulator 1220 75.11 0 1390705..1391142 + 145 148272398 - CMM_1218 - hypothetical protein 1221 78.31 +1 1391174..1391800 - 208 148272399 - CMM_1219 - TetR family transcriptional regulator 1222 77.15 +1 1391878..1393194 + 438 148272400 - CMM_1220 - putative carboxylesterase 1223 75.85 0 1393337..1394131 + 264 148272401 - CMM_1221 - hypothetical protein 1224 77.93 +1 1394148..1395008 - 286 148272402 - CMM_1222 - putative hydrolase 1225 76.01 0 1395005..1395571 - 188 148272403 - CMM_1223 - putative acetyltransferase 1226 70.77 0 1395742..1395936 + 64 148272404 - CMM_1224 - hypothetical protein 1227 71.55 0 1396033..1397793 - 586 148272405 - CMM_1225 - putative ATP-dependent RNA helicase 1228 76.46 0 1397886..1398641 - 251 148272406 - CMM_1226 - hypothetical protein 1229 79.02 +1 1398721..1399578 - 285 148272407 - CMM_1227 - putative methyltransferase 1230 74.29 0 1399626..1400255 + 209 148272408 - CMM_1228 - Cro/CI family transcriptional regulator 1231 78.56 +1 1400252..1401739 - 495 148272409 - CMM_1229 - hypothetical protein 1232 80.09 +1 1401878..1402093 - 71 148272410 - CMM_1230 - hypothetical protein 1233 77.72 +1 1402248..1402871 - 207 148272411 - CMM_1231 - putative carboxylesterase/phospholipase 1234 73.93 0 1402868..1403845 - 325 148272412 - CMM_1232 - putative dioxygenase 1235 72.16 0 1403907..1404470 - 187 148272413 - CMM_1233 - hypothetical protein 1236 75.35 0 1404553..1405680 + 375 148272414 - CMM_1234 - hypothetical protein 1237 72.34 0 1405686..1406126 - 146 148272415 - CMM_1235 - hypothetical protein 1238 76.30 0 1406232..1406501 + 89 148272416 - CMM_1236 - hypothetical protein 1239 72.68 0 1406568..1407698 + 376 148272417 - CMM_1237 - putative NDP-sugar phosphate epimerase 1240 76.92 +1 1407685..1408923 - 412 148272418 - CMM_1238 - hypothetical protein 1241 74.54 0 1409053..1409979 + 308 148272419 - CMM_1239 - putative multidrug ABC transporter, ATPase component 1242 71.30 0 1409976..1410839 + 287 148272420 - CMM_1240 - putative multidrug ABC transporter, permease component 1243 77.57 +1 1410843..1412144 + 433 148272421 - CMM_1241 - putative two-component system, sensor kinase 1244 77.19 +1 1412141..1412815 + 224 148272422 - CMM_1242 - putative two-component system, response regulator 1245 68.15 -1 1413116..1414258 + 380 148272423 - CMM_1243 - putative sugar ABC transporter, substrate-binding protein 1246 67.31 -1 1414382..1415926 + 514 148272424 - CMM_1244 - putative sugar ABC transporter, ATP-binding protein 1247 69.56 0 1415923..1417131 + 402 148272425 - CMM_1245 - putative sugar ABC transporter, permease component 1248 74.74 0 1417252..1417536 + 94 148272426 - CMM_1246 - hypothetical protein 1249 75.28 0 1417546..1418346 - 266 148272427 sipX CMM_1247 - putative signal peptidase I 1250 73.53 0 1418373..1419275 - 300 148272428 - CMM_1248 - hypothetical protein 1251 74.30 0 1419272..1419874 - 200 148272429 - CMM_1249 - hypothetical protein 1252 69.23 0 1419971..1420516 - 181 148272430 - CMM_1250 - hypothetical protein 1253 74.86 0 1420874..1422520 + 548 148272431 - CMM_1251 - putative two-component system, sensor histidine kinase 1254 68.85 0 1422657..1424486 + 609 148272432 - CMM_1252 - BCCT family choline/glycine betaine transporter 1255 71.09 0 1424616..1425632 + 338 148272433 - CMM_1253 - putative diacylglycerol kinase 1256 74.81 0 1425688..1426866 + 392 148272434 - CMM_1254 - putative ATPase 1257 66.49 -1 1426991..1428094 - 367 148272435 - CMM_1255 - putative fatty acid desaturase 1258 73.75 0 1428412..1429455 - 347 148272436 - CMM_1256 - putative Zn-dependent alcohol dehydrogenase 1259 78.49 +1 1429505..1430248 - 247 148272437 - CMM_1257 - hypothetical protein 1260 75.77 0 1430413..1431060 + 215 148272438 - CMM_1258 - hypothetical protein 1261 74.40 0 1431088..1434114 - 1008 148272439 - CMM_1259 - putative alpha-mannosidase 1262 67.66 -1 1434234..1435142 - 302 148272440 - CMM_1260 - putative sugar ABC transporter, permease component 1263 70.55 0 1435145..1436149 - 334 148272441 - CMM_1261 - putative sugar ABC transporter, permease component 1264 68.46 -1 1436152..1437543 - 463 148272442 - CMM_1262 - putative sugar ABC transporter, substrate binding protein 1265 76.30 0 1437721..1438986 - 421 148272443 - CMM_1263 - ROK family transcriptional regulator 1266 75.61 0 1439158..1440297 + 379 148272444 - CMM_1264 - hypothetical protein 1267 78.88 +1 1440294..1440596 + 100 148272445 - CMM_1265 - hypothetical protein 1268 74.56 0 1440613..1441524 - 303 148272446 - CMM_1266 - putative Zn-metalloprotease 1269 77.62 +1 1441556..1442185 - 209 148272447 - CMM_1267 - putative DNA alkylation repair enzyme 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0