version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1485 26.67 -1 1770542..1770916 + 124 150016377 - Cbei_1499 - hypothetical protein 1486 27.12 -1 1771147..1771677 + 176 150016378 - Cbei_1500 - PadR-like family transcriptional regulator 1487 32.96 0 1771707..1773044 + 445 150016379 - Cbei_1501 - glycosyl transferase 1488 34.89 +1 1773060..1773380 + 106 150016380 - Cbei_1502 - carboxymuconolactone decarboxylase 1489 22.55 -2 1774189..1774392 + 67 150016381 - Cbei_1503 - hypothetical protein 1490 36.34 +1 1775004..1775801 + 265 150016382 - Cbei_1504 - hypothetical protein 1491 28.35 0 1776063..1777307 + 414 150016383 - Cbei_1505 - natural resistance-associated macrophage protein 1492 29.98 0 1777662..1778645 + 327 150016384 - Cbei_1506 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1493 30.73 0 1778738..1779352 + 204 150016385 - Cbei_1507 - superoxide dismutase 1494 30.88 0 1779445..1780545 - 366 150016386 - Cbei_1508 - hypothetical protein 1495 29.29 0 1780675..1781391 - 238 150016387 - Cbei_1509 - hypothetical protein 1496 37.64 +2 1781864..1783534 - 556 150016388 - Cbei_1510 - dihydroxy-acid dehydratase 1497 32.02 0 1783676..1784362 - 228 150016389 - Cbei_1511 - GntR domain-containing protein 1498 32.16 0 1785175..1786113 - 312 150016390 - Cbei_1512 - auxin efflux carrier 1499 26.43 -1 1786179..1786859 - 226 150016391 - Cbei_1513 - GntR family transcriptional regulator 1500 45.70 +2 1787065..1787250 - 61 150016392 - Cbei_1514 - hypothetical protein 1501 30.69 0 1787711..1789753 + 680 150016393 - Cbei_1515 - hypothetical protein 1502 31.96 0 1790009..1790734 + 241 150016394 - Cbei_1516 - ABC transporter related 1503 29.12 0 1790727..1792364 + 545 150016395 - Cbei_1517 - uncharacterized membrane protein, putative 1504 34.34 +1 1792567..1792764 + 65 150016396 - Cbei_1518 - thiamine biosynthesis protein ThiS 1505 37.35 +2 1792970..1793740 + 256 150016397 thiG Cbei_1519 - thiazole synthase 1506 35.14 +1 1793751..1794911 + 386 150016398 thiH Cbei_1520 - thiamine biosynthesis protein ThiH 1507 30.26 0 1795087..1795737 - 216 150016399 - Cbei_1521 - TetR family transcriptional regulator 1508 34.32 +1 1796024..1797547 + 507 150016400 - Cbei_1522 - EmrB/QacA family drug resistance transporter 1509 27.53 0 1797706..1798170 + 154 150016401 - Cbei_1523 - CBS domain-containing protein 1510 33.49 0 1798317..1799588 - 423 150016402 - Cbei_1524 - sodium:dicarboxylate symporter 1511 30.24 0 1800639..1801253 + 204 150016403 - Cbei_1525 - hypothetical protein 1512 31.33 0 1801317..1801814 + 165 150016404 - Cbei_1526 - ErfK/YbiS/YcfS/YnhG family protein 1513 28.51 0 1802425..1803294 + 289 150016405 - Cbei_1527 - radical SAM domain-containing protein 1514 27.89 0 1803311..1804045 + 244 150016406 - Cbei_1528 - hypothetical protein 1515 22.98 -2 1804164..1804733 + 189 150016407 - Cbei_1529 - hypothetical protein 1516 33.17 0 1804938..1805534 + 198 150016408 ruvA Cbei_1530 - Holliday junction DNA helicase motor protein 1517 32.09 0 1805600..1806643 + 347 150016409 ruvB Cbei_1531 - Holliday junction DNA helicase B 1518 31.87 0 