version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1122 76.27 0 1282117..1282803 + 228 148272300 ungA CMM_1120 - uracil-DNA glycosylase 1123 73.19 0 1282857..1283546 + 229 148272301 - CMM_1121 - putative acetyltransferase 1124 70.95 0 1283428..1284360 - 310 148272302 - CMM_1122 - putative membrane bound protease 1125 71.47 0 1286708..1287331 - 207 148272303 sgaH CMM_1123 - putative hexulose-6-phosphate synthase 1126 75.53 0 1287384..1287992 - 202 148272304 - CMM_1124 - putative 6-phospho-3-hexuloisomerase 1127 77.52 +1 1288259..1289437 + 392 148272305 - CMM_1125 - LuxR family transcriptional regulator 1128 72.91 0 1289562..1291709 + 715 148272306 - CMM_1126 - putative 5'-nucleotidase 1129 75.77 0 1291820..1293247 + 475 148272307 - CMM_1127 - putative Asp/Glu-tRNA amidotransferase 1130 74.25 0 1293257..1293994 - 245 148272308 - CMM_1128 - hypothetical protein 1131 74.32 0 1294075..1295067 + 330 148272309 - CMM_1129 - putative siderophore-interacting protein 1132 74.86 0 1295500..1296378 - 292 148272310 - CMM_1130 - putative short chain alcohol dehydrogenase 1133 74.81 0 1296375..1296767 - 130 148272311 - CMM_1131 - hypothetical protein 1134 74.34 0 1296764..1298197 - 477 148272312 - CMM_1132 - putative pyridine nucleotide-disulphide oxidoreductase 1135 77.50 +1 1298254..1299093 - 279 148272313 echA CMM_1133 - enoyl-CoA hydratase 1136 76.04 0 1299162..1300004 - 280 148272314 - CMM_1134 - hypothetical protein 1137 70.05 0 1300110..1300760 - 216 148272315 - CMM_1135 - putative F420-dependent NADP reductase 1138 68.95 0 1300855..1301598 - 247 148272316 - CMM_1136 - hypothetical protein 1139 75.28 0 1301683..1303725 - 680 148272317 - CMM_1137 - hypothetical protein 1140 77.46 +1 1303814..1304239 - 141 148272318 - CMM_1138 - hypothetical protein 1141 75.00 0 1304368..1304679 - 103 148272319 - CMM_1139 - hypothetical protein 1142 74.49 0 1305414..1306103 + 229 148272320 - CMM_1140 - putative pyridoxamine-phosphate oxidase 1143 77.43 +1 1306214..1306984 + 256 148272321 - CMM_1141 - putative glutamine amidotransferase 1144 74.47 0 1307034..1307789 - 251 148272322 - CMM_1142 - putative short chain alcohol dehydrogenase 1145 76.95 +1 1307786..1308553 - 255 148272323 - CMM_1143 - putative short chain alcohol dehydrogenase 1146 71.65 0 1308550..1309935 - 461 148272324 - CMM_1144 - putative MFS permease 1147 68.91 0 1309970..1310860 - 296 148272325 - CMM_1145 - putative deacetylase 1148 77.97 +1 1310886..1311911 - 341 148272326 - CMM_1146 - putative asparaginase 1149 74.93 0 1312083..1313111 + 342 148272327 - CMM_1147 - LacI family transcriptional regulator 1150 74.59 0 1313187..1313981 + 264 148272328 - CMM_1148 - hypothetical protein 1151 75.46 0 1314009..1314656 - 215 148272329 - CMM_1149 - hypothetical protein 1152 71.59 0 1314856..1316520 + 554 148272330 argS CMM_1150 - arginyl-tRNA synthetase 1153 71.31 0 1316632..1317363 + 243 148272331 - CMM_1151 - hypothetical protein 1154 74.93 0 1317520..1319019 + 499 148272332 lysA CMM_1152 - hypothetical protein 1155 74.02 0 1319016..1320347 + 443 