version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 946 30.38 0 1135239..1135577 + 112 150015838 - Cbei_0952 - phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit 947 29.81 0 1135777..1138476 + 899 150015839 - Cbei_0953 - sigma-54 factor interaction domain-containing protein 948 27.50 0 1138631..1141405 + 924 150015840 - Cbei_0954 - sigma-54 factor interaction domain-containing protein 949 28.61 0 1141528..1141950 + 140 150015841 - Cbei_0955 - PTS system fructose subfamily IIA component 950 29.51 0 1141965..1142435 + 156 150015842 - Cbei_0956 - PTS system sorbose subfamily IIB component 951 35.42 +1 1142450..1143214 + 254 150015843 - Cbei_0957 - phosphotransferase system PTS, sorbose-specific IIC subunit 952 31.43 0 1143201..1144040 + 279 150015844 - Cbei_0958 - PTS system mannose/fructose/sorbose family IID component 953 30.73 0 1144108..1145106 + 332 150015845 - Cbei_0959 - sugar isomerase (SIS) 954 30.90 0 1145178..1146041 + 287 150015846 - Cbei_0960 - ribokinase-like domain-containing protein 955 26.67 -1 1146248..1147117 - 289 150015847 - Cbei_0961 - phosphotransferase domain-containing protein 956 28.33 0 1147542..1150301 + 919 150015848 - Cbei_0962 - sigma-54 factor interaction domain-containing protein 957 26.08 -1 1150413..1150853 + 146 150015849 - Cbei_0963 - PTS system fructose subfamily IIA component 958 31.04 0 1150831..1151310 + 159 150015850 - Cbei_0964 - PTS system sorbose subfamily IIB component 959 34.97 +1 1151329..1152120 + 263 150015851 - Cbei_0965 - phosphotransferase system PTS, sorbose-specific IIC subunit 960 31.96 0 1152113..1152913 + 266 150015852 - Cbei_0966 - PTS system mannose/fructose/sorbose family IID component 961 29.36 0 1152942..1153997 + 351 150015853 - Cbei_0967 - sugar isomerase (SIS) 962 25.90 -1 1154253..1155731 - 492 150015854 - Cbei_0968 - polysaccharide biosynthesis protein 963 25.03 -1 1155912..1156778 + 288 150015855 - Cbei_0969 - helix-turn-helix domain-containing protein 964 26.88 -1 1156951..1159167 - 738 150015856 - Cbei_0970 - peptidase M56, BlaR1 965 25.51 -1 1159314..1159709 - 131 150015857 - Cbei_0971 - CopY family transcriptional regulator 966 28.61 0 1160005..1162944 + 979 150015858 - Cbei_0972 - non-specific serine/threonine protein kinase 967 29.30 0 1163230..1164096 - 288 150015859 - Cbei_0973 - RpiR family transcriptional regulator 968 28.74 0 1164671..1165498 + 275 150015860 - Cbei_0974 - Cof-like hydrolase 969 27.48 0 1165539..1166324 + 261 150015861 - Cbei_0975 - HisJ family histidinol phosphate phosphatase 970 31.58 0 1166565..1167077 + 170 150015862 - Cbei_0976 - GCN5-related N-acetyltransferase 971 33.17 0 1167177..1168412 - 411 150015863 - Cbei_0977 - major facilitator transporter 972 30.79 0 1168583..1170037 + 484 150015864 - Cbei_0978 - major facilitator transporter 973 32.24 0 1170378..1170926 - 182 150015865 - Cbei_0979 - hypothetical protein 974 33.58 0 1171205..1172434 + 409 150015866 - Cbei_0980 - nuclease SbcCD, D subunit 975 27.89 0 1172409..1175900 + 1163 150015867 - Cbei_0981 - SMC domain-containing protein 976 30.88 0 1176228..1176797 + 189 150015868 - Cbei_0982 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 977 30.32 0 