version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3374 31.41 0 3985208..3986455 - 415 150018266 - Cbei_3439 - major facilitator transporter 3375 31.66 0 3986725..3987618 + 297 150018267 - Cbei_3440 - helix-turn-helix domain-containing protein 3376 33.74 0 3988035..3989492 - 485 150018268 - Cbei_3441 - transposase 3377 27.71 0 3989663..3990373 + 236 150018269 - Cbei_3442 - helix-turn-helix domain-containing protein 3378 34.28 +1 3990469..3991314 + 281 150018270 - Cbei_3443 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3379 28.30 0 3991549..3991866 + 105 150018271 - Cbei_3444 - hypothetical protein 3380 32.09 0 3991992..3992312 - 106 150018272 - Cbei_3445 - small multidrug resistance protein 3381 28.70 0 3992441..3993130 - 229 150018273 - Cbei_3446 - radical SAM domain-containing protein 3382 30.03 0 3993150..3993755 - 201 150018274 - Cbei_3447 - Solo B3/4 domain-containing protein 3383 28.51 0 3994127..3995371 - 414 150018275 - Cbei_3448 - hypothetical protein 3384 31.15 0 3996118..3996576 - 152 150018276 - Cbei_3449 - NUDIX hydrolase 3385 30.17 0 3996771..3997307 + 178 150018277 - Cbei_3450 - transposase (21) 3386 32.15 0 3997327..3997833 + 168 150018278 - Cbei_3451 - transposase related protein (20) 3387 26.37 -1 3997997..3998398 - 133 150018279 - Cbei_3452 - hypothetical protein 3388 31.39 0 3999601..4000473 - 290 150018280 - Cbei_3453 - transcription activator, effector binding 3389 31.98 0 4000491..4001600 - 369 150018281 - Cbei_3454 - peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 3390 29.12 0 4001698..4002861 - 387 150018282 - Cbei_3455 - MerR family transcriptional regulator 3391 31.40 0 4003101..4003307 - 68 150018283 - Cbei_3456 - XRE family transcriptional regulator 3392 31.10 0 4003332..4003778 - 148 150018284 - Cbei_3457 - hypothetical protein 3393 29.38 0 4004086..4004718 - 210 150018285 - Cbei_3458 - acetyltransferase 3394 32.73 0 4005458..4006288 - 276 150018286 - Cbei_3459 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3395 31.19 0 4006345..4007091 - 248 150018287 - Cbei_3460 - SMC domain-containing protein 3396 27.31 -1 4007144..4007575 - 143 150018288 - Cbei_3461 - hypothetical protein 3397 29.67 0 4007935..4008753 - 272 150018289 - Cbei_3462 - abortive infection protein 3398 27.57 0 4008971..4009543 - 190 150018290 - Cbei_3463 - methyltransferase type 12 3399 38.33 +2 4009961..4011121 - 386 150018291 - Cbei_3464 - hypothetical protein 3400 24.77 -1 4011445..4011993 - 182 150018292 - Cbei_3465 - hypothetical protein 3401 26.57 -1 4012194..4013051 + 285 150018293 - Cbei_3466 - LysR family transcriptional regulator 3402 34.00 +1 4013357..4014103 - 248 150018294 - Cbei_3467 - MerR family transcriptional regulator 3403 32.91 0 4014404..4014871 - 155 150018295 - Cbei_3468 - flavodoxin 3404 27.20 -1 4014936..4015994 - 352 150018296 - Cbei_3469 - histidine kinase 3405 30.61 0 4015999..4017138 - 379 150018297 - Cbei_3470 - hypothetical protein 3406 29.41 0 4017187..4018383 - 398 150018298 - Cbei_3471 - putative signal transduction protein 3407 28.99 0 4018805..4020070 - 421 150018299 - Cbei_3472 - oxidoreductase FAD/NAD(P)-binding subunit 3408 24.61 -1 