version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 138 29.00 0 176129..176359 + 76 150015030 secE Cbei_0138 - preprotein translocase subunit SecE 139 36.26 +1 176373..176918 + 181 150015031 nusG Cbei_0139 - transcription antitermination protein NusG 140 36.62 +1 176997..177422 + 141 150015032 - Cbei_0140 - ribosomal protein L11 141 35.94 +1 177477..178166 + 229 150015033 rplA Cbei_0141 - 50S ribosomal protein L1 142 31.35 0 178369..178872 + 167 150015034 rplJ Cbei_0142 - 50S ribosomal protein L10 143 36.89 +1 178924..179289 + 121 150015035 - Cbei_0143 - ribosomal protein L7/L12 144 33.98 +1 179620..183330 + 1236 150015036 rpoB Cbei_0144 - DNA-directed RNA polymerase subunit beta 145 34.55 +1 183352..186888 + 1178 150015037 - Cbei_0145 - DNA-directed RNA polymerase subunit beta' 146 37.83 +2 187145..187522 + 125 150015038 rpsL Cbei_0146 - 30S ribosomal protein S12 147 34.61 +1 187672..188142 + 156 150015039 - Cbei_0147 - 30S ribosomal protein S7 148 35.17 +1 188226..190292 + 688 150015040 - Cbei_0148 - elongation factor G 149 37.27 +2 190480..191673 + 397 150015041 - Cbei_0149 - elongation factor Tu 150 32.36 0 192128..192436 + 102 150015042 rpsJ Cbei_0150 - 30S ribosomal protein S10 151 34.13 +1 192509..193138 + 209 150015043 rplC Cbei_0151 - 50S ribosomal protein L3 152 33.33 0 193165..193785 + 206 150015044 rplD Cbei_0152 - 50S ribosomal protein L4 153 32.66 0 193785..194081 + 98 150015045 rplW Cbei_0153 - 50S ribosomal protein L23 154 36.33 +1 194146..194979 + 277 150015046 rplB Cbei_0154 - 50S ribosomal protein L2 155 32.97 0 195045..195317 + 90 150015047 rpsS Cbei_0155 - 30S ribosomal protein S19 156 30.95 0 195338..195673 + 111 150015048 rplV Cbei_0156 - 50S ribosomal protein L22 157 33.33 0 195698..196363 + 221 150015049 rpsC Cbei_0157 - 30S ribosomal protein S3 158 36.78 +1 196381..196815 + 144 150015050 rplP Cbei_0158 - 50S ribosomal protein L16 159 29.58 0 196815..197027 + 70 150015051 - Cbei_0159 - ribosomal protein L29 160 29.41 0 197051..197305 + 84 150015052 rpsQ Cbei_0160 - 30S ribosomal protein S17 161 34.42 +1 197334..197702 + 122 150015053 rplN Cbei_0161 - 50S ribosomal protein L14 162 30.79 0 197718..198032 + 104 150015054 rplX Cbei_0162 - 50S ribosomal protein L24 163 32.78 0 198055..198594 + 179 150015055 rplE Cbei_0163 - 50S ribosomal protein L5 164 35.48 +1 198611..198796 + 61 150015056 rpsN Cbei_0164 - 30S ribosomal protein S14 165 32.33 0 198829..199227 + 132 150015057 rpsH Cbei_0165 - 30S ribosomal protein S8 166 34.25 +1 199296..199838 + 180 150015058 rplF Cbei_0166 - 50S ribosomal protein L6 167 35.00 +1 199857..200216 + 119 150015059 rplR Cbei_0167 - 50S ribosomal protein L18 168 37.35 +2 200237..200734 + 165 150015060 rpsE Cbei_0168 - 30S ribosomal protein S5 169 30.56 0 200747..200926 + 59 150015061 rpmD Cbei_0169 - 50S ribosomal protein L30 170 36.73 +1 200948..201388 + 146 150015062 rplO Cbei_0170 - 50S ribosomal protein L15 171 32.56 0 201390..202688 + 432 150015063 secY Cbei_0171 - preprotein translocase subunit SecY 172 34.41 +1 202714..203364 + 