1177109..1178836 + 575 150015869 - Cbei_0983 - phosphoglucomutase/phosphomannomutase alpha/beta/subunit 978 27.88 0 1179374..1180474 + 366 150015870 - Cbei_0984 - TPR repeat-containing protein 979 28.10 0 1180597..1181322 + 241 150015871 - Cbei_0985 - WecB/TagA/CpsF family glycosyl transferase 980 28.42 0 1181367..1182893 + 508 150015872 - Cbei_0986 - integral membrane protein MviN 981 27.60 0 1182905..1184194 + 429 150015873 - Cbei_0987 - hypothetical protein 982 29.55 0 1184195..1185358 + 387 150015874 - Cbei_0988 - glycosyl transferase, group 1 983 27.94 0 1185342..1186565 + 407 150015875 - Cbei_0989 - O-antigen polymerase 984 29.95 0 1186622..1187272 + 216 150015876 - Cbei_0990 - formiminotransferase-cyclodeaminase 985 39.87 +2 1187348..1187500 - 50 150015877 - Cbei_0991 - hypothetical protein 986 26.10 -1 1187743..1188240 + 165 150015878 - Cbei_0992 - hypothetical protein 987 32.77 0 1188496..1189383 - 295 150015879 - Cbei_0993 - Delta-lactam-biosynthetic de-N-acetylase 988 32.06 0 1189944..1191041 + 365 150015880 - Cbei_0994 - translation-associated GTPase 989 28.34 0 1191495..1193315 + 606 150015881 - Cbei_0995 - TPR repeat-containing protein 990 30.37 0 1193384..1194361 + 325 150015882 - Cbei_0996 - mannose-6-phosphate isomerase, class I 991 30.89 0 1194692..1195552 + 286 150015883 - Cbei_0997 - undecaprenyl pyrophosphate phosphatase 992 32.51 0 1196228..1197325 + 365 150015884 - Cbei_0998 - 6-phosphofructokinase 993 29.34 0 1197420..1198196 + 258 150015885 - Cbei_0999 - beta-lactamase, putative 994 31.72 0 1198499..1199425 + 308 150015886 pyrB Cbei_1000 - aspartate carbamoyltransferase catalytic subunit 995 30.79 0 1199427..1199858 + 143 150015887 - Cbei_1001 - aspartate carbamoyltransferase regulatory subunit 996 34.30 +1 1199878..1201113 + 411 150015888 - Cbei_1002 - dihydroorotase, multifunctional complex type 997 33.79 0 1201509..1202381 + 290 150015889 pyrF Cbei_1003 - orotidine 5'-phosphate decarboxylase 998 31.45 0 1202417..1203160 + 247 150015890 - Cbei_1004 - dihydroorotate dehydrogenase electron transfer subunit 999 35.12 +1 1203182..1204078 + 298 150015891 - Cbei_1005 - dihydroorotate dehydrogenase 1B 1000 31.85 0 1204170..1204844 + 224 150015892 pyrE Cbei_1006 - orotate phosphoribosyltransferase 1001 31.63 0 1205539..1206300 + 253 150015893 - Cbei_1007 - stationary-phase survival protein SurE 1002 28.78 0 1206333..1207715 - 460 150015894 - Cbei_1008 - hypothetical protein 1003 32.75 0 1208359..1210590 + 743 150015895 - Cbei_1009 - formate acetyltransferase 1004 31.40 0 1210933..1211658 + 241 150015896 - Cbei_1010 - pyruvate formate-lyase activating enzyme 1005 33.15 0 1212099..1214330 + 743 150015897 - Cbei_1011 - formate acetyltransferase 1006 32.72 0 1214565..1214726 - 53 150015898 - Cbei_1012 - rubredoxin-type Fe(Cys)4 protein 1007 31.27 0 1214887..1215516 - 209 150015899 - Cbei_1013 - exonuclease, RNase T and DNA polymerase III 1008 31.86 0 1215791..1216741 + 316 150015900 - Cbei_1014 - L-lactate dehydrogenase 1009 29.53 0 1217500..1218471 - 323 150015901 - Cbei_1015 - biotin--acetyl-CoA-carboxylase ligase 1010 32.40 0 1218621..1219691 + 356 150015902 - Cbei_1016 - hypothetical protein 1011 29.61 