version 1.0
Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome - 1..3297891 2984 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1082 74.79 0 1237705..1239600 + 631 148272260 - CMM_1080 - hypothetical protein 1083 76.54 0 1239603..1241030 + 475 148272261 - CMM_1081 - hypothetical protein 1084 74.92 0 1241105..1241407 - 100 148272262 - CMM_1082 - putative monooxygenase 1085 71.35 0 1241582..1242457 - 291 148272263 - CMM_1083 - hypothetical protein 1086 79.03 +1 1242606..1243430 + 274 148272264 - CMM_1084 - putative sugar kinase 1087 70.61 0 1243531..1245126 + 531 148272265 otsA CMM_1085 - putative trehalose-phosphate synthase 1088 74.03 0 1245132..1245959 + 275 148272266 otsB CMM_1086 - putative trehalose-phosphatase 1089 73.35 0 1246033..1249041 + 1002 148272267 mnhAB CMM_1087 - putative monovalent cation/H+ antiporter subunit A 1090 68.27 -1 1249038..1249598 + 186 148272268 mnhC CMM_1088 - putative Na+/H+ antiporter subunit 1091 69.11 0 1249595..1251187 + 530 148272269 mnhD CMM_1089 - putative monovalent cation/H+ antiporter subunit D 1092 71.41 0 1251184..1251858 + 224 148272270 mnhE CMM_1090 - putative monovalent cation/H+ antiporter subunit E 1093 67.39 -1 1251855..1252130 + 91 148272271 mnhF CMM_1091 - putative multisubunit Na+/H+ antiporter, NADH-quinone dehydrogenase 1094 75.57 0 1252127..1252699 + 190 148272272 mnhG CMM_1092 - putative multisubunit Na+/H+ antiporter, NADH-quinone dehydrogenase 1095 70.21 0 1252765..1254459 + 564 148272273 ilvD CMM_1093 - dihydroxy-acid dehydratase 1096 70.28 0 1254456..1256339 + 627 148272274 ilvB CMM_1094 - acetolactate synthase 1 catalytic subunit 1097 68.24 -1 1256336..1256845 + 169 148272275 ilvH CMM_1095 - acetolactate synthase 3 regulatory subunit 1098 69.49 0 1257014..1258039 + 341 148272276 ilvC CMM_1096 - ketol-acid reductoisomerase 1099 79.03 +1 1258173..1258706 + 177 148272277 - CMM_1097 - hypothetical protein 1100 78.32 +1 1258703..1259071 + 122 148272278 - CMM_1098 - hypothetical protein 1101 73.13 0 1259081..1259482 - 133 148272279 - CMM_1099 - hypothetical protein 1102 70.44 0 1259548..1261137 + 529 148272280 serA CMM_1100 - D-3-phosphoglycerate dehydrogenase 1103 76.44 0 1261216..1261839 - 207 148272281 - CMM_1101 - TetR family transcriptional regulator 1104 72.89 0 1261961..1263502 + 513 148272282 - CMM_1102 - putative efflux MFS permease 1105 70.59 0 1263580..1263834 - 84 148272283 - CMM_1103 - hypothetical protein 1106 73.03 0 1263947..1265014 + 355 148272284 leuB CMM_1104 - 3-isopropylmalate dehydrogenase 1107 72.06 0 1265023..1266153 + 376 148272285 ilvE CMM_1105 - branched-chain amino acid aminotransferase 1108 71.83 0 1266211..1266984 + 257 148272286 - CMM_1106 - hypothetical protein 1109 76.94 +1 1266987..1267745 + 252 148272287 - CMM_1107 - hypothetical protein 1110 71.20 0 1267759..1269279 + 506 148272288 gltX CMM_1108 - glutamyl-tRNA synthetase 1111 73.29 0 1269272..1270222 + 316 148272289 trxB2 CMM_1109 - putative thioredoxin reductase 1112 58.10 -2 1270661..1274278 + 1205 148272290 - CMM_1110 - hypothetical protein 1113 68.40 -1 1274459..1274689 + 76 148272291 - CMM_1111 - hypothetical protein 1114 