4020100..4020672 - 190 150018300 - Cbei_3473 - CDP-alcohol phosphatidyltransferase 3409 25.77 -1 4020929..4021708 - 259 150018301 - Cbei_3474 - polysaccharide deacetylase 3410 26.79 -1 4022038..4023000 - 320 150018302 - Cbei_3475 - ketopantoate reductase ApbA/PanE 3411 23.48 -2 4023388..4023732 - 114 150018303 - Cbei_3477 - hypothetical protein 3412 30.92 0 4024048..4024503 - 151 150018304 - Cbei_3478 - hypothetical protein 3413 34.30 +1 4024496..4024702 - 68 150018305 - Cbei_3479 - XRE family transcriptional regulator 3414 23.56 -2 4025107..4025556 - 149 150018306 - Cbei_3480 - MarR family transcriptional regulator 3415 29.68 0 4025581..4026210 - 209 150018307 - Cbei_3481 - methyltransferase type 11 3416 31.79 0 4026662..4027114 - 150 150018308 - Cbei_3482 - peptide deformylase 3417 32.91 0 4027115..4027351 - 78 150018309 - Cbei_3483 - XRE family transcriptional regulator 3418 33.70 0 4027509..4028060 - 183 150018310 - Cbei_3484 - NADPH-dependent FMN reductase 3419 31.15 0 4028209..4028529 + 106 150018311 - Cbei_3485 - HxlR family transcriptional regulator 3420 33.94 +1 4028772..4029593 - 273 150018312 - Cbei_3486 - methyl-accepting chemotaxis sensory transducer 3421 29.87 0 4030613..4031161 - 182 150018313 - Cbei_3488 - hypothetical protein 3422 28.21 0 4031343..4031849 - 168 150018314 - Cbei_3489 - hypothetical protein 3423 27.78 0 4031937..4032242 - 101 150018315 - Cbei_3490 - hypothetical protein 3424 30.94 0 4032397..4033191 - 264 150018316 - Cbei_3491 - hypothetical protein 3425 27.38 -1 4033490..4034749 - 419 150018317 - Cbei_3492 - major facilitator transporter 3426 25.53 -1 4034883..4036100 - 405 150018318 - Cbei_3493 - MerR family transcriptional regulator 3427 30.15 0 4036329..4037240 - 303 150018319 - Cbei_3494 - hypothetical protein 3428 29.32 0 4037413..4038135 - 240 150018320 - Cbei_3495 - beta-lactamase domain-containing protein 3429 33.26 0 4038558..4039871 + 437 150018321 - Cbei_3496 - FAD linked oxidase domain-containing protein 3430 35.52 +1 4040005..4040871 - 288 150018322 - Cbei_3497 - ROK family protein 3431 33.78 0 4040936..4042048 - 370 150018323 - Cbei_3498 - hypothetical protein 3432 27.26 -1 4042074..4042913 - 279 150018324 - Cbei_3499 - binding-protein-dependent transport systems inner membrane component 3433 31.74 0 4042925..4043803 - 292 150018325 - Cbei_3500 - binding-protein-dependent transport systems inner membrane component 3434 32.38 0 4043984..4045240 - 418 150018326 - Cbei_3501 - extracellular solute-binding protein 3435 24.66 -1 4045454..4047274 + 606 150018327 - Cbei_3502 - histidine kinase internal region 3436 23.37 -2 4047300..4048895 + 531 150018328 - Cbei_3503 - response regulator receiver protein 3437 27.02 -1 4049278..4049736 + 152 150018329 - Cbei_3504 - response regulator receiver protein 3438 26.36 -1 4050283..4050798 + 171 150018330 - Cbei_3505 - hypothetical protein 3439 29.71 0 4051061..4051999 - 312 150018331 - Cbei_3506 - LysR family transcriptional regulator 3440 33.06 0 4052087..4053202 + 371 150018332 - Cbei_3507 - type I phosphodiesterase/nucleotide pyrophosphatase 3441 37.38 +2 4053274..4054236 + 320 150018333 - Cbei_3508 