0 1219712..1220758 + 348 150015903 - Cbei_1017 - hypothetical protein 1012 31.15 0 1221242..1221883 + 213 150015904 - Cbei_1018 - peptidase M50 1013 31.62 0 1222399..1224090 + 563 150015905 argS Cbei_1019 - arginyl-tRNA synthetase 1014 28.88 0 1224308..1225453 + 381 150015906 - Cbei_1020 - hypothetical protein 1015 30.17 0 1225483..1226019 + 178 150015907 - Cbei_1021 - nitroreductase 1016 29.77 0 1226281..1227009 + 242 150015908 - Cbei_1022 - HAD family hydrolase 1017 25.60 -1 1227024..1227773 + 249 150015909 - Cbei_1023 - hypothetical protein 1018 28.00 0 1227930..1228811 - 293 150015910 - Cbei_1024 - beta-lactamase domain-containing protein 1019 31.23 0 1229158..1230960 + 600 150015911 - Cbei_1025 - hypothetical protein 1020 25.96 -1 1231155..1231913 - 252 150015912 - Cbei_1026 - hypothetical protein 1021 25.87 -1 1232133..1232333 - 66 150015913 - Cbei_1027 - hypothetical protein 1022 27.18 -1 1232408..1232878 - 156 150015914 - Cbei_1028 - AsnC family transcriptional regulator 1023 28.66 0 1233126..1233446 + 106 150015915 - Cbei_1029 - hypothetical protein 1024 29.08 0 1233655..1234665 - 336 150015916 - Cbei_1030 - hypothetical protein 1025 30.47 0 1234792..1235349 + 185 150015917 - Cbei_1031 - carbonic anhydrase 1026 30.23 0 1235558..1236394 + 278 150015918 - Cbei_1032 - RNA-binding S1 domain-containing protein 1027 30.72 0 1236450..1237865 - 471 150015919 - Cbei_1033 - GerA spore germination protein 1028 33.01 0 1238543..1240387 + 614 150015920 - Cbei_1034 - asparagine synthase (glutamine-hydrolyzing) 1029 23.10 -2 1240528..1240830 - 100 150015921 - Cbei_1035 - hypothetical protein 1030 32.76 0 1240986..1243598 - 870 150015922 - Cbei_1036 - ATPase, P-type (transporting), HAD superfamily, subfamily IC 1031 29.52 0 1243915..1244334 + 139 150015923 - Cbei_1037 - hypothetical protein 1032 29.83 0 1245010..1246008 + 332 150015924 - Cbei_1038 - putative sulfonate/nitrate transport system substrate-binding protein 1033 29.10 0 1245983..1246738 + 251 150015925 - Cbei_1039 - binding-protein-dependent transport systems inner membrane component 1034 27.20 -1 1246735..1247403 + 222 150015926 - Cbei_1040 - ABC transporter related 1035 30.64 0 1247790..1249496 + 568 150015927 - Cbei_1041 - ABC transporter related 1036 30.56 0 1249548..1249979 - 143 150015928 - Cbei_1042 - hypothetical protein 1037 34.01 +1 1250410..1251438 - 342 150015929 - Cbei_1043 - branched-chain amino acid aminotransferase 1038 31.70 0 1251799..1253697 - 632 150015930 - Cbei_1044 - NAD+ synthetase 1039 32.41 0 1254015..1254446 + 143 150015931 - Cbei_1045 - hypothetical protein 1040 30.59 0 1254450..1255397 + 315 150015932 - Cbei_1046 - band 7 protein 1041 26.25 -1 1255762..1256580 + 272 150015933 - Cbei_1047 - hypothetical protein 1042 26.55 -1 1256690..1257205 + 171 150015934 - Cbei_1048 - hypothetical protein 1043 30.46 0 1257354..1258187 + 277 150015935 - Cbei_1049 - extracellular solute-binding protein 1044 31.46 0 1258251..1258892 + 213 150015936 - Cbei_1050 - polar amino acid ABC transporter, inner membrane subunit 1045 31.44 0 1258908..1259594 + 228 150015937 - Cbei_1051 - ABC transporter related 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0