67.66 -1 1274834..1275844 - 336 148272292 - CMM_1112 - putative K+ channel protein, beta subunit 1115 67.36 -1 1275979..1276989 - 336 148272293 - CMM_1113 - putative potassium channel protein subunit 1116 74.31 0 1277057..1277671 - 204 148272294 - CMM_1114 - TetR family transcriptional regulator 1117 75.81 0 1277727..1278524 + 265 148272295 - CMM_1115 - putative short chain dehydrogenase 1118 66.49 -1 1278593..1279696 - 367 148272296 - CMM_1116 - TerC family membrane protein 1119 74.82 0 1279936..1280352 - 138 148272297 - CMM_1117 - hypothetical protein 1120 68.86 0 1280395..1281033 - 212 148272298 - CMM_1118 - putative Zn-dependant hydrolase 1121 74.76 0 1281390..1282106 + 238 148272299 - CMM_1119 - S51 family peptidase 1122 76.27 0 1282117..1282803 + 228 148272300 ungA CMM_1120 - uracil-DNA glycosylase 1123 73.19 0 1282857..1283546 + 229 148272301 - CMM_1121 - putative acetyltransferase 1124 70.95 0 1283428..1284360 - 310 148272302 - CMM_1122 - putative membrane bound protease 1125 71.47 0 1286708..1287331 - 207 148272303 sgaH CMM_1123 - putative hexulose-6-phosphate synthase 1126 75.53 0 1287384..1287992 - 202 148272304 - CMM_1124 - putative 6-phospho-3-hexuloisomerase 1127 77.52 +1 1288259..1289437 + 392 148272305 - CMM_1125 - LuxR family transcriptional regulator 1128 72.91 0 1289562..1291709 + 715 148272306 - CMM_1126 - putative 5'-nucleotidase 1129 75.77 0 1291820..1293247 + 475 148272307 - CMM_1127 - putative Asp/Glu-tRNA amidotransferase 1130 74.25 0 1293257..1293994 - 245 148272308 - CMM_1128 - hypothetical protein 1131 74.32 0 1294075..1295067 + 330 148272309 - CMM_1129 - putative siderophore-interacting protein 1132 74.86 0 1295500..1296378 - 292 148272310 - CMM_1130 - putative short chain alcohol dehydrogenase 1133 74.81 0 1296375..1296767 - 130 148272311 - CMM_1131 - hypothetical protein 1134 74.34 0 1296764..1298197 - 477 148272312 - CMM_1132 - putative pyridine nucleotide-disulphide oxidoreductase 1135 77.50 +1 1298254..1299093 - 279 148272313 echA CMM_1133 - enoyl-CoA hydratase 1136 76.04 0 1299162..1300004 - 280 148272314 - CMM_1134 - hypothetical protein 1137 70.05 0 1300110..1300760 - 216 148272315 - CMM_1135 - putative F420-dependent NADP reductase 1138 68.95 0 1300855..1301598 - 247 148272316 - CMM_1136 - hypothetical protein 1139 75.28 0 1301683..1303725 - 680 148272317 - CMM_1137 - hypothetical protein 1140 77.46 +1 1303814..1304239 - 141 148272318 - CMM_1138 - hypothetical protein 1141 75.00 0 1304368..1304679 - 103 148272319 - CMM_1139 - hypothetical protein 1142 74.49 0 1305414..1306103 + 229 148272320 - CMM_1140 - putative pyridoxamine-phosphate oxidase 1143 77.43 +1 1306214..1306984 + 256 148272321 - CMM_1141 - putative glutamine amidotransferase 1144 74.47 0 1307034..1307789 - 251 148272322 - CMM_1142 - putative short chain alcohol dehydrogenase 1145 76.95 +1 1307786..1308553 - 255 148272323 - CMM_1143 - putative short chain alcohol dehydrogenase 1146 71.65 0 1308550..1309935 - 461 148272324 - CMM_1144 - putative MFS permease 1147 68.91 0 1309970..1310860 - 296 148272325 - CMM_1145 - putative deacetylase 1148 77.97 +1 1310886..1311911 - 341 148272326 - CMM_1146 - putative asparaginase 1149 74.93 0 1312083..1313111 + 342 148272327 - CMM_1147 - LacI family transcriptional regulator 1150 74.59 0 1313187..1313981 + 264 148272328 - CMM_1148 - hypothetical protein 1151 75.46 0 1314009..1314656 - 215 148272329 - CMM_1149 - hypothetical protein 1152 71.59 0 1314856..1316520 + 554 148272330 argS CMM_1150 - arginyl-tRNA synthetase 1153 71.31 0 1316632..1317363 + 243 148272331 - CMM_1151 - hypothetical protein 1154 74.93 0 1317520..1319019 + 499 148272332 lysA CMM_1152 - hypothetical protein 1155 74.02 0 1319016..1320347 + 443 148272333 thrA CMM_1153 - homoserine dehydrogenase 1156 71.03 0 1320347..1321423 + 358 148272334 thrC CMM_1154 - threonine synthase 1157 74.55 0 1321435..1322385 + 316 148272335 thrB CMM_1155 - homoserine kinase 1158 75.08 0 1322682..1325153 + 823 148272336 - CMM_1156 - transcription termination factor Rho 1159 70.93 0 1325159..1326238 + 359 148272337 prfA CMM_1157 - peptide chain release factor 1 1160 77.51 +1 1326263..1327138 + 291 148272338 - CMM_1158 - putative methylase of peptide chain release factors 1161 75.69 0 1327166..1327819 - 217 148272339 - CMM_1159 - hypothetical protein 1162 76.45 0 1327903..1328832 + 309 148272340 - CMM_1160 - hypothetical protein 1163 70.30 0 1328829..1330148 + 439 148272341 rfeA CMM_1161 - putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 1164 69.00 0 1330145..1330615 + 156 148272342 - CMM_1162 - hypothetical protein 1165 64.31 -2 1330770..1331618 + 282 148272343 atpB CMM_1163 - F0F1 ATP synthase subunit A 1166 67.09 -1 1331665..1331898 + 77 148272344 atpE CMM_1164 - ATP synthase C chain (Lipid-binding protein) 1167 71.78 0 1331910..1332476 + 188 148272345 atpF CMM_1165 - F0F1 ATP synthase subunit B 1168 72.35 0 1332476..1333267 + 263 148272346 atpH CMM_1166 - F0F1 ATP synthase subunit delta 1169 67.89 -1 1333323..1334960 + 545 148272347 atpA CMM_1167 - F0F1 ATP synthase subunit alpha 1170 67.89 -1 1335010..1335909 + 299 148272348 atpG CMM_1168 - F0F1 ATP synthase subunit gamma 1171 67.42 -1 1335945..1337405 + 486 148272349 atpD CMM_1169 - F0F1 ATP synthase subunit beta 1172 70.37 0 1337407..1337676 + 89 148272350 atpC CMM_1170 - F0F1 ATP synthase subunit epsilon 1173 74.21 0 1337796..1338551 + 251 148272351 - CMM_1171 - hypothetical protein 1174 72.73 0 1338564..1339157 - 197 148272352 tag CMM_1172 - putative DNA-3-methyladenine glycosylase I 1175 76.56 0 1339154..1339618 - 154 148272353 ogtB CMM_1173 - putative methylated-DNA--protein-cysteine methyltransferase 1176 71.46 0 1339881..1340360 - 159 148272354 - CMM_1174 - AsnC family transcriptional regulator 1177 79.26 +1 1340590..1341780 + 396 148272355 - CMM_1175 - hypothetical protein 1178 74.79 0 1341777..1342613 + 278 148272356 - CMM_1176 - putative protein serine/threonine phosphatase 1179 74.17 0 1342644..1343642 - 332 148272357 dapD CMM_1177 - putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1180 73.77 0 1343723..1344820 + 365 148272358 dapE CMM_1178 - dipeptidase 1181 74.05 0 1344802..1346034 + 410 148272359 - CMM_1179 - hypothetical protein 72.78 MEAN 3.94 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0