version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2927 29.38 0 3481677..3482258 + 193 150017819 - Cbei_2977 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2928 30.70 0 3482314..3482883 - 189 150017820 - Cbei_2978 - SNARE associated Golgi protein 2929 38.10 +2 3483109..3483318 - 69 150017821 - Cbei_2979 - hypothetical protein 2930 33.89 +1 3483657..3484562 + 301 150017822 - Cbei_2980 - multicopper oxidase, type 3 2931 32.27 0 3484687..3484968 - 93 150017823 - Cbei_2981 - hypothetical protein 2932 25.11 -1 3484999..3485229 - 76 150017824 - Cbei_2982 - hypothetical protein 2933 28.17 0 3486194..3487567 - 457 150017825 - Cbei_2984 - integral membrane sensor signal transduction histidine kinase 2934 28.51 0 3487564..3488247 - 227 150017826 - Cbei_2985 - two component transcriptional regulator 2935 31.43 0 3488619..3490037 - 472 150017827 - Cbei_2986 - proton-translocating NADH-quinone oxidoreductase, chain N 2936 33.86 0 3490040..3491563 - 507 150017828 - Cbei_2987 - proton-translocating NADH-quinone oxidoreductase, chain M 2937 32.31 0 3491564..3493417 - 617 150017829 - Cbei_2988 - proton-translocating NADH-quinone oxidoreductase, chain L 2938 31.39 0 3493426..3493734 - 102 150017830 - Cbei_2989 - NADH-ubiquinone oxidoreductase, chain 4L 2939 29.07 0 3493735..3494226 - 163 150017831 - Cbei_2990 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 2940 31.54 0 3494316..3494705 - 129 150017832 - Cbei_2991 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2941 31.69 0 3494878..3495912 - 344 150017833 - Cbei_2992 - NADH dehydrogenase (quinone) 2942 35.22 +1 3495926..3497038 - 370 150017834 - Cbei_2993 - NADH dehydrogenase subunit D 2943 29.91 0 3497057..3497494 - 145 150017835 - Cbei_2994 - NADH dehydrogenase (ubiquinone), 30 kDa subunit 2944 37.06 +1 3497487..3497996 - 169 150017836 - Cbei_2995 - NADH-quinone oxidoreductase, B subunit 2945 31.93 0 3497987..3498343 - 118 150017837 - Cbei_2996 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 2946 26.09 -1 3498896..3499102 - 68 150017838 - Cbei_2997 - hypothetical protein 2947 30.86 0 3499171..3499614 - 147 150017839 - Cbei_2998 - hypothetical protein 2948 28.83 0 3499843..3500730 - 295 150017840 - Cbei_2999 - UbiA prenyltransferase 2949 30.75 0 3501229..3502929 - 566 150017841 - Cbei_3000 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2950 33.68 0 3503267..3504133 - 288 150017842 - Cbei_3001 - nitrite and sulphite reductase 4Fe-4S region 2951 34.55 +1 3504255..3505073 - 272 150017843 - Cbei_3002 - hypothetical protein 2952 29.22 0 3505245..3505901 - 218 150017844 - Cbei_3003 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2953 29.12 0 3506314..3507096 - 260 150017845 - Cbei_3004 - prolipoprotein diacylglyceryl transferase 2954 27.33 -1 3507101..3508249 - 382 150017846 - Cbei_3005 - ROK family protein 2955 33.43 0 3508416..3509417 - 333 150017847 - Cbei_3006 - hydrogenase expression/formation protein HypE 2956 30.28 0 3509418..3510497 - 359 150017848 - Cbei_3007 - hydrogenase formation HypD protein 2957 31.14 0 3510494..3510721 - 75 150017849 - Cbei_3008 - hydrogenase assembly chaperone hypC/hupF 2958 31.51 0 3510881..3513181 - 766 150017850 - Cbei_3009 - (NiFe) hydrogenase maturation