216 150015064 adk Cbei_0172 - adenylate kinase 173 35.60 +1 203364..204113 + 249 150015065 - Cbei_0173 - methionine aminopeptidase, type I 174 29.08 0 204201..204482 + 93 150015066 - Cbei_0174 - hypothetical protein 175 31.96 0 204490..204708 + 72 150015067 - Cbei_0175 - translation initiation factor IF-1 176 34.21 +1 204763..204876 + 37 150015068 rpmJ Cbei_0176 - 50S ribosomal protein L36 177 30.62 0 205100..205468 + 122 150015069 rpsM Cbei_0177 - 30S ribosomal protein S13 178 37.88 +2 205484..205879 + 131 150015070 - Cbei_0178 - 30S ribosomal protein S11 179 31.72 0 205910..206530 + 206 150015071 rpsD Cbei_0179 - 30S ribosomal protein S4 180 30.49 0 206633..207580 + 315 150015072 - Cbei_0180 - DNA-directed RNA polymerase subunit alpha 181 32.75 0 207593..207934 + 113 150015073 rplQ Cbei_0181 - 50S ribosomal protein L17 182 35.33 +1 208168..209019 + 283 150015074 - Cbei_0182 - cobalt transporter ATP-binding subunit 183 33.79 0 209004..209873 + 289 150015075 - Cbei_0183 - cobalt transporter ATP-binding subunit 184 32.47 0 209882..210688 + 268 150015076 - Cbei_0184 - cobalt transport protein 185 31.02 0 210705..211439 + 244 150015077 truA Cbei_0185 - tRNA pseudouridine synthase A 186 32.41 0 211600..212034 + 144 150015078 rplM Cbei_0186 - 50S ribosomal protein L13 187 35.11 +1 212061..212453 + 130 150015079 rpsI Cbei_0187 - 30S ribosomal protein S9 188 33.63 0 212974..213636 + 220 150015080 - Cbei_0188 - N-acetylmuramoyl-L-alanine amidase CwlD 189 33.81 0 214215..215057 + 280 150015081 - Cbei_0189 - fumarate hydratase 190 34.41 +1 215262..215819 + 185 150015082 - Cbei_0190 - fumarate hydratase 191 27.69 0 215860..216621 + 253 150015083 - Cbei_0191 - TPR repeat-containing protein 192 30.16 0 216687..217379 + 230 150015084 - Cbei_0192 - two component transcriptional regulator 193 27.48 0 217546..218706 + 386 150015085 - Cbei_0193 - integral membrane sensor signal transduction histidine kinase 194 32.57 0 218903..221134 + 743 150015086 - Cbei_0194 - ribonucleotide-diphosphate reductase subunit alpha 195 27.73 0 221388..222422 + 344 150015087 nrdF Cbei_0195 - ribonucleotide-diphosphate reductase subunit beta 196 32.41 0 222653..224272 + 539 150015088 - Cbei_0196 - phosphoenolpyruvate-protein phosphotransferase 197 28.67 0 224417..225682 + 421 150015089 - Cbei_0197 - TPR repeat-containing protein 198 34.18 +1 225844..227019 + 391 150015090 - Cbei_0198 - isoaspartyl dipeptidase 199 32.34 0 227090..227695 - 201 150015091 - Cbei_0199 - cell wall hydrolase, SleB 200 30.74 0 227940..228788 + 282 150015092 - Cbei_0200 - hypothetical protein 201 31.37 0 228761..229981 + 406 150015093 - Cbei_0201 - YbbR family protein 202 34.14 +1 230153..231754 + 533 150015094 - Cbei_0202 - hypothetical protein 203 33.77 0 232027..232935 + 302 150015095 - Cbei_0203 - phosphate butyryltransferase 204 34.46 +1 233080..234147 + 355 150015096 - Cbei_0204 - butyrate kinase 205 27.00 -1 234292..234765 + 157 150015097 - Cbei_0205 - metal dependent phosphohydrolase 206 31.98 0 234782..235591 + 269 150015098 - Cbei_0206 - dihydropteroate