148272333 thrA CMM_1153 - homoserine dehydrogenase 1156 71.03 0 1320347..1321423 + 358 148272334 thrC CMM_1154 - threonine synthase 1157 74.55 0 1321435..1322385 + 316 148272335 thrB CMM_1155 - homoserine kinase 1158 75.08 0 1322682..1325153 + 823 148272336 - CMM_1156 - transcription termination factor Rho 1159 70.93 0 1325159..1326238 + 359 148272337 prfA CMM_1157 - peptide chain release factor 1 1160 77.51 +1 1326263..1327138 + 291 148272338 - CMM_1158 - putative methylase of peptide chain release factors 1161 75.69 0 1327166..1327819 - 217 148272339 - CMM_1159 - hypothetical protein 1162 76.45 0 1327903..1328832 + 309 148272340 - CMM_1160 - hypothetical protein 1163 70.30 0 1328829..1330148 + 439 148272341 rfeA CMM_1161 - putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 1164 69.00 0 1330145..1330615 + 156 148272342 - CMM_1162 - hypothetical protein 1165 64.31 -2 1330770..1331618 + 282 148272343 atpB CMM_1163 - F0F1 ATP synthase subunit A 1166 67.09 -1 1331665..1331898 + 77 148272344 atpE CMM_1164 - ATP synthase C chain (Lipid-binding protein) 1167 71.78 0 1331910..1332476 + 188 148272345 atpF CMM_1165 - F0F1 ATP synthase subunit B 1168 72.35 0 1332476..1333267 + 263 148272346 atpH CMM_1166 - F0F1 ATP synthase subunit delta 1169 67.89 -1 1333323..1334960 + 545 148272347 atpA CMM_1167 - F0F1 ATP synthase subunit alpha 1170 67.89 -1 1335010..1335909 + 299 148272348 atpG CMM_1168 - F0F1 ATP synthase subunit gamma 1171 67.42 -1 1335945..1337405 + 486 148272349 atpD CMM_1169 - F0F1 ATP synthase subunit beta 1172 70.37 0 1337407..1337676 + 89 148272350 atpC CMM_1170 - F0F1 ATP synthase subunit epsilon 1173 74.21 0 1337796..1338551 + 251 148272351 - CMM_1171 - hypothetical protein 1174 72.73 0 1338564..1339157 - 197 148272352 tag CMM_1172 - putative DNA-3-methyladenine glycosylase I 1175 76.56 0 1339154..1339618 - 154 148272353 ogtB CMM_1173 - putative methylated-DNA--protein-cysteine methyltransferase 1176 71.46 0 1339881..1340360 - 159 148272354 - CMM_1174 - AsnC family transcriptional regulator 1177 79.26 +1 1340590..1341780 + 396 148272355 - CMM_1175 - hypothetical protein 1178 74.79 0 1341777..1342613 + 278 148272356 - CMM_1176 - putative protein serine/threonine phosphatase 1179 74.17 0 1342644..1343642 - 332 148272357 dapD CMM_1177 - putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1180 73.77 0 1343723..1344820 + 365 148272358 dapE CMM_1178 - dipeptidase 1181 74.05 0 1344802..1346034 + 410 148272359 - CMM_1179 - hypothetical protein 1182 67.82 -1 1346182..1346355 + 57 148272360 - CMM_1180 - hypothetical protein 1183 74.25 0 1346465..1347097 - 210 148272361 - CMM_1181 - putative O-methyltransferase 1184 71.20 0 1347248..1347622 + 124 148272362 tatB CMM_1182 - putative sec-independent protein translocase protein, twin arginine pathway 1185 75.38 0 1347668..1348585 - 305 148272363 - CMM_1183 - LysR family transcriptional regulator 1186 71.70 0 1348665..1348823 + 52 148272364 - CMM_1184 - hypothetical protein 1187 75.85 0 1348915..1350090 - 391 148272365 - CMM_1185 - putative