version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1453 33.00 0 1727494..1728384 + 296 150016345 - Cbei_1465 - ferredoxin--NADP(+) reductase subunit alpha 1454 36.27 +1 1728384..1729778 + 464 150016346 - Cbei_1466 - putative oxidoreductase 1455 27.33 -1 1729997..1730779 + 260 150016347 - Cbei_1467 - metal dependent phosphohydrolase 1456 35.06 +1 1731169..1732038 + 289 150016348 - Cbei_1468 - cation diffusion facilitator family transporter 1457 28.26 0 1732207..1732659 + 150 150016349 - Cbei_1469 - hypothetical protein 1458 33.99 +1 1732714..1733478 - 254 150016350 - Cbei_1470 - extradiol ring-cleavage dioxygenase III subunit B 1459 34.30 +1 1733667..1733975 + 102 150016351 - Cbei_1471 - HxlR family transcriptional regulator 1460 33.00 0 1734309..1734908 + 199 150016352 - Cbei_1472 - nitroreductase family protein 1461 33.74 0 1736012..1737469 - 485 150016353 - Cbei_1473 - transposase 1462 32.60 0 1737852..1739210 - 452 150016354 - Cbei_1474 - branched-chain amino acid transport system II carrier protein 1463 30.67 0 1739835..1740209 + 124 150016355 - Cbei_1475 - phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit 1464 35.29 +1 1740279..1740584 + 101 150016356 - Cbei_1476 - phosphotransferase system, lactose/cellobiose-specific IIB subunit 1465 32.62 0 1740626..1742035 + 469 150016357 - Cbei_1477 - Beta-glucosidase 1466 35.14 +1 1742164..1743492 + 442 150016358 - Cbei_1478 - PTS system lactose/cellobiose family IIC subunit 1467 29.12 0 1743656..1744414 + 252 150016359 - Cbei_1479 - RpiR family transcriptional regulator 1468 29.97 0 1744554..1745297 - 247 150016360 - Cbei_1480 - LytTR family two component transcriptional regulator 1469 30.10 0 1745315..1745716 - 133 150016361 - Cbei_1481 - hypothetical protein 1470 35.76 +1 1745738..1746724 - 328 150016362 - Cbei_1482 - hypothetical protein 1471 33.13 0 1746751..1747248 - 165 150016363 - Cbei_1483 - hypothetical protein 1472 28.65 0 1747395..1748249 - 284 150016364 - Cbei_1484 - signal transduction histidine kinase regulating citrate/malate metabolism 1473 31.48 0 1748808..1750046 + 412 150016365 - Cbei_1485 - GCN5-related N-acetyltransferase 1474 29.47 0 1750387..1751343 - 318 150016366 - Cbei_1486 - hypothetical protein 1475 26.11 -1 1752901..1756155 + 1084 150016367 - Cbei_1488 - pentapeptide repeat-containing protein 1476 28.21 0 1756557..1757669 + 370 150016368 - Cbei_1489 - hypothetical protein 1477 25.24 -1 1757662..1761852 + 1396 150016369 - Cbei_1490 - hypothetical protein 1478 28.24 0 1761908..1763086 - 392 150016370 - Cbei_1491 - phage integrase family protein 1479 24.70 -1 1763161..1763751 - 196 150016371 - Cbei_1492 - XRE family transcriptional regulator 1480 35.88 +1 1763956..1764741 + 261 150016372 - Cbei_1493 - cell wall hydrolase/autolysin 1481 36.80 +1 1765729..1766421 + 230 150016373 - Cbei_1494 - hypothetical protein 1482 39.42 +2 1766447..1767448 + 333 150016374 - Cbei_1495 - hypothetical protein 1483 29.73 0 1769779..1770111 + 110 150016375 - Cbei_1497 - TfoX domain-containing protein 1484 25.66 -1 1770126..1770542 + 138 150016376 - Cbei_1498 - hypothetical protein 1485 26.67 -1 1770542..1770916 + 124 150016377 - Cbei_1499 - hypothetical protein 1486 27.12 -1 1771147..1771677 + 176 150016378 - Cbei_1500 - PadR-like family transcriptional regulator 1487 32.96 0 1771707..1773044 + 445 150016379 - Cbei_1501 - glycosyl transferase 1488 34.89 +1 1773060..1773380 + 106 150016380 - Cbei_1502 - carboxymuconolactone decarboxylase 1489 22.55 -2 1774189..1774392 + 67 150016381 - Cbei_1503 - hypothetical protein 1490 36.34 +1 1775004..1775801 + 265 150016382 - Cbei_1504 - hypothetical protein 1491 28.35 0 1776063..1777307 + 414 150016383 - Cbei_1505 - natural resistance-associated macrophage protein 1492 29.98 0 1777662..1778645 + 327 150016384 - Cbei_1506 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1493 30.73 0 1778738..1779352 + 204 150016385 - Cbei_1507 - superoxide dismutase 1494 30.88 0 1779445..1780545 - 366 150016386 - Cbei_1508 - hypothetical protein 1495 29.29 0 1780675..1781391 - 238 150016387 - Cbei_1509 - hypothetical protein 1496 37.64 +2 1781864..1783534 - 556 150016388 - Cbei_1510 - dihydroxy-acid dehydratase 1497 32.02 0 1783676..1784362 - 228 150016389 - Cbei_1511 - GntR domain-containing protein 1498 32.16 0 1785175..1786113 - 312 150016390 - Cbei_1512 - auxin efflux carrier 1499 26.43 -1 1786179..1786859 - 226 150016391 - Cbei_1513 - GntR family transcriptional regulator 1500 45.70 +2 1787065..1787250 - 61 150016392 - Cbei_1514 - hypothetical protein 1501 30.69 0 1787711..1789753 + 680 150016393 - Cbei_1515 - hypothetical protein 1502 31.96 0 1790009..1790734 + 241 150016394 - Cbei_1516 - ABC transporter related 1503 29.12 0 1790727..1792364 + 545 150016395 - Cbei_1517 - uncharacterized membrane protein, putative 1504 34.34 +1 1792567..1792764 + 65 150016396 - Cbei_1518 - thiamine biosynthesis protein ThiS 1505 37.35 +2 1792970..1793740 + 256 150016397 thiG Cbei_1519 - thiazole synthase 1506 35.14 +1 1793751..1794911 + 386 150016398 thiH Cbei_1520 - thiamine biosynthesis protein ThiH 1507 30.26 0 1795087..1795737 - 216 150016399 - Cbei_1521 - TetR family transcriptional regulator 1508 34.32 +1 1796024..1797547 + 507 150016400 - Cbei_1522 - EmrB/QacA family drug resistance transporter 1509 27.53 0 1797706..1798170 + 154 150016401 - Cbei_1523 - CBS domain-containing protein 1510 33.49 0 1798317..1799588 - 423 150016402 - Cbei_1524 - sodium:dicarboxylate symporter 1511 30.24 0 1800639..1801253 + 204 150016403 - Cbei_1525 - hypothetical protein 1512 31.33 0 1801317..1801814 + 165 150016404 - Cbei_1526 - ErfK/YbiS/YcfS/YnhG family protein 1513 28.51 0 1802425..1803294 + 289 150016405 - Cbei_1527 - radical SAM domain-containing protein 1514 27.89 0 1803311..1804045 + 244 150016406 - Cbei_1528 - hypothetical protein 1515 22.98 -2 1804164..1804733 + 189 150016407 - Cbei_1529 - hypothetical protein 1516 33.17 0 1804938..1805534 + 198 150016408 ruvA Cbei_1530 - Holliday junction DNA helicase motor protein 1517 32.09 0 1805600..1806643 + 347 150016409 ruvB Cbei_1531 - Holliday junction DNA helicase B 1518 31.87 0 1806772..1807797 + 341 150016410 queA Cbei_1532 