version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 436 28.07 0 531394..531564 + 56 150015328 - Cbei_0438 - hypothetical protein 437 32.46 0 531720..533897 + 725 150015329 - Cbei_0439 - RNA-binding S1 domain-containing protein 438 31.35 0 534155..535111 + 318 150015330 - Cbei_0440 - oxidoreductase domain-containing protein 439 29.35 0 535137..536090 + 317 150015331 - Cbei_0441 - hypothetical protein 440 26.10 -1 536187..537167 + 326 150015332 - Cbei_0442 - helix-turn-helix domain-containing protein 441 31.66 0 537514..538407 + 297 150015333 - Cbei_0443 - ROK family protein 442 34.10 +1 538563..540656 - 697 150015334 - Cbei_0444 - glutamine synthetase, catalytic region 443 30.84 0 541381..542784 + 467 150015335 - Cbei_0445 - rhamnulokinase 444 32.22 0 542921..544177 + 418 150015336 - Cbei_0446 - L-rhamnose isomerase 445 32.02 0 544306..545142 + 278 150015337 - Cbei_0447 - 5-keto-4-deoxyuronate isomerase 446 35.12 +1 545167..545949 + 260 150015338 - Cbei_0448 - 2-deoxy-D-gluconate 3-dehydrogenase 447 31.91 0 546348..547475 - 375 150015339 - Cbei_0449 - glycosy hydrolase family protein 448 28.79 0 547974..548810 + 278 150015340 - Cbei_0450 - xylose isomerase domain-containing protein 449 32.75 0 549399..550937 + 512 150015341 - Cbei_0451 - oligogalacturonide transporter 450 28.57 0 551096..551410 - 104 150015342 - Cbei_0452 - L-rhamnose 1-epimerase 451 30.30 0 551646..552404 + 252 150015343 - Cbei_0453 - DeoR family transcriptional regulator 452 32.36 0 552776..553594 + 272 150015344 - Cbei_0454 - rhamnulose-1-phosphate aldolase 453 34.54 +1 553934..555091 + 385 150015345 - Cbei_0455 - L-1,2-propanediol oxidoreductase 454 33.12 0 555541..556008 + 155 150015346 - Cbei_0456 - methylated-DNA--protein-cysteine methyltransferase 455 27.18 -1 556310..556927 + 205 150015347 - Cbei_0457 - DeoR family transcriptional regulator 456 28.66 0 557059..557871 + 270 150015348 - Cbei_0458 - Cof-like hydrolase 457 28.40 0 558114..558923 - 269 150015349 - Cbei_0459 - regulatory protein, IclR 458 36.02 +1 559167..559949 + 260 150015350 - Cbei_0460 - 2-deoxy-D-gluconate 3-dehydrogenase 459 31.65 0 560086..561033 + 315 150015351 - Cbei_0461 - ribokinase-like domain-containing protein 460 31.42 0 561123..561749 + 208 150015352 - Cbei_0462 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 461 25.13 -1 562066..562455 + 129 150015353 - Cbei_0463 - hemerythrin-like metal-binding protein 462 32.82 0 562927..563508 + 193 150015354 - Cbei_0464 - hypothetical protein 463 35.80 +1 564288..564449 + 53 150015355 - Cbei_0465 - rubredoxin-type Fe(Cys)4 protein 464 27.32 -1 564646..565410 + 254 150015356 - Cbei_0466 - DeoR family transcriptional regulator 465 32.20 0 565563..566003 - 146 150015357 - Cbei_0467 - ribosomal-protein-alanine acetyltransferase 466 31.56 0 566003..566737 - 244 150015358 - Cbei_0468 - peptidase M22, glycoprotease 467 29.00 0 566734..567195 - 153 150015359 - Cbei_0469 - hypothetical protein 468 25.25 -1 567643..568545 + 300 150015360 - Cbei_0470 - periplasmic solute binding protein 469 32.81 0 569016..569396 + 126 150015361 - Cbei_0471 - putative endoribonuclease L-PSP 470 33.33 0 569494..570561 - 355 150015362 - Cbei_0472 - 2-nitropropane dioxygenase, NPD 471 23.70 -2 571244..572260 + 338 150015363 - Cbei_0473 - hypothetical protein 472 35.94 +1 572475..572666 + 63 150015364 - Cbei_0474 - small acid-soluble spore protein, alpha/beta type 473 28.48 0 572898..574031 + 377 150015365 - Cbei_0475 - metallophosphoesterase 474 25.26 -1 574133..576868 + 911 150015366 - Cbei_0476 - hypothetical protein 475 31.88 0 576978..577874 + 298 150015367 - Cbei_0477 - periplasmic solute binding protein 476 27.86 0 578373..580163 + 596 150015368 - Cbei_0478 - DNA mismatch repair protein MutS domain-containing protein 477 26.86 -1 580211..581122 + 303 150015369 - Cbei_0479 - exonuclease, RNase T and DNA polymerase III 478 27.56 0 581241..581690 + 149 150015370 - Cbei_0480 - CBS domain-containing protein 479 29.39 0 581877..582536 - 219 150015371 - Cbei_0481 - hypothetical protein 480 29.80 0 582547..583197 - 216 150015372 - Cbei_0482 - phage shock protein A, PspA 481 30.38 0 583219..583896 - 225 150015373 - Cbei_0483 - hypothetical protein 482 31.17 0 584264..585418 + 384 150015374 rpsA Cbei_0484 - 30S ribosomal protein S1 483 33.54 0 585491..586909 - 472 150015375 - Cbei_0485 - pyruvate kinase 484 31.07 0 587073..588530 + 485 150015376 - Cbei_0486 - aminoacyl-histidine dipeptidase 485 31.14 0 588897..589490 + 197 150015377 - Cbei_0487 - NLP/P60 protein 486 31.56 0 589833..590507 + 224 150015378 - Cbei_0488 - hypothetical protein 487 31.92 0 590802..591368 + 188 150015379 - Cbei_0489 - Maf-like protein 488 30.43 0 591420..592109 + 229 150015380 radC Cbei_0490 - DNA repair protein RadC 489 35.00 +1 592130..593146 + 338 150015381 - Cbei_0491 - cell shape determining protein MreB 490 30.51 0 593149..593997 + 282 150015382 - Cbei_0492 - rod shape-determining protein MreC 491 27.44 0 594007..594498 + 163 150015383 - Cbei_0493 - rod shape-determining protein MreD 492 31.54 0 594495..597392 + 965 150015384 - Cbei_0494 - penicillin-binding protein, transpeptidase 493 29.81 0 597550..598230 + 226 150015385 - Cbei_0495 - sugar fermentation stimulation protein A 494 29.85 0 598430..599089 + 219 150015386 minC Cbei_0496 - septum formation inhibitor 495 32.33 0 599110..599910 + 266 150015387 - Cbei_0497 - septum site-determining protein MinD 496 29.26 0 599925..600194 + 89 150015388 - Cbei_0498 - cell division topological specificity factor MinE 497 32.63 0 600464..601594 + 376 150015389 - Cbei_0499 - cell cycle protein 498 28.30 0 602012..602488 + 158 150015390 - Cbei_0500 - hypothetical protein 499 24.13 -2 602608..603465 + 285 150015391 - Cbei_0501 - peptidase M50 500 26.33 -1 603663..604262 + 199 150015392 - Cbei_0502 - hypothetical protein 501 28.60 0 604514..606604 + 696 150015393 - Cbei_0503 - S-layer domain-containing protein 502 25.59 -1 606771..611006 + 1411 150015394 - Cbei_0504 - hypothetical protein 503 31.45 0 611267..613123 + 618 150015395 - Cbei_0505 - radical SAM domain-containing protein 504 30.77 0 613107..613808 + 233 150015396 - Cbei_0506 - hypothetical protein 505 27.61 0 613999..615447 + 482 150015397 - Cbei_0507 - ribonuclease 506 37.82 +2 615623..615934 + 103 150015398 rplU Cbei_0508 - 50S ribosomal protein L21 507 28.17 0 615942..616328 + 128 150015399 - Cbei_0509 - hypothetical protein 508 35.00 +1 616333..616632 + 99 150015400 rpmA Cbei_0510 - 50S ribosomal protein L27 509 32.48 0 616934..618226 + 430 150015401 obgE Cbei_0511 - GTPase ObgE 510 26.07 -1 618374..618676 + 100 150015402 - Cbei_0512 - hypothetical protein 511 30.89 0 618839..619453 + 204 150015403 nadD Cbei_0513 - nicotinic acid mononucleotide adenylyltransferase 512 29.88 0 619540..620118 + 192 150015404 - Cbei_0514 - metal dependent phosphohydrolase 513 28.62 0 620218..621510 + 430 150015405 - Cbei_0515 - cell envelope-related transcriptional attenuator 514 31.33 0 621712..622611 + 299 150015406 - Cbei_0516 - RluA family pseudouridine synthase 515 30.26 0 622686..623660 - 324 150015407 - Cbei_0517 - LysR family transcriptional regulator 516 34.53 +1 623704..624789 + 361 150015408 - Cbei_0518 - aspartate-semialdehyde dehydrogenase 517 31.55 0 624853..626088 - 411 150015409 - Cbei_0519 - Serine-type D-Ala-D-Ala carboxypeptidase 518 26.20 -1 626254..626940 + 228 150015410 - Cbei_0520 - helix-hairpin-helix repeat-containing competence protein ComEA 519 28.72 0 627218..627910 + 230 150015411 - Cbei_0521 - hypothetical protein 520 26.32 -1 627931..628329 + 132 150015412 - Cbei_0522 - hypothetical protein 521 31.27 0 628440..629798 + 452 150015413 - Cbei_0523 - RNA methyltransferase 522 29.04 0 630782..632806 + 674 150015414 - Cbei_0524 - transcriptional antiterminator, BglG 523 31.47 0 632825..633253 + 142 150015415 - Cbei_0525 - putative PTS IIA-like nitrogen-regulatory protein PtsN 524 30.17 0 633247..634005 + 252 150015416 frcK Cbei_0526 - putative fructose transport system kinase 525 34.65 +1 634005..635450 + 481 150015417 - Cbei_0527 - PTS system, mannitol-specific IIC subunit 526 34.38 +1 635472..636719 + 415 150015418 - Cbei_0528 - alcohol dehydrogenase 527 30.08 0 636881..637588 + 235 150015419 - Cbei_0529 - ribulose-phosphate 3-epimerase 528 33.87 +1 637590..638150 + 186 150015420 - Cbei_0530 - sugar isomerase (SIS) 529 27.66 0 638171..639352 + 393 150015421 - Cbei_0531 - mannitol dehydrogenase domain-containing protein 530 35.64 +1 640021..642012 + 663 150015422 - Cbei_0532 - transketolase 531 28.57 0 642299..642466 + 55 150015423 - Cbei_0533 - recombinase 532 34.66 +1 642607..643284 + 225 150015424 - Cbei_0534 - two component transcriptional regulator 533 31.66 0 643281..644354 + 357 150015425 - Cbei_0535 - integral membrane sensor signal transduction histidine kinase 534 33.84 0 644608..645987 + 459 150015426 - Cbei_0536 - MATE efflux family protein 535 31.15 0 646716..647081 + 121 150015427 - Cbei_0537 - response regulator receiver protein 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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