IslandPath Analysis: Chlamydophila pneumoniae TW-183



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 40.62   STD DEV: 3.18
Chlamydophila pneumoniae TW-183, complete genome - 1..1225935
1113 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
148	 46.22	+1	180720..181169	+	149	33241483	-	CpB0148	-	hypothetical protein
149	 40.70	0	181341..183200	+	619	33241484	-	CpB0149	-	protein kinase
150	 41.48	0	183210..185198	+	662	33241485	ligA	CpB0150	-	NAD-dependent DNA ligase LigA
151	 40.75	0	185329..189942	+	1537	33241486	-	CpB0151	-	hypothetical protein
152	 39.18	0	190117..191637	-	506	33241487	-	CpB0152	-	pentachlorophenol 4-monooxygenase
153	 42.17	0	191810..192760	-	316	33241488	-	CpB0153	-	hypothetical protein
154	 42.63	0	192928..195390	+	820	33241489	leuS	CpB0154	-	leucyl-tRNA synthetase
155	 39.65	0	195387..196700	+	437	33241490	-	CpB0155	-	3-deoxy-D-manno-octulosonic-acid transferase
156	 30.92	-2	196980..197186	-	68	33241491	-	CpB0156	-	hypothetical protein
157	 37.20	-1	197262..197804	-	180	33241492	-	CpB0157	-	kdtA KDO-transferase
158	 38.69	0	197791..198219	-	142	33241493	-	CpB0158	-	hypothetical protein
159	 37.41	-1	198387..198926	-	179	33241494	-	CpB0159	-	KDO-transferase
160	 40.45	0	198960..199268	-	102	33241495	-	CpB0160	-	hypothetical protein
161	 39.51	0	199564..201198	-	544	33241496	-	CpB0161	-	diphosphate--fructose-6-phosphate 1-phosphotransferase
162	 40.34	0	201202..202029	-	275	33241497	cinI	CpB0162	-	cinnamoyl ester hydrolase
163	 37.03	-1	202207..203235	-	342	33241498	-	CpB0163	-	hypothetical protein
164	 42.74	0	203433..203804	+	123	33241499	-	CpB0164	-	hypothetical protein
165	 32.26	-2	203851..204408	+	185	33241500	-	CpB0165	-	hypothetical protein
166	 36.73	-1	204405..204992	+	195	33241501	-	CpB0166	-	hypothetical protein
167	 33.33	-2	205037..205372	+	111	33241502	-	CpB0167	-	hypothetical protein
168	 39.64	0	205381..205713	-	110	33241503	-	CpB0168	-	hypothetical protein
169	 39.91	0	205821..206048	-	75	33241504	-	CpB0169	-	hypothetical protein
170	 37.36	-1	206114..206908	-	264	33241505	-	CpB0170	-	hypothetical protein
171	 29.49	-2	207058..207213	+	51	33241506	-	CpB0171	-	hypothetical protein
172	 38.91	0	207429..208433	-	334	33241507	-	CpB0172	-	hypothetical protein
173	 41.16	0	208553..209842	-	429	33241508	-	CpB0173	-	GMP synthase
174	 42.11	0	209844..210584	-	246	33241509	-	CpB0174	-	guaB gene for inosine 5-monophosphase dehydrogenase subunit
175	 37.50	0	210645..210908	-	87	33241510	-	CpB0175	-	guaB gene for inosine 5-monophosphase dehydrogenase subunit
176	 37.68	0	211119..211394	-	91	33241511	-	CpB0176	-	hypothetical protein
177	 39.80	0	211640..212134	+	164	33241512	-	CpB0177	-	hypothetical protein
178	 39.90	0	212305..212685	+	126	33241513	-	CpB0178	-	hypothetical protein
179	 37.94	0	212693..213928	+	411	33241514	-	CpB0179	-	hypothetical protein
180	 40.47	0	214012..214866	-	284	33241515	-	CpB0180	-	hypothetical protein
181	 40.82	0	215193..215459	-	88	33241516	-	CpB0181	-	hypothetical protein
182	 38.75	0	215460..215810	-	116	33241517	-	CpB0182	-	hypothetical protein
183	 38.38	0	215759..216313	-	184	33241518	-	CpB0183	-	hypothetical protein
184	 36.32	-1	216181..216582	-	133	33241519	-	CpB0184	-	hypothetical protein
185	 39.56	0	216738..218102	-	454	33241520	-	CpB0185	-	acetyl-CoA carboxylase biotin carboxylase subunit
186	 39.09	0	218099..218602	-	167	33241521	-	CpB0186	-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
187	 37.28	-1	218625..219182	-	185	33241522	-	CpB0187	-	elongation factor P
188	 38.41	0	219169..219858	-	229	33241523	-	CpB0188	-	ribulose-phosphate 3-epimerase
189	 40.92	0	220306..221478	+	390	33241524	-	CpB0189	-	inclusion membrane protein A
190	 39.20	0	221655..222455	+	266	33241525	-	CpB0190	-	hypothetical protein
191	 38.05	0	222518..223810	+	430	33241526	-	CpB0191	-	hypothetical protein
192	 39.87	0	223807..227235	+	1142	33241527	-	CpB0192	-	hypothetical protein
193	 40.25	0	227326..228684	+	452	33241528	-	CpB0193	-	hypothetical protein
194	 41.70	0	228718..229398	-	226	33241529	-	CpB0194	-	amino acid transport ATP-binding protein
195	 35.47	-1	229388..230041	-	217	33241530	-	CpB0195	-	ABC amino acid transporter permease
196	 42.34	0	230090..230533	-	147	33241531	-	CpB0196	-	arginine repressor protein
197	 41.55	0	230617..231651	+	344	33241532	-	CpB0197	-	O-sialoglycoprotein endopeptidase