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1519 34.30 +1 1807991..1809127 + 378 150016411 tgt Cbei_1533 - queuine tRNA-ribosyltransferase 1520 29.03 0 1809288..1809566 + 92 150016412 yajC Cbei_1534 - preprotein translocase subunit YajC 1521 28.46 0 1809618..1809986 + 122 150016413 - Cbei_1535 - membrane protein 1522 32.94 0 1810358..1811623 + 421 150016414 secD Cbei_1536 - preprotein translocase subunit SecD 1523 30.25 0 1811616..1812491 + 291 150016415 secF Cbei_1537 - preprotein translocase subunit SecF 1524 27.51 0 1812615..1813490 + 291 150016416 - Cbei_1538 - phosphoesterase domain-containing protein 1525 33.14 0 1813581..1814099 + 172 150016417 - Cbei_1539 - adenine phosphoribosyltransferase 1526 32.16 0 1814444..1816660 + 738 150016418 - Cbei_1540 - (p)ppGpp synthetase I, SpoT/RelA 1527 31.56 0 1816692..1817141 + 149 150016419 - Cbei_1541 - D-tyrosyl-tRNA deacylase 1528 33.00 0 1817154..1817750 + 198 150016420 - Cbei_1542 - beta-lactamase domain-containing protein 1529 29.34 0 1817796..1819223 + 475 150016421 - Cbei_1543 - coproporphyrinogen III oxidase 1530 32.30 0 1819283..1820536 + 417 150016422 hisS Cbei_1544 - histidyl-tRNA synthetase 1531 32.17 0 1820568..1822367 + 599 150016423 aspS Cbei_1545 - aspartyl-tRNA synthetase 1532 29.80 0 1822502..1823209 - 235 150016424 - Cbei_1546 - hypothetical protein 1533 31.04 0 1823963..1824661 + 232 150016425 - Cbei_1549 - hypothetical protein 1534 30.20 0 1824720..1825325 + 201 150016426 - Cbei_1550 - hypothetical protein 1535 32.72 0 1825670..1826965 + 431 150016427 - Cbei_1551 - homoserine dehydrogenase 1536 28.36 0 1827233..1828579 + 448 150016428 - Cbei_1552 - hypothetical protein 1537 27.42 0 1828656..1830497 + 613 150016429 - Cbei_1553 - multi-sensor signal transduction histidine kinase 1538 31.60 0 1831095..1832711 + 538 150016430 - Cbei_1554 - hypothetical protein 1539 31.41 0 1832877..1833032 + 51 150016431 - Cbei_1555 - hypothetical protein 1540 31.37 0 1833149..1833301 - 50 150016432 - Cbei_1556 - hypothetical protein 1541 26.88 -1 1833534..1834013 - 159 150016433 - Cbei_1557 - CarD family transcriptional regulator 1542 23.99 -2 1834368..1835180 + 270 150016434 - Cbei_1558 - hypothetical protein 1543 31.24 0 1835368..1835988 + 206 150016435 - Cbei_1559 - uridine kinase 1544 32.28 0 1836113..1836778 + 221 150016436 - Cbei_1560 - HAD family hydrolase 1545 29.27 0 1836811..1837425 + 204 150016437 - Cbei_1561 - hypothetical protein 1546 36.12 +1 1837552..1838772 - 406 150016438 - Cbei_1562 - threonine dehydratase 1547 33.33 0 1839105..1839527 - 140 150016439 - Cbei_1563 - hypothetical protein 1548 31.73 0 1839850..1841406 - 518 150016440 - Cbei_1564 - ABC transporter related 1549 29.35 0 1841872..1842423 + 183 150016441 - Cbei_1565 - GCN5-related N-acetyltransferase 1550 31.15 0 1842718..1842900 + 60 150016442 - Cbei_1566 - hypothetical protein 1551 28.65 0 1843006..1843710 - 234 150016443 - Cbei_1567 - hypothetical protein 1552 24.11 -2 1843936..1844835 + 299 150016444 - Cbei_1568 - sporulation protein YtxC 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0