version 1.0
Clostridium beijerinckii NCIMB 8052, complete genome - 1..6000632 5020 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 80 31.52 0 104320..104595 + 91 150014972 - Cbei_0080 - SpoVG family protein 81 31.58 0 104791..106158 + 455 150014973 - Cbei_0081 - UDP-N-acetylglucosamine pyrophosphorylase 82 34.27 +1 106206..107171 + 321 150014974 - Cbei_0082 - ribose-phosphate pyrophosphokinase 83 30.28 0 107490..108176 + 228 150014975 - Cbei_0083 - two component transcriptional regulator 84 28.27 0 108177..109598 + 473 150014976 - Cbei_0084 - integral membrane sensor signal transduction histidine kinase 85 31.60 0 109621..110196 + 191 150014977 - Cbei_0085 - peptidyl-tRNA hydrolase 86 31.05 0 110211..113711 + 1166 150014978 - Cbei_0086 - transcription-repair coupling factor 87 31.22 0 113945..115033 + 362 150014979 prsA Cbei_0087 - peptidylprolyl isomerase 88 33.33 0 115288..115836 + 182 150014980 - Cbei_0088 - AbrB family transcriptional regulator 89 29.88 0 115932..117467 + 511 150014981 - Cbei_0089 - polysaccharide biosynthesis protein 90 30.17 0 117485..118936 + 483 150014982 - Cbei_0090 - MazG family protein 91 31.52 0 119157..119432 + 91 150014983 - Cbei_0091 - histone family protein DNA-binding protein 92 32.18 0 119503..119763 + 86 150014984 - Cbei_0092 - RNA-binding S4 domain-containing protein 93 28.57 0 119967..120260 + 97 150014985 - Cbei_0093 - YabP family protein 94 22.39 -2 120270..120662 + 130 150014986 - Cbei_0094 - spore cortex biosynthesis protein YabQ 95 28.12 0 120740..121027 + 95 150014987 - Cbei_0095 - septum formation initiator 96 32.60 0 121177..121587 + 136 150014988 - Cbei_0096 - hypothetical protein 97 30.64 0 123521..125932 + 803 150014989 - Cbei_0097 - sporulation stage II, protein E 98 27.36 -1 126199..127605 + 468 150014990 - Cbei_0098 - tRNA(Ile)-lysidine synthetase 99 28.52 0 127608..128147 + 179 150014991 - Cbei_0099 - hypoxanthine phosphoribosyltransferase 100 35.10 +1 128222..130030 + 602 150014992 - Cbei_0100 - ATP-dependent metalloprotease FtsH 101 34.11 +1 130234..131904 + 556 150014993 - Cbei_0101 - formate--tetrahydrofolate ligase 102 30.09 0 132096..132896 + 266 150014994 - Cbei_0102 - pantothenate kinase 103 33.54 0 132946..133911 + 321 150014995 - Cbei_0103 - nifR3 family TIM-barrel protein 104 30.43 0 134393..134875 + 160 150014996 - Cbei_0104 - transcription elongation factor GreA 105 32.93 0 134890..136395 + 501 150014997 lysS Cbei_0105 - lysyl-tRNA synthetase 106 32.76 0 137905..139296 + 463 150014998 - Cbei_0106 - glycyl-tRNA synthetase 107 32.90 0 139445..140821 + 458 150014999 murD Cbei_0107 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 108 29.03 0 140884..141906 - 340 150015000 - Cbei_0108 - hypothetical protein 109 35.19 +1 148303..149700 + 465 150015001 - Cbei_0109 - sugar transporter 110 27.22 -1 149740..150687 - 315 150015002 - Cbei_0110 - Mg2+ transporter protein, CorA family protein 111 31.01 0 150965..152125 - 386 150015003 - Cbei_0111 - amidohydrolase-like