198	 40.71	0	231597..233195	+	532	33241533	-	CpB0198	-	oligopeptide ABC transport system substrate-binding protein oppA precursor
199	 40.03	0	233346..234929	+	527	33241534	-	CpB0199	-	oligopeptide ABC transport system substrate-binding protein oppA precursor
200	 41.44	0	234985..236292	+	435	33241535	-	CpB0200	-	oligopeptide ABC transport system substrate-binding protein oppA precursor
201	 40.01	0	236570..238156	+	528	33241536	-	CpB0201	-	dipeptide ABC transporter
202	 39.15	0	238449..239393	+	314	33241537	oppB	CpB0202	-	oligopeptide transport system permease protein
203	 42.81	0	239424..240278	+	284	33241538	oppC	CpB0203	-	oligopeptide ABC transporter (permease)
204	 40.12	0	240271..241125	+	284	33241539	oppD	CpB0204	-	oligopeptide transport ATP-binding protein
205	 41.06	0	241122..241910	+	262	33241540	oppF	CpB0205	-	oligopeptide transport protein
206	 33.33	-2	242017..242199	+	60	33241541	-	CpB0206	-	hypothetical protein
207	 36.59	-1	242415..243212	+	265	33241542	-	CpB0207	-	hypothetical protein
208	 36.51	-1	243224..243412	+	62	33241543	-	CpB0208	-	hypothetical protein
209	 31.31	-2	243540..243737	+	65	33241544	-	CpB0209	-	hypothetical protein
210	 42.33	0	243816..244571	+	251	33241545	-	CpB0210	-	hypothetical protein
211	 45.51	+1	244615..246027	+	470	33241546	-	CpB0211	-	2-oxoglutarate/malate translocator precursor
212	 42.04	0	246360..248012	+	550	33241547	-	CpB0212	-	diphosphate--fructose-6-phosphate 1-phosphotransferase
213	 41.06	0	248437..248682	+	81	33241548	-	CpB0213	-	hypothetical protein
214	 38.82	0	248844..249791	-	315	33241549	-	CpB0214	-	hypothetical protein
215	 38.05	0	249867..250163	-	98	33241550	-	CpB0215	-	hypothetical protein
216	 39.11	0	250292..251485	-	397	33241551	-	CpB0216	-	hypothetical protein
217	 30.82	-2	251521..251679	-	52	33241552	-	CpB0217	-	hypothetical protein
218	 36.05	-1	251857..253071	-	404	33241553	-	CpB0218	-	hypothetical protein
219	 39.21	0	253170..254429	-	419	33241554	-	CpB0219	-	hypothetical protein
220	 38.36	0	254585..255022	-	145	33241555	-	CpB0220	-	hypothetical protein
221	 37.85	0	255310..255996	+	228	33241556	-	CpB0221	-	hypothetical protein
222	 34.21	-2	255993..256562	-	189	33241557	-	CpB0222	-	hypothetical protein
223	 44.15	+1	256771..257889	+	372	33241558	-	CpB0223	-	queuine tRNA-ribosyltransferase
224	 41.76	0	258110..258655	+	181	33241559	-	CpB0224	-	hypothetical protein
225	 37.23	-1	259071..259481	+	136	33241560	-	CpB0225	-	hypothetical protein
226	 45.83	+1	259646..259837	-	63	33241561	-	CpB0226	-	hypothetical protein
227	 34.50	-1	259918..260259	+	113	33241562	-	CpB0227	-	hypothetical protein
228	 37.53	0	260370..260750	+	126	33241563	-	CpB0228	-	hypothetical protein
229	 38.68	0	260849..261091	+	80	33241564	-	CpB0229	-	hypothetical protein
230	 40.35	0	261070..261240	+	56	33241565	-	CpB0230	-	hypothetical protein
231	 41.96	0	261287..261958	+	223	33241566	-	CpB0231	-	hypothetical protein
232	 40.25	0	261980..262384	+	134	33241567	-	CpB0232	-	hypothetical protein
233	 38.65	0	262420..262833	-	137	33241568	-	CpB0233	-	putative disulfide oxidoreductase
234	 39.17	0	262823..263524	-	233	33241569	-	CpB0234	-	putative disulfide bond chaperone
235	 40.80	0	263598..264977	+	459	33241570	-	CpB0235	-	hypothetical protein
236	 39.06	0	264987..265667	-	226	33241571	-	CpB0236	-	hypothetical protein
237	 40.96	0	265664..266371	-	235	33241572	-	CpB0237	-	ATP-binding cassette-transport protein
238	 38.48	0	266643..267536	-	297	33241573	-	CpB0238	-	pfs protein
239	 36.21	-1	267659..267832	-	57	33241574	-	CpB0239	-	hypothetical protein
240	 39.51	0	267959..268654	-	231	33241575	-	CpB0240	-	hypothetical protein
241	 40.26	0	268830..269594	+	254	33241576	-	CpB0241	-	3-deoxy-manno-octulosonate cytidylyltransferase
242	 41.64	0	269570..271183	+	537	33241577	-	CpB0242	-	CTP synthetase
243	 39.69	0	271176..271631	+	151	33241578	-	CpB0243	-	Holliday junction resolvase-like protein
244	 39.57	0	271717..273255	+	512	33241579	-	CpB0244	-	glucose-6-phosphate 1-dehydrogenase
245	 36.70	-1	273289..274089	+	266	33241580	-	CpB0245	-	6-phosphogluconolactonase
246	 43.70	0	274109..275275	-	388	33241581	-	CpB0246	-	hypothetical protein
247	 41.39	0	275614..276780	-	388	33241582	-	CpB0247	-	hypothetical protein
40.62	MEAN

3.18	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.