protein HypF 2959 27.06 -1 3513233..3513487 - 84 150017851 - Cbei_3010 - hypothetical protein 2960 28.27 0 3513504..3513977 - 157 150017852 - Cbei_3011 - hydrogenase maturation protease 2961 31.61 0 3514299..3515690 - 463 150017853 - Cbei_3012 - nickel-dependent hydrogenase, large subunit 2962 37.33 +2 3515699..3516574 - 291 150017854 - Cbei_3013 - hydrogenase (NiFe) small subunit HydA 2963 31.45 0 3517021..3518667 + 548 150017855 - Cbei_3014 - hydroxylamine reductase 2964 34.29 +1 3518783..3519199 - 138 150017856 - Cbei_3015 - flavodoxin 2965 28.99 0 3519391..3520104 - 237 150017857 - Cbei_3016 - CRP/FNR family transcriptional regulator 2966 29.28 0 3520375..3521607 + 410 150017858 - Cbei_3017 - beta-lactamase domain-containing protein 2967 33.67 0 3521804..3522994 - 396 150017859 - Cbei_3018 - beta-lactamase domain-containing protein 2968 31.94 0 3523235..3524458 - 407 150017860 - Cbei_3019 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2969 35.10 +1 3524784..3526712 + 642 150017861 - Cbei_3020 - carbon-monoxide dehydrogenase, catalytic subunit 2970 33.94 +1 3526913..3527242 - 109 150017862 - Cbei_3021 - hypothetical protein 2971 29.75 0 3527480..3528427 - 315 150017863 - Cbei_3022 - methyl-accepting chemotaxis sensory transducer 2972 28.94 0 3528894..3529439 + 181 150017864 - Cbei_3023 - hypothetical protein 2973 33.27 0 3529457..3531046 + 529 150017865 - Cbei_3024 - sulfite reductase (ferredoxin) 2974 30.82 0 3531109..3531864 - 251 150017866 - Cbei_3025 - nitroreductase 2975 30.08 0 3532148..3532516 - 122 150017867 - Cbei_3026 - heavy metal transport/detoxification protein 2976 32.58 0 3532869..3533396 + 175 150017868 - Cbei_3027 - PadR-like family transcriptional regulator 2977 32.60 0 3533402..3534766 + 454 150017869 - Cbei_3028 - major facilitator transporter 2978 28.21 0 3534991..3535341 - 116 150017870 - Cbei_3029 - hypothetical protein 2979 29.03 0 3535472..3536818 - 448 150017871 - Cbei_3030 - radical SAM domain-containing protein 2980 33.80 0 3537037..3537252 - 71 150017872 - Cbei_3031 - XRE family transcriptional regulator 2981 33.12 0 3537309..3537785 - 158 150017873 - Cbei_3032 - uncharacterized membrane protein 2982 29.06 0 3537935..3538636 - 233 150017874 - Cbei_3033 - hypothetical protein 2983 26.54 -1 3538636..3539091 - 151 150017875 - Cbei_3034 - response regulator receiver protein 2984 34.41 +1 3539357..3539821 + 154 150017876 - Cbei_3035 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2985 33.19 0 3540022..3540699 - 225 150017877 - Cbei_3036 - cell wall binding repeat-containing protein 2986 34.82 +1 3540988..3542871 - 627 150017878 - Cbei_3037 - ATP-dependent metalloprotease FtsH 2987 35.96 +1 3542965..3543648 - 227 150017879 - Cbei_3038 - peptidase, membrane zinc metallopeptidase, putative 2988 31.98 0 3544020..3544907 - 295 150017880 - Cbei_3039 - fructose-1,6-bisphosphate aldolase 2989 33.81 0 3545055..3545885 - 276 150017881 - Cbei_3040 - hypothetical protein 2990 37.98 +2 3546169..3546813 - 214 150017882 - Cbei_3041 - endo-1,4-beta-xylanase 2991 30.19 0 3547597..3547914 + 105 150017883 - Cbei_3042 - hypothetical protein 2992 31.88 0 3548475..3549092 - 205 150017884 - Cbei_3043 - hypothetical protein 2993 28.57 0 3550247..3550414 - 55 150017885 - Cbei_3044 - hypothetical protein 2994 30.89 0 3550680..3552401 - 573 150017886 - Cbei_3045 - methyl-accepting chemotaxis sensory transducer 2995 34.40 +1 3553071..3554006 - 311 150017887 - Cbei_3046 - NADPH-dependent FMN reductase 2996 28.46 0 3554324..3556849 + 841 150017888 - Cbei_3047 - xylan 1,4-beta-xylosidase 2997 28.89 0 3557253..3558806 - 517 150017889 - Cbei_3049 - ABC transporter related 2998 23.55 -2 3558960..3559235 - 91 150017890 - Cbei_3050 - response regulator receiver protein 2999 31.36 0 3559510..3560727 - 405 150017891 - Cbei_3051 - metal dependent phosphohydrolase 3000 30.03 0 3560796..3562187 - 463 150017892 - Cbei_3052 - integral membrane sensor signal transduction histidine kinase 3001 30.82 0 3562171..3562887 - 238 150017893 - Cbei_3053 - two component transcriptional regulator 3002 31.16 0 3563517..3565262 - 581 150017894 - Cbei_3054 - FMN-binding domain-containing protein 3003 30.79 0 3565310..3566371 - 353 150017895 - Cbei_3055 - ApbE family lipoprotein 3004 32.22 0 3566600..3566779 - 59 150017896 - Cbei_3056 - BFD/(2Fe-2S)-binding domain-containing protein 3005 29.79 0 3566933..3567553 - 206 150017897 - Cbei_3057 - nitroreductase 3006 30.20 0 3567635..3568336 - 233 150017898 - Cbei_3058 - pirin domain-containing protein 3007 28.86 0 3568591..3569037 - 148 150017899 - Cbei_3059 - MarR family transcriptional regulator 3008 32.78 0 3569205..3570650 - 481 150017900 - Cbei_3060 - FAD dependent oxidoreductase 3009 32.69 0 3570835..3571773 - 312 150017901 - Cbei_3061 - hypothetical protein 3010 33.88 +1 3572045..3572776 - 243 150017902 - Cbei_3062 - hypothetical protein 3011 34.06 +1 3573564..3573839 + 91 150017903 - Cbei_3063 - hypothetical protein 3012 35.16 +1 3573848..3575713 + 621 150017904 - Cbei_3064 - heavy metal translocating P-type ATPase 3013 27.58 0 3576024..3576527 - 167 150017905 - Cbei_3065 - GCN5-related N-acetyltransferase 3014 28.38 0 3576901..3578151 - 416 150017906 - Cbei_3066 - hypothetical protein 3015 29.91 0 3578329..3578649 + 106 150017907 - Cbei_3067 - hypothetical protein 3016 34.33 +1 3579152..3579553 + 133 150017908 - Cbei_3069 - rubrerythrin 3017 30.28 0 3580070..3581116 + 348 150017909 - Cbei_3070 - putative galactoside ABC transporter 3018 30.08 0 3581336..3582166 - 276 150017910 - Cbei_3071 - GCN5-related N-acetyltransferase 3019 28.55 0 3582400..3583674 - 424 150017911 - Cbei_3072 - hypothetical protein 3020 29.03 0 3583872..3584939 + 355 150017912 - Cbei_3073 - D-galactose-binding periplasmic protein precursor 3021 27.11 -1 3585294..3587303 - 669 150017913 - Cbei_3074 - PAS/PAC sensor hybrid histidine kinase 3022 28.09 0 3587405..3589159 - 584 150017914 - Cbei_3075 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 3023 28.95 0 3589149..3590267 - 372 150017915 - Cbei_3076 - diguanylate cyclase 3024 25.60 -1 3590372..3590953 - 193 150017916 - Cbei_3077 - TetR family transcriptional regulator 3025 27.68 0 3591316..3593580 - 754 150017917 - Cbei_3078 - PAS/PAC sensor hybrid histidine kinase 3026 27.51 0 3593627..3596701 - 1024 150017918 - Cbei_3079 - PAS/PAC sensor hybrid histidine kinase 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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