protein 112 28.96 0 152532..152714 + 60 150015004 - Cbei_0112 - hypothetical protein 113 30.53 0 152764..153405 + 213 150015005 - Cbei_0113 - dTMP kinase 114 35.44 +1 153479..153811 + 110 150015006 - Cbei_0114 - hypothetical protein 115 25.94 -1 153831..154763 + 310 150015007 - Cbei_0115 - DNA polymerase III subunit delta' 116 31.24 0 154767..155672 + 301 150015008 - Cbei_0116 - PSP1 domain-containing protein 117 28.43 0 155684..155887 + 67 150015009 - Cbei_0117 - metal-binding protein of ferredoxin fold 118 41.52 +2 156010..156180 + 56 150015010 - Cbei_0118 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 119 28.57 0 156237..156887 - 216 150015011 - Cbei_0119 - zinc-dependent hydrolase 120 29.82 0 157057..157512 + 151 150015012 - Cbei_0120 - transcriptional repressor, CtsR 121 27.63 0 157527..158105 + 192 150015013 - Cbei_0121 - UvrB/UvrC protein 122 28.01 0 158098..159111 + 337 150015014 - Cbei_0122 - ATP:guanido phosphotransferase 123 32.20 0 159137..161611 + 824 150015015 - Cbei_0123 - ATPase 124 33.01 0 161742..162677 + 311 150015016 - Cbei_0124 - thioredoxin reductase 125 28.51 0 162753..162980 - 75 150015017 - Cbei_0125 - YruB family glutaredoxin-like protein 126 33.48 0 163466..164842 + 458 150015018 - Cbei_0126 - DNA repair protein RadA 127 31.64 0 165081..166145 + 354 150015019 - Cbei_0127 - DNA integrity scanning protein DisA 128 27.97 0 166388..167488 + 366 150015020 - Cbei_0128 - PilT domain-containing protein 129 30.10 0 167510..168190 + 226 150015021 ispD Cbei_0129 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 130 33.63 0 168583..170295 + 570 150015022 - Cbei_0130 - prolyl-tRNA synthetase 131 32.12 0 170313..171713 + 466 150015023 cysS Cbei_0131 - cysteinyl-tRNA synthetase 132 30.92 0 171763..172176 + 137 150015024 - Cbei_0132 - ribonuclease III 133 31.89 0 172207..173109 + 300 150015025 - Cbei_0133 - RNA methyltransferase 134 28.46 0 173123..173635 + 170 150015026 - Cbei_0134 - hypothetical protein 135 31.85 0 173671..174342 + 223 150015027 - Cbei_0135 - RNA polymerase factor sigma-70 136 37.19 +2 174560..175753 + 397 150015028 - Cbei_0136 - elongation factor Tu 137 27.33 -1 175931..176080 + 49 150015029 rpmG Cbei_0137 - 50S ribosomal protein L33 138 29.00 0 176129..176359 + 76 150015030 secE Cbei_0138 - preprotein translocase subunit SecE 139 36.26 +1 176373..176918 + 181 150015031 nusG Cbei_0139 - transcription antitermination protein NusG 140 36.62 +1 176997..177422 + 141 150015032 - Cbei_0140 - ribosomal protein L11 141 35.94 +1 177477..178166 + 229 150015033 rplA Cbei_0141 - 50S ribosomal protein L1 142 31.35 0 178369..178872 + 167 150015034 rplJ Cbei_0142 - 50S ribosomal protein L10 143 36.89 +1 178924..179289 + 121 150015035 - Cbei_0143 - ribosomal protein L7/L12 144 33.98 +1 179620..183330 + 1236 150015036 rpoB Cbei_0144 - DNA-directed RNA polymerase subunit beta 145 34.55 +1 183352..186888 + 1178 150015037 - Cbei_0145 - DNA-directed RNA polymerase subunit beta' 146 37.83 +2 187145..187522 + 125 