synthase 207 29.45 0 235604..236428 + 274 150015099 - Cbei_0207 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 208 32.62 0 236467..237303 + 278 150015100 - Cbei_0208 - hypothetical protein 209 25.99 -1 237444..237797 + 117 150015101 - Cbei_0209 - TrpR like protein, YerC/YecD 210 33.04 0 238013..239359 + 448 150015102 - Cbei_0210 - phosphoglucosamine mutase 211 30.52 0 239587..240012 + 141 150015103 - Cbei_0211 - hypothetical protein 212 33.33 0 240552..241061 + 169 150015104 - Cbei_0212 - acetolactate synthase, small subunit 213 34.09 +1 241127..242722 + 531 150015105 - Cbei_0213 - alpha-isopropylmalate/homocitrate synthase family transferase 214 35.79 +1 242736..243995 + 419 150015106 - Cbei_0214 - 3-isopropylmalate dehydratase, large subunit 215 32.30 0 244009..244494 + 161 150015107 - Cbei_0215 - 3-isopropylmalate dehydratase, small subunit 216 34.90 +1 244634..245716 + 360 150015108 - Cbei_0216 - 3-isopropylmalate dehydrogenase 217 33.15 0 245786..247459 + 557 150015109 - Cbei_0217 - acetolactate synthase, large subunit, biosynthetic type 218 35.22 +1 247472..248476 + 334 150015110 - Cbei_0218 - ketol-acid reductoisomerase 219 30.63 0 249021..251945 + 974 150015111 - Cbei_0219 - sigma-54 factor interaction domain-containing protein 220 28.21 0 252039..252506 + 155 150015112 - Cbei_0220 - putative PTS IIA-like nitrogen-regulatory protein PtsN 221 31.90 0 252522..252800 + 92 150015113 - Cbei_0221 - phosphotransferase system, lactose/cellobiose-specific IIB subunit 222 34.20 +1 252876..254150 + 424 150015114 - Cbei_0222 - PTS system, galactitol-specific IIC subunit 223 32.66 0 254220..255251 + 343 150015115 - Cbei_0223 - alcohol dehydrogenase 224 34.68 +1 255275..256093 + 272 150015116 - Cbei_0224 - transketolase domain-containing protein 225 33.88 +1 256093..257013 + 306 150015117 - Cbei_0225 - transketolase, central region 226 31.70 0 257057..257728 + 223 150015118 - Cbei_0226 - ribulose-phosphate 3-epimerase 227 33.11 0 257842..258291 + 149 150015119 - Cbei_0227 - RpiB/LacA/LacB family sugar-phosphate isomerase 228 30.33 0 258399..259928 + 509 150015120 - Cbei_0228 - phosphomannomutase 229 29.55 0 260139..260402 + 87 150015121 - Cbei_0229 - excinuclease ABC subunit C 230 33.87 +1 260772..262085 + 437 150015122 - Cbei_0230 - extracellular solute-binding protein 231 29.64 0 262194..263060 + 288 150015123 - Cbei_0231 - binding-protein-dependent transport systems inner membrane component 232 31.00 0 263060..263959 + 299 150015124 - Cbei_0232 - binding-protein-dependent transport systems inner membrane component 233 33.60 0 264114..265604 + 496 150015125 - Cbei_0233 - 4-alpha-glucanotransferase 234 31.04 0 265991..266992 + 333 150015126 - Cbei_0234 - alanine racemase 235 29.10 0 267230..268435 + 401 150015127 - Cbei_0235 - encapsulation protein CapA 236 33.33 0 268865..270301 + 478 150015128 - Cbei_0236 - RND family efflux transporter MFP subunit 237 32.93 0 270307..271044 + 245 150015129 - Cbei_0237 - ABC transporter related 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0