ATP-binding protein 1188 71.58 0 1350080..1350628 - 182 148272366 - CMM_1186 - hypothetical protein 1189 72.23 0 1350612..1351958 - 448 148272367 - CMM_1187 - Mg2+ transporter 1190 73.09 0 1352017..1352685 + 222 148272368 - CMM_1188 - hypothetical protein 1191 74.74 0 1352714..1354336 - 540 148272369 pepP2 CMM_1189 - putative Xaa-Pro aminopeptidase 1192 73.22 0 1354385..1355422 - 345 148272370 - CMM_1190 - putative membrane protein with hydrolase activity 1193 74.43 0 1355503..1356378 + 291 148272371 - CMM_1191 - hypothetical protein 1194 71.83 0 1356467..1357996 - 509 148272372 rhlE CMM_1192 - putative ATP-dependent RNA helicase 1195 73.62 0 1358104..1358865 + 253 148272373 - CMM_1193 - hypothetical protein 1196 74.65 0 1358947..1359234 - 95 148272374 - CMM_1194 - hypothetical protein 1197 69.33 0 1359244..1359468 - 74 148272375 - CMM_1195 - hypothetical protein 1198 76.94 +1 1359662..1362931 + 1089 148272376 uvrD1 CMM_1196 - putative ATP-dependant DNA helicase/nuclease 1199 74.76 0 1362928..1366203 + 1091 148272377 uvrD2 CMM_1197 - putative ATP-dependent DNA helicase 1200 73.26 0 1366116..1367192 - 358 148272378 - CMM_1198 - putative phosphotransferase 1201 74.74 0 1367328..1368281 + 317 148272379 - CMM_1199 - putative NTP pyrophosphohydrolase 1202 74.14 0 1368292..1370205 + 637 148272380 uvrD3 CMM_1200 - putative ATP-dependent DNA helicase 1203 77.36 +1 1370069..1370956 - 295 148272381 - CMM_1201 - hypothetical protein 1204 74.57 0 1371099..1372502 - 467 148272382 - CMM_1202 - hypothetical protein 1205 74.18 0 1372715..1373806 + 363 148272383 - CMM_1203 - ATP-dependant serine protease 1206 68.77 -1 1373947..1376898 + 983 148272384 - CMM_1204 - conseved membrane protein 1207 73.72 0 1377208..1377873 - 221 148272385 - CMM_1205 - putative peroxiredoxin 1208 73.29 0 1377992..1379713 - 573 148272386 - CMM_1206 - putative protein kinase 1209 75.92 0 1379710..1380282 - 190 148272387 - CMM_1207 - PadR family transcriptional regulator 1210 71.69 0 1380411..1381406 - 331 148272388 lipA CMM_1208 - lipoyl synthase 1211 73.93 0 1381403..1382104 - 233 148272389 lipB CMM_1209 - lipoyltransferase 1212 77.78 +1 1382208..1383107 + 299 148272390 - CMM_1210 - putative siderophore-interacting protein 1213 75.51 0 1383261..1383848 + 195 148272391 - CMM_1211 - hypothetical protein 1214 74.54 0 1383874..1384521 + 215 148272392 - CMM_1212 - hypothetical protein 1215 69.98 0 1384572..1385234 + 220 148272393 - CMM_1213 - hypothetical protein 1216 74.93 0 1385245..1385583 - 112 148272394 - CMM_1214 - hypothetical protein 1217 75.34 0 1386030..1389488 + 1152 148272395 - CMM_1215 - hypothetical protein 1218 76.54 0 1389546..1390244 - 232 148272396 - CMM_1216 - CDF family cation efflux protein 1219 75.42 0 1390241..1390594 - 117 148272397 - CMM_1217 - ArsR family transcriptional regulator 1220 75.11 0 1390705..1391142 + 145 148272398 - CMM_1218 - hypothetical protein 1221 78.31 +1 1391174..1391800 - 208 148272399 - CMM_1219 - TetR family transcriptional regulator 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0