version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 69 71.26 0 97673..98977 - 434 148271247 nhaA1 CMM_0069 - NahA family Na(+)/H(+) antiporter 70 73.37 0 99640..102741 - 1033 148271248 sbtA CMM_0070 - subtilisin-like serine protease 71 62.80 -2 103428..104384 - 318 148271249 ppaE CMM_0071 - hypothetical protein 72 61.81 -2 106123..106863 - 246 148271250 - CMM_0072 - hypothetical protein 73 57.11 -2 107334..108860 + 508 148271251 - CMM_0073 - putative acyl-CoA synthetase (AMP-forming) 74 61.71 -2 112168..112389 + 73 148271252 - CMM_0074 - hypothetical protein 75 62.97 -2 113031..114005 - 324 148271253 ppaD CMM_0075 - putative extracellular serine protease 76 62.00 -2 114879..115307 + 142 148271254 - CMM_0076 - hypothetical protein 77 66.67 -1 116970..117137 - 55 148271255 - CMM_0077 - hypothetical protein 78 72.15 0 117213..118871 + 552 148271256 - CMM_0078 - putative NADH oxidase 79 71.00 0 118888..119187 + 99 148271257 - CMM_0079 - hypothetical protein 80 64.78 -2 119184..119501 + 105 148271258 - CMM_0080 - hypothetical protein 81 64.02 -2 119736..120527 - 263 148271259 - CMM_0081 - putative short-chain dehydrogenase/reductase 82 66.46 -1 120538..122925 - 795 148271260 bglB CMM_0082 - putative beta-glucosidase 83 66.94 -1 123070..124908 - 612 148271261 bglC CMM_0083 - putative beta-glucosidase/beta-xylosidase 84 64.91 -1 124978..125889 - 303 148271262 - CMM_0084 - putative sugar ABC transporter, permease component 85 65.00 -1 125886..126968 - 360 148271263 - CMM_0085 - putative sugar ABC transporter, permease component 86 64.63 -2 127043..128320 - 425 148271264 - CMM_0086 - putative sugar ABC transporter, binding protein 87 67.20 -1 128542..129288 + 248 148271265 - CMM_0087 - TetR family transcriptional regulator 88 66.60 -1 129377..130822 - 481 148271266 bglA CMM_0088 - putative beta-glucosidase 89 66.76 -1 131048..132076 + 342 148271267 catR CMM_0089 - LacI family transcriptional regulator 90 64.52 -2 132170..133801 - 543 148271268 tomA CMM_0090 - tomatinase, endo-1,4-beta-glycosidase 91 66.82 -1 134140..134811 - 223 148271269 regB CMM_0091 - putative two-component system response regulator 92 68.48 -1 134808..135962 - 384 148271270 regA CMM_0092 - putative two-component system sensor kinase 93 68.55 -1 135959..138130 - 723 148271271 - CMM_0093 - RND family transporter 94 66.67 -1 138337..139557 + 406 148271272 cytA CMM_0094 - putative cytochrome P450 95 67.68 -1 139554..139751 + 65 148271273 cytB CMM_0095 - putative 3Fe-4S ferredoxin 96 67.83 -1 139748..140950 + 400 148271274 cytC CMM_0096 - putative ferredoxin reductase 97 68.15 -1 141009..143633 - 874 148271275 bglD CMM_0097 - glycosyl hydrolase family beta-glucosidase 98 67.26 -1 143748..144755 - 335 148271276 - CMM_0098 - LacI family transcriptional regulator 99 67.63 -1 144980..147469 + 829 148271277 bglE CMM_0099 - hypothetical protein 100 67.11 -1 147484..149739 + 751 148271278 bglF CMM_0100 - beta-galactosidase 101 64.19 -2 149904..151076 + 390 148271279 bglG CMM_0101 - beta-galactosidase 102 66.92 -1 151096..152694 + 532 148271280 bglH CMM_0102 - putative beta-galactosidase 103 67.06 -1 152728..154494 - 588 148271281 bglI CMM_0103 - beta-xylosidase glycosyl hydrolase family 43 104 66.52 -1 154629..156008 + 459 148271282 - CMM_0104 - sugar permease 105 64.91 -1 156005..158506 + 833 148271283 ramA CMM_0105 - putative alpha-rhamnosidase 106 67.56 -1 159396..161624 - 742 148271284 aglA CMM_0106 - alpha-xylosidase YicI 107 67.11 -1 161748..162659 - 303 148271285 - CMM_0107 - putative sugar ABC transporter, permease compound 108 67.60 -1 162659..163621 - 320 148271286 - CMM_0108 - putative sugar ABC transporter, permease component 109 67.92 -1 163695..165053 - 452 148271287 - CMM_0109 - putative sugar ABC transporter, binding protein 110 66.17 -1 165201..166802 + 533 148271288 - CMM_0110 - xylosidase glycosyl hydrolase family protein 111 71.38 0 166885..167691 + 268 148271289 - CMM_0111 - putative sugar phosphate isomerase/epimerase 112 74.05 0 167688..168797 + 369 148271290 - CMM_0112 - putative dehydrogenase/oxidoreductase 113 77.32 +1 168891..169622 + 243 148271291 - CMM_0113 - putative hydrolase 114 77.87 +1 169619..170332 + 237 148271292 - CMM_0114 - hypothetical protein 115 76.07 0 170415..171371 + 318 148271293 - CMM_0115 - hypothetical protein 116 74.62 0 171496..172086 + 196 148271294 - CMM_0116 - putative dienelactone hydrolase 117 73.20 0 