version 1.0
Chlorobium phaeobacteroides BS1, complete genome - 1..2736403 2469 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 843 50.56 0 950128..954000 - 1290 189499843 - Cphamn1_0884 - hypothetical protein 844 40.62 -2 961144..961500 + 118 189499844 - Cphamn1_0888 - hypothetical protein 845 47.64 0 961533..962105 + 190 189499845 - Cphamn1_0889 - transcriptional regulator, XRE family 846 50.84 0 962239..963906 - 555 189499846 - Cphamn1_0890 - filamentation induced by cAMP protein Fic 847 46.05 0 964757..965047 - 96 189499847 - Cphamn1_0891 - transcriptional regulator, AbrB family 848 41.54 -1 965298..965492 + 64 189499848 - Cphamn1_0892 - hypothetical protein 849 48.58 0 965604..967649 + 681 189499849 - Cphamn1_0893 - Radical SAM domain protein 850 49.36 0 967723..968808 - 361 189499850 - Cphamn1_0894 - glutamate 5-kinase 851 47.98 0 969051..970313 - 420 189499851 - Cphamn1_0895 - sodium/hydrogen exchanger 852 42.91 -1 970408..970908 - 166 189499852 - Cphamn1_0896 - ferric uptake regulator, Fur family 853 46.70 0 970970..972607 - 545 189499853 - Cphamn1_0897 - MscS Mechanosensitive ion channel 854 48.21 0 973049..973606 + 185 189499854 - Cphamn1_0898 - peptide deformylase 855 51.68 0 973622..974575 + 317 189499855 - Cphamn1_0899 - methionyl-tRNA formyltransferase 856 49.12 0 974697..976514 + 605 189499856 - Cphamn1_0900 - GTP-binding protein LepA 857 51.70 0 976517..976663 + 48 189499857 - Cphamn1_0901 - hypothetical protein 858 47.71 0 976946..977773 + 275 189499858 - Cphamn1_0902 - signal peptidase I 859 48.58 0 977767..978225 - 152 189499859 - Cphamn1_0903 - hypothetical protein 860 49.40 0 978325..979818 + 497 189499860 - Cphamn1_0904 - anthranilate synthase component I 861 50.63 0 979894..981402 + 502 189499861 - Cphamn1_0905 - protease Do 862 45.34 0 981543..982025 + 160 189499862 - Cphamn1_0906 - transcription elongation factor GreA 863 45.78 0 982049..982273 + 74 189499863 - Cphamn1_0907 - hypothetical protein 864 51.39 0 982279..983031 + 250 189499864 - Cphamn1_0908 - Triose-phosphate isomerase 865 50.53 0 983175..984866 - 563 189499865 - Cphamn1_0909 - thiamine biosynthesis protein ThiC 866 49.79 0 985236..985478 + 80 189499866 - Cphamn1_0910 - Transglycosylase-associated protein 867 48.37 0 985605..986954 + 449 189499867 - Cphamn1_0911 - PUCC protein 868 54.07 +1 987256..988200 + 314 189499868 - Cphamn1_0912 - Radical SAM domain protein 869 40.20 -2 988380..988481 - 33 189499869 - Cphamn1_0913 - hypothetical protein 870 41.86 -1 988799..988927 + 42 189499870 - Cphamn1_0914 - hypothetical protein 871 42.31 -1 989829..989984 + 51 189499871 - Cphamn1_0915 - hypothetical protein 872 56.86 +1 990084..990338 + 84 189499872 - Cphamn1_0916 - hypothetical protein 873 55.45 +1 990488..991744 + 418 189499873 - Cphamn1_0917 - DEAD/DEAH box helicase domain protein 874 51.62 0 991788..992219 - 143 189499874 - Cphamn1_0918 - 6-pyruvoyl tetrahydropterin synthase and hypothetical protein 875 48.57 0 992588..993040 + 150 189499875 - Cphamn1_0919 - peptidase S24 and S26 domain protein 876 52.75 0 993055..994326 + 423 189499876 - Cphamn1_0920 - DNA-directed DNA polymerase 877 