1806772..1807797 + 341 150016410 queA Cbei_1532 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1519 34.30 +1 1807991..1809127 + 378 150016411 tgt Cbei_1533 - queuine tRNA-ribosyltransferase 1520 29.03 0 1809288..1809566 + 92 150016412 yajC Cbei_1534 - preprotein translocase subunit YajC 1521 28.46 0 1809618..1809986 + 122 150016413 - Cbei_1535 - membrane protein 1522 32.94 0 1810358..1811623 + 421 150016414 secD Cbei_1536 - preprotein translocase subunit SecD 1523 30.25 0 1811616..1812491 + 291 150016415 secF Cbei_1537 - preprotein translocase subunit SecF 1524 27.51 0 1812615..1813490 + 291 150016416 - Cbei_1538 - phosphoesterase domain-containing protein 1525 33.14 0 1813581..1814099 + 172 150016417 - Cbei_1539 - adenine phosphoribosyltransferase 1526 32.16 0 1814444..1816660 + 738 150016418 - Cbei_1540 - (p)ppGpp synthetase I, SpoT/RelA 1527 31.56 0 1816692..1817141 + 149 150016419 - Cbei_1541 - D-tyrosyl-tRNA deacylase 1528 33.00 0 1817154..1817750 + 198 150016420 - Cbei_1542 - beta-lactamase domain-containing protein 1529 29.34 0 1817796..1819223 + 475 150016421 - Cbei_1543 - coproporphyrinogen III oxidase 1530 32.30 0 1819283..1820536 + 417 150016422 hisS Cbei_1544 - histidyl-tRNA synthetase 1531 32.17 0 1820568..1822367 + 599 150016423 aspS Cbei_1545 - aspartyl-tRNA synthetase 1532 29.80 0 1822502..1823209 - 235 150016424 - Cbei_1546 - hypothetical protein 1533 31.04 0 1823963..1824661 + 232 150016425 - Cbei_1549 - hypothetical protein 1534 30.20 0 1824720..1825325 + 201 150016426 - Cbei_1550 - hypothetical protein 1535 32.72 0 1825670..1826965 + 431 150016427 - Cbei_1551 - homoserine dehydrogenase 1536 28.36 0 1827233..1828579 + 448 150016428 - Cbei_1552 - hypothetical protein 1537 27.42 0 1828656..1830497 + 613 150016429 - Cbei_1553 - multi-sensor signal transduction histidine kinase 1538 31.60 0 1831095..1832711 + 538 150016430 - Cbei_1554 - hypothetical protein 1539 31.41 0 1832877..1833032 + 51 150016431 - Cbei_1555 - hypothetical protein 1540 31.37 0 1833149..1833301 - 50 150016432 - Cbei_1556 - hypothetical protein 1541 26.88 -1 1833534..1834013 - 159 150016433 - Cbei_1557 - CarD family transcriptional regulator 1542 23.99 -2 1834368..1835180 + 270 150016434 - Cbei_1558 - hypothetical protein 1543 31.24 0 1835368..1835988 + 206 150016435 - Cbei_1559 - uridine kinase 1544 32.28 0 1836113..1836778 + 221 150016436 - Cbei_1560 - HAD family hydrolase 1545 29.27 0 1836811..1837425 + 204 150016437 - Cbei_1561 - hypothetical protein 1546 36.12 +1 1837552..1838772 - 406 150016438 - Cbei_1562 - threonine dehydratase 1547 33.33 0 1839105..1839527 - 140 150016439 - Cbei_1563 - hypothetical protein 1548 31.73 0 1839850..1841406 - 518 150016440 - Cbei_1564 - ABC transporter related 1549 29.35 0 1841872..1842423 + 183 150016441 - Cbei_1565 - GCN5-related N-acetyltransferase 1550 31.15 0 1842718..1842900 + 60 150016442 - Cbei_1566 - hypothetical protein 1551 28.65 0 1843006..1843710 - 234 150016443 - Cbei_1567 - hypothetical protein 1552 24.11 -2 1843936..1844835 + 299 150016444 - Cbei_1568 - sporulation protein YtxC 1553 