172096..173580 - 494 148271295 - CMM_0117 - putative MFS-type efflux protein 118 72.69 0 173663..174409 + 248 148271296 - CMM_0118 - TetR family transcriptional regulator 119 75.72 0 174435..175130 - 231 148271297 - CMM_0119 - TetR family transcriptional regulator 120 74.76 0 175154..178837 - 1227 148271298 uahA CMM_0120 - putative urea amidolyase 121 69.99 0 178834..179526 - 230 148271299 - CMM_0121 - hypothetical protein 122 75.33 0 179523..180365 - 280 148271300 - CMM_0122 - hypothetical protein 123 71.78 0 180362..181945 - 527 148271301 - CMM_0123 - amino acid permease APC family 124 75.09 0 182195..185590 - 1131 148271302 - CMM_0124 - putative acyl-CoA synthetase 125 76.72 +1 185595..186320 - 241 148271303 - CMM_0125 - putative 4-phosphopantetheinyl transferase 126 77.74 +1 186504..187316 - 270 148271304 - CMM_0126 - hypothetical protein 127 74.46 0 187313..187864 - 183 148271305 sigX CMM_0127 - RNA polymerase ECF-subfamily sigma factor 128 74.40 0 188085..188795 + 236 148271306 - CMM_0128 - hypothetical protein 129 77.58 +1 188801..189469 + 222 148271307 - CMM_0129 - putative sortase 130 77.39 +1 189495..189755 - 86 148271308 - CMM_0130 - hypothetical protein 131 72.43 0 189769..190011 - 80 148271309 - CMM_0131 - hypothetical protein 132 72.68 0 190129..191409 - 426 148271310 - CMM_0132 - hypothetical protein 133 71.18 0 191551..192192 + 213 148271311 - CMM_0133 - putative pyroglutamylpeptidase 134 77.61 +1 192438..193625 + 395 148271312 - CMM_0134 - hypothetical protein 135 53.64 -2 193999..194973 - 324 148271313 - CMM_0135 - hypothetical protein 136 51.16 -2 194970..196007 - 345 148271314 - CMM_0136 - hypothetical protein 137 71.92 0 196333..197721 - 462 148271315 - CMM_0137 - putative MFS transporter 138 72.96 0 197794..198540 + 248 148271316 - CMM_0138 - hypothetical protein 139 74.22 0 198545..198928 - 127 148271317 - CMM_0139 - hypothetical protein 140 73.94 0 198943..199437 - 164 148271318 - CMM_0140 - hypothetical protein 141 70.87 0 199666..200331 + 221 148271319 - CMM_0141 - putative secreted protein 142 73.50 0 200413..201393 + 326 148271320 - CMM_0142 - hypothetical protein 143 70.58 0 201390..202232 + 280 148271321 - CMM_0143 - hypothetical protein 144 73.37 0 202285..203268 - 327 148271322 - CMM_0144 - hypothetical protein 145 69.55 0 203637..204329 - 230 148271323 - CMM_0145 - hypothetical protein 146 78.91 +1 204455..205099 - 214 148271324 - CMM_0146 - putative peptidase 147 75.99 0 205099..205731 - 210 148271325 - CMM_0147 - hypothetical protein 148 78.15 +1 205728..206537 - 269 148271326 - CMM_0148 - hypothetical protein 149 71.67 0 206653..207351 - 232 148271327 - CMM_0149 - hypothetical protein 150 74.95 0 207498..210902 - 1134 148271328 - CMM_0150 - putative cell wall surface anchor family protein 151 67.90 -1 211308..213179 + 623 148271329 dnaK CMM_0151 - molecular chaperone DnaK 152 71.87 0 213176..213829 + 217 148271330 grpE CMM_0152 - heat shock chaperone 153 73.27 0 213950..214963 + 337 148271331 dnaJ1 CMM_0153 - chaperone, curved DNA-binding protein 154 76.58 0 214965..215438 + 157 148271332 hspR CMM_0154 - heat shock transcriptional regulator 155 76.63 0 215435..216658 + 407 148271333 - CMM_0155 - putative methyltransferase 156 76.19 0 216711..217151 + 146 148271334 - CMM_0156 - hypothetical protein 157 71.73 0 217183..217419 - 78 148271335 - CMM_0157 - Cro/CI family transcriptional regulator 158 75.12 0 217419..218057 - 212 148271336 - CMM_0158 - hypothetical protein 159 71.14 0 218138..218584 - 148 148271337 - CMM_0159 - hypothetical protein 160 73.80 0 218974..219702 - 242 148271338 - CMM_0160 - hypothetical protein 161 76.00 0 219867..220895 - 342 148271339 - CMM_0161 - LacI family transcriptional regulator 162 73.56 0 221482..222105 - 207 148271340 - CMM_0162 - hypothetical protein 163 77.75 +1 222222..223250 + 342 148271341 - CMM_0163 - hypothetical protein 164 77.82 +1 223454..224224 + 256 148271342 - CMM_0164 - hypothetical protein 165 75.64 0 224275..225177 + 300 148271343 fhuC CMM_0165 - putative Fe3+-siderophore ABC transporter,ATPase component 166 71.62 0 225174..226163 + 329 148271344 fhuD CMM_0166 - putative Fe3+-siderophore ABC transporter,binding protein 167 77.93 +1 226198..228354 + 718 148271345 fhuB CMM_0167 - iron-hydroxamate transporter permease subunit 168 63.17 -2 228475..228960 + 161 148271346 - CMM_0167a - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.