150015038 rpsL Cbei_0146 - 30S ribosomal protein S12 147 34.61 +1 187672..188142 + 156 150015039 - Cbei_0147 - 30S ribosomal protein S7 148 35.17 +1 188226..190292 + 688 150015040 - Cbei_0148 - elongation factor G 149 37.27 +2 190480..191673 + 397 150015041 - Cbei_0149 - elongation factor Tu 150 32.36 0 192128..192436 + 102 150015042 rpsJ Cbei_0150 - 30S ribosomal protein S10 151 34.13 +1 192509..193138 + 209 150015043 rplC Cbei_0151 - 50S ribosomal protein L3 152 33.33 0 193165..193785 + 206 150015044 rplD Cbei_0152 - 50S ribosomal protein L4 153 32.66 0 193785..194081 + 98 150015045 rplW Cbei_0153 - 50S ribosomal protein L23 154 36.33 +1 194146..194979 + 277 150015046 rplB Cbei_0154 - 50S ribosomal protein L2 155 32.97 0 195045..195317 + 90 150015047 rpsS Cbei_0155 - 30S ribosomal protein S19 156 30.95 0 195338..195673 + 111 150015048 rplV Cbei_0156 - 50S ribosomal protein L22 157 33.33 0 195698..196363 + 221 150015049 rpsC Cbei_0157 - 30S ribosomal protein S3 158 36.78 +1 196381..196815 + 144 150015050 rplP Cbei_0158 - 50S ribosomal protein L16 159 29.58 0 196815..197027 + 70 150015051 - Cbei_0159 - ribosomal protein L29 160 29.41 0 197051..197305 + 84 150015052 rpsQ Cbei_0160 - 30S ribosomal protein S17 161 34.42 +1 197334..197702 + 122 150015053 rplN Cbei_0161 - 50S ribosomal protein L14 162 30.79 0 197718..198032 + 104 150015054 rplX Cbei_0162 - 50S ribosomal protein L24 163 32.78 0 198055..198594 + 179 150015055 rplE Cbei_0163 - 50S ribosomal protein L5 164 35.48 +1 198611..198796 + 61 150015056 rpsN Cbei_0164 - 30S ribosomal protein S14 165 32.33 0 198829..199227 + 132 150015057 rpsH Cbei_0165 - 30S ribosomal protein S8 166 34.25 +1 199296..199838 + 180 150015058 rplF Cbei_0166 - 50S ribosomal protein L6 167 35.00 +1 199857..200216 + 119 150015059 rplR Cbei_0167 - 50S ribosomal protein L18 168 37.35 +2 200237..200734 + 165 150015060 rpsE Cbei_0168 - 30S ribosomal protein S5 169 30.56 0 200747..200926 + 59 150015061 rpmD Cbei_0169 - 50S ribosomal protein L30 170 36.73 +1 200948..201388 + 146 150015062 rplO Cbei_0170 - 50S ribosomal protein L15 171 32.56 0 201390..202688 + 432 150015063 secY Cbei_0171 - preprotein translocase subunit SecY 172 34.41 +1 202714..203364 + 216 150015064 adk Cbei_0172 - adenylate kinase 173 35.60 +1 203364..204113 + 249 150015065 - Cbei_0173 - methionine aminopeptidase, type I 174 29.08 0 204201..204482 + 93 150015066 - Cbei_0174 - hypothetical protein 175 31.96 0 204490..204708 + 72 150015067 - Cbei_0175 - translation initiation factor IF-1 176 34.21 +1 204763..204876 + 37 150015068 rpmJ Cbei_0176 - 50S ribosomal protein L36 177 30.62 0 205100..205468 + 122 150015069 rpsM Cbei_0177 - 30S ribosomal protein S13 178 37.88 +2 205484..205879 + 131 150015070 - Cbei_0178 - 30S ribosomal protein S11 179 31.72 0 205910..206530 + 206 150015071 rpsD Cbei_0179 - 30S ribosomal protein S4 30.63 MEAN 3.23 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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