53.71 +1 994547..995341 + 264 189499877 - Cphamn1_0921 - serine O-acetyltransferase 878 53.77 +1 995348..996541 - 397 189499878 - Cphamn1_0922 - Chorismate synthase 879 49.65 0 996612..997598 - 328 189499879 - Cphamn1_0923 - Porphobilinogen synthase 880 44.35 -1 998040..1000145 + 701 189499880 - Cphamn1_0924 - integral membrane sensor hybrid histidine kinase 881 43.61 -1 1000595..1001587 + 330 189499881 - Cphamn1_0925 - hypothetical protein 882 46.56 0 1001584..1002891 + 435 189499882 - Cphamn1_0926 - amine oxidase 883 45.72 0 1002888..1005002 + 704 189499883 - Cphamn1_0927 - integral membrane sensor hybrid histidine kinase 884 48.44 0 1005070..1005261 + 63 189499884 - Cphamn1_0928 - hypothetical protein 885 49.01 0 1005266..1006024 + 252 189499885 - Cphamn1_0929 - histidinol-phosphate phosphatase 886 49.52 0 1006078..1007430 + 450 189499886 - Cphamn1_0930 - protein of unknown function DUF195 887 45.96 0 1007455..1007652 + 65 189499887 - Cphamn1_0931 - hypothetical protein 888 48.53 0 1007775..1008524 - 249 189499888 - Cphamn1_0932 - Uroporphyrinogen-III synthase 889 48.83 0 1008524..1009465 - 313 189499889 - Cphamn1_0933 - porphobilinogen deaminase 890 45.36 0 1009494..1010774 - 426 189499890 - Cphamn1_0934 - glutamyl-tRNA reductase 891 43.93 -1 1010892..1011740 - 282 189499891 - Cphamn1_0935 - cytochrome c assembly protein 892 49.04 0 1011899..1013725 + 608 189499892 - Cphamn1_0936 - GTP-binding protein TypA 893 50.04 0 1014004..1015122 - 372 189499893 - Cphamn1_0937 - chlorophyllide reductase iron protein subunit X 894 49.18 0 1015160..1016137 - 325 189499894 - Cphamn1_0938 - chlorophyll synthesis pathway, BchC 895 44.65 -1 1016145..1016621 - 158 189499895 - Cphamn1_0939 - 2-vinyl bacteriochlorophyllide hydratase 896 48.87 0 1016722..1018401 - 559 189499896 - Cphamn1_0940 - extracellular solute-binding protein family 5 897 53.50 +1 1018480..1019421 + 313 189499897 - Cphamn1_0941 - Thioredoxin-disulfide reductase 898 49.57 0 1019415..1020227 - 270 189499898 - Cphamn1_0942 - LmbE family protein 899 50.46 0 1020232..1020669 + 145 189499899 - Cphamn1_0943 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 900 45.46 0 1020737..1022179 - 480 189499900 - Cphamn1_0944 - two component, sigma54 specific, transcriptional regulator, Fis family 901 47.39 0 1022281..1023084 - 267 189499901 - Cphamn1_0945 - hypothetical protein 902 44.74 -1 1023223..1023336 - 37 189499902 - Cphamn1_0946 - hypothetical protein 903 48.68 0 1023455..1024138 - 227 189499903 - Cphamn1_0947 - glycosyl transferase family 2 904 51.83 0 1024135..1024734 - 199 189499904 - Cphamn1_0948 - hypothetical protein 905 49.71 0 1024953..1026314 - 453 189499905 - Cphamn1_0949 - Carotene 7,8-desaturase 906 46.77 0 1026418..1026618 - 66 189499906 - Cphamn1_0950 - hypothetical protein 907 37.11 -2 1026732..1026890 + 52 189499907 - Cphamn1_0951 - hypothetical protein 908 44.19 -1 1026916..1027440 + 174 189499908 - Cphamn1_0952 - transcriptional regulator, AsnC family 909 48.60 0 1027496..1029637 + 713 189499909 - Cphamn1_0953 - glutamine synthetase catalytic region 910 48.59 0 1029606..1029854 - 82 189499910 - Cphamn1_0954 - hypothetical protein 911 50.48 0 1029865..1030284 - 139 189499911 - Cphamn1_0955 - protein of unknown function UPF0047 912 56.08 +1 1030647..1032053 - 468 189499912 - Cphamn1_0956 - transposase IS4 family protein 913 47.62 0 1032182..1032685 + 167 189499913 - Cphamn1_0957 - hypothetical protein 914 50.19 0 1032712..1033494 + 260 189499914 - Cphamn1_0958 - putative transcriptional acitvator, Baf family 915 50.00 0 1033634..1034713 - 359 189499915 - Cphamn1_0959 - 3-dehydroquinate synthase 916 45.33 0 1034710..1035309 - 199 189499916 - Cphamn1_0960 - Shikimate kinase 917 54.96 +1 1035779..1037230 + 483 189499917 - Cphamn1_0962 - glycerol kinase 918 56.06 +1 1037220..1038548 - 442 189499918 - Cphamn1_0963 - MiaB-like tRNA modifying enzyme YliG 919 52.65 0 1038529..1039662 - 377 189499919 - Cphamn1_0964 - queuine tRNA-ribosyltransferase 920 46.27 0 1039770..1040279 + 169 189499920 - Cphamn1_0965 - NusG antitermination factor 921 51.71 0 1040307..1041329 + 340 189499921 - Cphamn1_0966 - NAD-dependent epimerase/dehydratase 922 48.48 0 1041564..1042289 - 241 189499922 - Cphamn1_0967 - putative transcriptional regulator 923 48.58 0 1042324..1043871 - 515 189499923 - Cphamn1_0968 - lysyl-tRNA synthetase 924 46.90 0 1043932..1044867 - 311 189499924 - Cphamn1_0969 - Squalene/phytoene synthase 925 47.39 0 1045072..1046373 + 433 189499925 - Cphamn1_0970 - GTP-binding proten HflX 926 48.68 0 1046363..1046779 + 138 189499926 - Cphamn1_0971 - protein of unknown function UPF0054 927 51.65 0 1047590..1048075 + 161 189499927 - Cphamn1_0973 - protein of unknown function DUF456 928 46.10 0 1048605..1049411 - 268 189499928 - Cphamn1_0974 - protein of unknown function DUF164 929 40.00 -2 1049717..1049896 - 59 189499929 - Cphamn1_0975 - ribosomal protein L33 930 51.48 0 1050144..1051394 + 416 189499930 - Cphamn1_0976 - diaminopimelate decarboxylase 931 48.30 0 1051483..1052364 - 293 189499931 - Cphamn1_0977 - 5,10-methylenetetrahydrofolate reductase 932 53.43 +1 1052450..1054618 + 722 189499932 - Cphamn1_0978 - ComEC/Rec2-related protein 933 51.89 0 1054615..1054878 + 87 189499933 - Cphamn1_0979 - hypothetical protein 934 51.82 0 1054875..1055204 + 109 189499934 - Cphamn1_0980 - Cupin 2 conserved barrel domain protein 935 47.72 0 1055205..1055489 - 94 189499935 - Cphamn1_0981 - hypothetical protein 936 51.31 0 1055508..1056041 - 177 189499936 - Cphamn1_0982 - NUDIX hydrolase 937 48.66 0 1056044..1057531 - 495 189499937 - Cphamn1_0983 - binding-protein-dependent transport systems inner membrane component 938 46.03 0 1057625..1058254 - 209 189499938 - Cphamn1_0984 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 939 47.79 0 1058256..1059251 - 331 189499939 - Cphamn1_0985 - ribose-phosphate pyrophosphokinase 940 48.76 0 1059387..1060475 + 362 189499940 - Cphamn1_0986 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 941 49.91 0 1060730..1063390 - 886 189499941 - Cphamn1_0987 - glycoside hydrolase 15-related 942 51.69 0 1063620..1063973 + 117 189499942 - Cphamn1_0988 - hypothetical protein 48.93 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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