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 3442 28.29 0 4054332..4055204 - 290 150018334 - Cbei_3509 - radical SAM domain-containing protein 3443 35.58 +1 4055263..4055796 - 177 150018335 - Cbei_3510 - hypothetical protein 3444 27.25 -1 4055978..4056388 - 136 150018336 - Cbei_3511 - peptide deformylase 3445 31.72 0 4056725..4057594 - 289 150018337 - Cbei_3512 - 2,5-didehydrogluconate reductase 3446 33.91 +1 4057667..4058011 - 114 150018338 - Cbei_3513 - regulatory protein, ArsR 3447 29.38 0 4058736..4059494 + 252 150018339 - Cbei_3514 - hypothetical protein 3448 32.55 0 4059746..4060387 - 213 150018340 - Cbei_3515 - chloramphenicol O-acetyltransferase 3449 36.02 +1 4060539..4063142 - 867 150018341 - Cbei_3516 - phosphoenolpyruvate synthase 3450 30.20 0 4063760..4064653 - 297 150018342 - Cbei_3517 - ROK family protein 3451 31.07 0 4065119..4066135 - 338 150018343 - Cbei_3518 - aldose 1-epimerase 3452 34.13 +1 4066159..4068303 - 714 150018344 - Cbei_3519 - hydantoinase/oxoprolinase 3453 26.41 -1 4068630..4069496 - 288 150018345 - Cbei_3520 - RpiR family transcriptional regulator 3454 23.36 -2 4069663..4070334 - 223 150018346 - Cbei_3521 - hypothetical protein 3455 33.26 0 4070401..4071693 - 430 150018347 - Cbei_3522 - citrate transporter 3456 36.15 +1 4071755..4073104 - 449 150018348 - Cbei_3523 - hypothetical protein 3457 29.95 0 4073299..4075335 - 678 150018349 - Cbei_3524 - methyl-accepting chemotaxis sensory transducer 3458 34.55 +1 4076335..4077159 - 274 150018350 - Cbei_3526 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3459 37.97 +2 4077683..4078480 + 265 150018351 - Cbei_3527 - short chain dehydrogenase 3460 26.74 -1 4078672..4078959 + 95 150018352 - Cbei_3528 - stress responsive alpha-beta barrel domain-containing protein 3461 30.75 0 4079338..4079841 - 167 150018353 - Cbei_3529 - BadM/Rrf2 family transcriptional regulator 3462 29.84 0 4080046..4080417 + 123 150018354 - Cbei_3530 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 3463 36.16 +1 4080442..4080618 + 58 150018355 - Cbei_3531 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3464 31.37 0 4080819..4081835 - 338 150018356 - Cbei_3532 - NADPH dehydrogenase NamA 3465 32.74 0 4081981..4082316 + 111 150018357 - Cbei_3533 - HxlR family transcriptional regulator 3466 28.87 0 4082658..4083419 + 253 150018358 - Cbei_3534 - DeoR family transcriptional regulator 3467 30.33 0 4083789..4084421 - 210 150018359 - Cbei_3535 - hypothetical protein 3468 30.47 0 4084408..4084686 - 92 150018360 - Cbei_3536 - regulatory protein, ArsR 3469 27.59 0 4084846..4085907 - 353 150018361 - Cbei_3537 - hypothetical protein 3470 26.10 -1 4085897..4086463 - 188 150018362 - Cbei_3538 - ECF subfamily RNA polymerase sigma-24 factor 3471 30.88 0 4086774..4087385 - 203 150018363 - Cbei_3539 - binding-protein-dependent transport systems inner membrane component 3472 32.66 0 4087572..4088315 - 247 150018364 - Cbei_3540 - ABC transporter related 3473 30.90 0 4088338..4089240 - 300 150018365 - Cbei_3541 - substrate-binding region of ABC-type glycine betaine transport system 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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