version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 394 32.13 0 484252..484668 + 138 150015286 - Cbei_0396 - hypothetical protein 395 21.68 -2 484774..485082 + 102 150015287 - Cbei_0397 - hypothetical protein 396 32.59 0 485247..486857 + 536 150015288 - Cbei_0398 - CTP synthetase 397 30.63 0 487168..488610 + 480 150015289 rho Cbei_0399 - transcription termination factor Rho 398 27.55 0 488651..489757 - 368 150015290 - Cbei_0400 - monogalactosyldiacylglycerol synthase 399 37.14 +2 489971..490180 - 69 150015291 - Cbei_0401 - 50S ribosomal protein L31 400 29.06 0 490370..490954 + 194 150015292 - Cbei_0402 - thymidine kinase 401 31.12 0 490980..492740 + 586 150015293 - Cbei_0403 - HemK family modification methylase 402 32.59 0 492876..493958 + 360 150015294 prfA Cbei_0404 - peptide chain release factor 1 403 23.98 -2 494024..494611 + 195 150015295 - Cbei_0405 - hypothetical protein 404 34.40 +1 494685..495716 + 343 150015296 - Cbei_0406 - Sua5/YciO/YrdC/YwlC family protein 405 33.13 0 495722..496216 + 164 150015297 - Cbei_0407 - RpiB/LacA/LacB family sugar-phosphate isomerase 406 32.38 0 496366..496995 + 209 150015298 upp Cbei_0408 - uracil phosphoribosyltransferase 407 34.55 +1 497077..497571 + 164 150015299 - Cbei_0409 - CMP/dCMP deaminase, zinc-binding 408 32.75 0 497809..498999 + 396 150015300 - Cbei_0410 - UDP-N-acetylglucosamine 2-epimerase 409 36.38 +1 499121..500302 + 393 150015301 - Cbei_0411 - acetyl-CoA acetyltransferase 410 32.61 0 501380..502069 + 229 150015302 - Cbei_0412 - F0F1 ATP synthase subunit A 411 39.35 +2 502123..502338 + 71 150015303 - Cbei_0413 - F0F1 ATP synthase subunit C 412 30.21 0 502391..502870 + 159 150015304 - Cbei_0414 - F0F1 ATP synthase subunit B 413 26.30 -1 502873..503412 + 179 150015305 - Cbei_0415 - F0F1 ATP synthase subunit delta 414 32.81 0 503423..504937 + 504 150015306 - Cbei_0416 - F0F1 ATP synthase subunit alpha 415 31.92 0 504979..505830 + 283 150015307 - Cbei_0417 - F0F1 ATP synthase subunit gamma 416 36.35 +1 505845..507236 + 463 150015308 - Cbei_0418 - F0F1 ATP synthase subunit beta 417 32.60 0 507252..507659 + 135 150015309 - Cbei_0419 - ATP synthase F1, epsilon subunit 418 25.35 -1 507874..508524 + 216 150015310 - Cbei_0420 - hypothetical protein 419 34.28 +1 508686..509948 + 420 150015311 - Cbei_0421 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 420 32.67 0 510516..511574 + 352 150015312 - Cbei_0422 - sporulation stage II protein D 421 30.81 0 511999..512751 + 250 150015313 - Cbei_0423 - peptidase M23B 422 28.63 0 512859..513113 + 84 150015314 - Cbei_0424 - sporulation stage III, transcriptional regulator SpoIIID 423 35.36 +1 513193..514227 + 344 150015315 - Cbei_0425 - cell shape determining protein MreB 424 33.15 0 514295..514831 - 178 150015316 - Cbei_0426 - hypothetical protein 425 22.47 -2 514932..515336 + 134 150015317 - Cbei_0427 - hypothetical protein 426 35.80 +1 516603..517778 + 391 150015318 - Cbei_0428 - S-adenosylmethionine synthetase 427 30.87 0 518230..520458 + 742 150015319 - Cbei_0429 - RecD/TraA family helicase 428 27.14 -1 520477..521493 + 338 150015320 - Cbei_0430 - hypothetical protein 429 24.66 -1 521466..522122 + 218 150015321 - Cbei_0431 - ComF protein 430 29.59 0 522538..523071 + 177 150015322 - Cbei_0432 - sigma 54 modulation protein/ribosomal protein S30EA 431 34.19 +1 523416..525983 + 855 150015323 secA Cbei_0433 - preprotein translocase subunit SecA 432 33.64 0 526278..527252 + 324 150015324 - Cbei_0434 - peptide chain release factor 2 433 30.17 0 527914..528609 + 231 150015325 - Cbei_0435 - two component transcriptional regulator 434 26.68 -1 528599..530101 + 500 150015326 - Cbei_0436 - integral membrane sensor signal transduction histidine kinase 435 29.93 0 530300..531211 + 303 150015327 - Cbei_0437 - peptidase M50 436 28.07 0 531394..531564 + 56 150015328 - Cbei_0438 - hypothetical protein 437 32.46 0 531720..533897 + 725 150015329 - Cbei_0439 - RNA-binding S1 domain-containing protein 438 31.35 0 534155..535111 + 318 150015330 - Cbei_0440 - oxidoreductase domain-containing protein 439 29.35 0 535137..536090 + 317 150015331 - Cbei_0441 - hypothetical protein 440 26.10 -1 536187..537167 + 326 150015332 - Cbei_0442 - helix-turn-helix domain-containing protein 441 31.66 0 537514..538407 + 297 150015333 - Cbei_0443 - ROK family protein 442 34.10 +1 538563..540656 - 697 150015334 - Cbei_0444 - glutamine synthetase, catalytic region 443 30.84 0 541381..542784 + 467 150015335 - Cbei_0445 - rhamnulokinase 444 32.22 0 542921..544177 + 418 150015336 - Cbei_0446 - L-rhamnose isomerase 445 32.02 0 544306..545142 + 278 150015337 - Cbei_0447 - 5-keto-4-deoxyuronate isomerase 446 35.12 +1 545167..545949 + 260 150015338 - Cbei_0448 - 2-deoxy-D-gluconate 3-dehydrogenase 447 31.91 0 546348..547475 - 375 150015339 - Cbei_0449 - glycosy hydrolase family protein 448 28.79 0 547974..548810 + 278 150015340 - Cbei_0450 - xylose isomerase domain-containing protein 449 32.75 0 549399..550937 + 512 150015341 - Cbei_0451 - oligogalacturonide transporter 450 28.57 0 551096..551410 - 104 150015342 - Cbei_0452 - L-rhamnose 1-epimerase 451 30.30 0 551646..552404 + 252 150015343 - Cbei_0453 - DeoR family transcriptional regulator 452 32.36 0 552776..553594 + 272 150015344 - Cbei_0454 - rhamnulose-1-phosphate aldolase 453 34.54 +1 553934..555091 + 385 150015345 - Cbei_0455 - L-1,2-propanediol oxidoreductase 454 33.12 0 555541..556008 + 155 150015346 - Cbei_0456 - methylated-DNA--protein-cysteine methyltransferase 455 27.18 -1 556310..556927 + 205 150015347 - Cbei_0457 - DeoR family transcriptional regulator 456 28.66 0 557059..557871 + 270 150015348 - Cbei_0458 - Cof-like hydrolase 457 28.40 0 558114..558923 - 269 150015349 - Cbei_0459 - regulatory protein, IclR 458 36.02 +1 559167..559949 + 260 150015350 - Cbei_0460 - 2-deoxy-D-gluconate 3-dehydrogenase 459 31.65 0 560086..561033 + 315 150015351 - Cbei_0461 - ribokinase-like domain-containing protein 460 31.42 0 561123..561749 + 208 150015352 - Cbei_0462 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 461 25.13 -1 562066..562455 + 129 150015353 - Cbei_0463 - hemerythrin-like metal-binding protein 462 32.82 0 562927..563508 + 193 150015354 - Cbei_0464 - hypothetical protein 463 35.80 +1 564288..564449 + 53 150015355 - Cbei_0465 - rubredoxin-type Fe(Cys)4 protein 464 27.32 -1 564646..565410 + 254 150015356 - Cbei_0466 - DeoR family transcriptional regulator 465 32.20 0 565563..566003 - 146 150015357 - Cbei_0467 - ribosomal-protein-alanine acetyltransferase 466 31.56 0 566003..566737 - 244 150015358 - Cbei_0468 - peptidase M22, glycoprotease 467 29.00 0 566734..567195 - 153 150015359 - Cbei_0469 - hypothetical protein 468 25.25 -1 567643..568545 + 300 150015360 - Cbei_0470 - periplasmic solute binding protein 469 32.81 0 569016..569396 + 126 150015361 - Cbei_0471 - putative endoribonuclease L-PSP 470 33.33 0 569494..570561 - 355 150015362 - Cbei_0472 - 2-nitropropane dioxygenase, NPD 471 23.70 -2 571244..572260 + 338 150015363 - Cbei_0473 - hypothetical protein 472 35.94 +1 572475..572666 + 63 150015364 - Cbei_0474 - small acid-soluble spore protein, alpha/beta type 473 28.48 0 572898..574031 + 377 150015365 - Cbei_0475 - metallophosphoesterase 474 25.26 -1 574133..576868 + 911 150015366 - Cbei_0476 - hypothetical protein 475 31.88 0 576978..577874 + 298 150015367 - Cbei_0477 - periplasmic solute binding protein 476 27.86 0 578373..580163 + 596 150015368 - Cbei_0478 - DNA mismatch repair protein MutS domain-containing protein 477 26.86 -1 580211..581122 + 303 150015369 - Cbei_0479 - exonuclease, RNase T and DNA polymerase III 478 27.56 0 581241..581690 + 149 150015370 - Cbei_0480 - CBS domain-containing protein 479 29.39 0 581877..582536 - 219 150015371 - Cbei_0481 - hypothetical protein 480 29.80 0 582547..583197 - 216 150015372 - Cbei_0482 - phage shock protein A, PspA 481 30.38 0 583219..583896 - 225 150015373 - Cbei_0483 - hypothetical protein 482 31.17 0 584264..585418 + 384 150015374 rpsA Cbei_0484 - 30S ribosomal protein S1 483 33.54 0 585491..586909 - 472 150015375 - Cbei_0485 - pyruvate kinase 484 31.07 0 587073..588530 + 485 150015376 - Cbei_0486 - aminoacyl-histidine dipeptidase 485 31.14 0 588897..589490 + 197 150015377 - Cbei_0487 - NLP/P60 protein 486 31.56 0 589833..590507 + 224 150015378 - Cbei_0488 - hypothetical protein 487 31.92 0 590802..591368 + 188 150015379 - Cbei_0489 - Maf-like protein 488 30.43 0 591420..592109 + 229 150015380 radC Cbei_0490 - DNA repair protein RadC 489 35.00 +1 592130..593146 + 338 150015381 - Cbei_0491 - cell shape determining protein MreB 490 30.51 0 593149..593997 + 282 150015382 - Cbei_0492 - rod shape-determining protein MreC 491 27.44 0 594007..594498 + 163 150015383 - Cbei_0493 - rod shape-determining protein MreD 492 31.54 0 594495..597392 + 965 150015384 - Cbei_0494 - penicillin-binding protein, transpeptidase 493 29.81 0 597550..598230 + 226 150015385 - Cbei_0495 - sugar fermentation stimulation protein A 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0