32.08 0 1844970..1845527 + 185 150016445 - Cbei_1569 - translation initiation factor IF-3 1554 31.31 0 1845548..1845745 + 65 150016446 rpmI Cbei_1570 - 50S ribosomal protein L35 1555 29.44 0 1845774..1846133 + 119 150016447 rplT Cbei_1571 - 50S ribosomal protein L20 1556 30.40 0 1846234..1847016 + 260 150016448 - Cbei_1572 - tRNA/rRNA methyltransferase (SpoU) 1557 32.94 0 1847717..1848736 + 339 150016449 pheS Cbei_1573 - phenylalanyl-tRNA synthetase subunit alpha 1558 31.36 0 1848951..1851329 + 792 150016450 pheT Cbei_1574 - phenylalanyl-tRNA synthetase subunit beta 1559 32.87 0 1851547..1851975 + 142 150016451 - Cbei_1575 - cell division protein MraZ 1560 31.08 0 1851988..1852920 + 310 150016452 mraW Cbei_1576 - S-adenosyl-methyltransferase MraW 1561 26.18 -1 1852938..1853468 + 176 150016453 - Cbei_1577 - hypothetical protein 1562 34.32 +1 1853613..1855841 + 742 150016454 - Cbei_1578 - stage V sporulation protein D 1563 33.33 0 1856073..1858337 + 754 150016455 - Cbei_1579 - stage V sporulation protein D 1564 28.68 0 1858635..1860095 + 486 150016456 murE Cbei_1580 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1565 29.42 0 1860192..1861544 + 450 150016457 - Cbei_1581 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 1566 30.17 0 1861648..1862628 + 326 150016458 - Cbei_1582 - phospho-N-acetylmuramoyl-pentapeptide-transferase 1567 34.30 +1 1862658..1863794 + 378 150016459 - Cbei_1583 - stage V sporulation protein E 1568 26.51 -1 1863985..1864746 + 253 150016460 - Cbei_1584 - polypeptide-transport-associated domain-containing protein 1569 30.73 0 1864754..1865482 + 242 150016461 - Cbei_1585 - hypothetical protein 1570 30.53 0 1865495..1865887 + 130 150016462 - Cbei_1586 - hypothetical protein 1571 30.48 0 1865900..1866634 + 244 150016463 - Cbei_1587 - hypothetical protein 1572 28.78 0 1866727..1867407 + 226 150016464 - Cbei_1588 - alanine racemase domain-containing protein 1573 31.79 0 1867400..1867852 + 150 150016465 - Cbei_1589 - hypothetical protein 1574 26.67 -1 1867865..1868119 + 84 150016466 - Cbei_1590 - protein of unknown function YGGT 1575 26.80 -1 1868123..1868887 + 254 150016467 - Cbei_1591 - RNA-binding S4 domain-containing protein 1576 28.14 0 1868901..1869536 + 211 150016468 - Cbei_1592 - DivIVA family protein 1577 30.82 0 1869981..1870736 - 251 150016469 - Cbei_1593 - OmpA/MotB domain-containing protein 1578 34.63 +1 1870749..1871522 - 257 150016470 - Cbei_1594 - MotA/TolQ/ExbB proton channel 1579 31.15 0 1871817..1872734 + 305 150016471 - Cbei_1595 - RluA family pseudouridine synthase 1580 29.42 0 1872752..1873288 + 178 150016472 - Cbei_1596 - pyrimidine regulatory protein PyrR 1581 31.27 0 1873312..1874472 + 386 150016473 - Cbei_1597 - putative RNA methylase 1582 30.61 0 1874836..1875681 + 281 150016474 - Cbei_1598 - RpiR family transcriptional regulator 1583 25.03 -1 1875754..1877487 - 577 150016475 - Cbei_1599 - fibronectin-binding A domain-containing protein 1584 32.25 0 1877917..1878744 + 275 150016476 - Cbei_1600 - diaminopimelate epimerase 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0