version 1.0
Chlorobium phaeobacteroides BS1, complete genome - 1..2736403 2469 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 772 50.79 0 871724..872995 - 423 189499772 - Cphamn1_0810 - Three-deoxy-D-manno-octulosonic-acid transferase domain protein 773 47.79 0 874611..875108 + 165 189499773 - Cphamn1_0811 - hypothetical protein 774 51.07 0 875503..877278 + 591 189499774 - Cphamn1_0812 - DEAD/DEAH box helicase domain protein 775 53.33 +1 877387..878091 + 234 189499775 - Cphamn1_0813 - hypothetical protein 776 49.78 0 878118..878579 + 153 189499776 - Cphamn1_0814 - hypothetical protein 777 48.87 0 878855..880270 + 471 189499777 - Cphamn1_0815 - Endonuclease/exonuclease/phosphatase 778 53.49 +1 880304..881692 + 462 189499778 - Cphamn1_0816 - beta-lactamase domain protein 779 50.00 0 881714..882631 - 305 189499779 - Cphamn1_0817 - tyrosine recombinase XerD 780 52.16 0 882648..883991 - 447 189499780 - Cphamn1_0818 - sun protein 781 50.93 0 884203..885606 + 467 189499781 - Cphamn1_0819 - O-acetylhomoserine/O-acetylserine sulfhydrylase 782 53.26 +1 885691..886764 + 357 189499782 - Cphamn1_0820 - homoserine O-acetyltransferase 783 49.29 0 887110..887604 + 164 189499783 - Cphamn1_0821 - DNA-binding protein 784 48.43 0 887601..887759 + 52 189499784 - Cphamn1_0822 - type III restriction-modification system restriction subunit 785 47.33 0 887860..888345 - 161 189499785 - Cphamn1_0823 - hypothetical protein 786 49.44 0 888487..889467 - 326 189499786 - Cphamn1_0824 - sulfotransferase 787 51.87 0 889630..890913 - 427 189499787 - Cphamn1_0825 - seryl-tRNA synthetase 788 51.75 0 890934..891389 - 151 189499788 - Cphamn1_0826 - hypothetical protein 789 44.00 -1 891392..891541 - 49 189499789 - Cphamn1_0827 - hypothetical protein 790 50.55 0 891622..892353 - 243 189499790 - Cphamn1_0828 - short-chain dehydrogenase/reductase SDR 791 46.74 0 892653..893711 + 352 189499791 - Cphamn1_0829 - transposase IS4 family protein 792 45.02 0 893872..894162 + 96 189499792 - Cphamn1_0830 - cold-shock DNA-binding domain protein 793 48.07 0 894243..894914 - 223 189499793 - Cphamn1_0831 - DNA repair protein RadC 794 50.05 0 895274..896206 - 310 189499794 - Cphamn1_0832 - malate dehydrogenase, NAD-dependent 795 48.24 0 896356..896610 - 84 189499795 - Cphamn1_0833 - ribosomal protein L27 796 45.02 0 896650..896940 - 96 189499796 - Cphamn1_0834 - ribosomal protein L21 797 47.59 0 897097..897573 - 158 189499797 - Cphamn1_0835 - hypothetical protein 798 41.67 -1 897991..898170 + 59 189499798 - Cphamn1_0836 - hypothetical protein 799 49.22 0 898167..900803 + 878 189499799 - Cphamn1_0837 - DNA mismatch repair protein MutS 800 51.02 0 900886..902304 + 472 189499800 - Cphamn1_0838 - Radical SAM domain protein 801 46.19 0 902421..904178 - 585 189499801 - Cphamn1_0839 - ABC transporter-related protein 802 43.78 -1 904316..904717 + 133 189499802 - Cphamn1_0840 - transcriptional regulator, MerR family 803 49.64 0 904812..905915 - 367 189499803 - Cphamn1_0841 - bacteriochlorophyll A protein 804 50.37 0 906211..907824 + 537 189499804 - Cphamn1_0842 - apolipoprotein N-acyltransferase 805 47.95 0 907821..909017 - 398 189499805 - Cphamn1_0843 - sigma54 specific transcriptional regulator, Fis family 806 49.20 0 909062..909622 - 186 189499806 - Cphamn1_0844 - Sporulation domain protein 807 50.06 0 909724..910584 + 286 189499807 - Cphamn1_0845 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 808 50.46 0 911210..912073 - 287 189499808 - Cphamn1_0846 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 809 49.85 0 912089..913390 - 433 189499809 - Cphamn1_0847 - Xanthine/uracil/vitamin C permease 810 46.87 0 914179..914769 + 196 189499810 - Cphamn1_0848 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 811 51.11 0 914987..916432 - 481 189499811 - Cphamn1_0849 - prolyl-tRNA synthetase 812 48.18 0 916486..917226 - 246 189499812 - Cphamn1_0850 - hypothetical protein 813 51.12 0 917445..918338 + 297 189499813 - Cphamn1_0851 - protein-(glutamine-N5) methyltransferase, release factor-specific 814 48.35 0 918511..919569 + 352 189499814 - Cphamn1_0852 - heat-inducible transcription repressor HrcA 815 48.50 0 919623..920189 + 188 189499815 - Cphamn1_0853 - GrpE protein 816 50.93 0 920237..921424 + 395 189499816 - Cphamn1_0854 - chaperone protein DnaJ 817 45.89 0 921996..922616 - 206 189499817 - Cphamn1_0855 - Proto-chlorophyllide reductase 57 kD subunit 818 48.37 0 922739..922891 - 50 189499818 - Cphamn1_0856 - hypothetical protein 819 48.86 0 923073..924077 - 334 189499819 - Cphamn1_0857 - glyceraldehyde-3-phosphate dehydrogenase, type I 820 49.69 0 924155..925585 - 476 189499820 - Cphamn1_0858 - Mur ligase middle domain protein 821 51.78 0 925632..926948 - 438 189499821 - Cphamn1_0859 - major facilitator superfamily MFS_1 822 50.80 0 927045..927731 - 228 189499822 - Cphamn1_0860 - ABC transporter-related protein 823 51.04 0 927941..929194 - 417 189499823 - Cphamn1_0861 - gamma-glutamyl phosphate reductase 824 43.48 -1 929222..929428 - 68 189499824 - Cphamn1_0862 - hypothetical protein 825 46.25 0 929584..930915 + 443 189499825 - Cphamn1_0863 - outer membrane efflux protein 826 50.19 0 930912..931949 + 345 189499826 - Cphamn1_0864 - efflux transporter, RND family, MFP subunit 827 50.58 0 931961..935230 + 1089 189499827 - Cphamn1_0865 - heavy metal efflux pump, CzcA family 828 48.59 0 935901..936149 + 82 189499828 - Cphamn1_0866 - hypothetical protein 829 48.94 0 936192..936755 + 187 189499829 - Cphamn1_0867 - hypothetical protein 830 51.28 0 936830..937258 + 142 189499830 - Cphamn1_0868 - Cupin 2 conserved barrel domain protein 831 44.55 -1 937914..938234 + 106 189499831 - Cphamn1_0869 - protein of unknown function DUF891 832 50.46 0 938234..938560 + 108 189499832 - Cphamn1_0870 - transcriptional regulator, XRE family 833 49.00 0 939232..939531 + 99 189499833 - Cphamn1_0871 - DNA polymerase beta domain protein region 834 48.12 0 939518..939862 + 114 189499834 - Cphamn1_0872 - protein of unknown function DUF86 835 43.20 -1 940326..941207 + 293 189499835 - Cphamn1_0873 - hypothetical protein 836 44.59 -1 941209..942150 + 313 189499836 - Cphamn1_0874 - D12 class N6 adenine-specific DNA methyltransferase 837 51.88 0 942080..942559 - 159 189499837 - Cphamn1_0875 - hypothetical protein 838 47.77 0 943215..943505 + 96 189499838 - Cphamn1_0878 - transposase IS3/IS911 family protein 839 52.50 0 943529..944368 + 279 189499839 - Cphamn1_0879 - Integrase catalytic region 840 50.00 0 944505..945272 + 255 189499840 - Cphamn1_0880 - hypothetical protein 841 30.77 -2 946231..946932 + 233 189499841 - Cphamn1_0881 - hypothetical protein 842 33.63 -2 946952..948304 + 450 189499842 - Cphamn1_0882 - hypothetical protein 843 50.56 0 950128..954000 - 1290 189499843 - Cphamn1_0884 - hypothetical protein 844 40.62 -2 961144..961500 + 118 189499844 - Cphamn1_0888 - hypothetical protein 845 47.64 0 961533..962105 + 190 189499845 - Cphamn1_0889 - transcriptional regulator, XRE family 846 50.84 0 962239..963906 - 555 189499846 - Cphamn1_0890 - filamentation induced by cAMP protein Fic 847 46.05 0 964757..965047 - 96 189499847 - Cphamn1_0891 - transcriptional regulator, AbrB family 848 41.54 -1 965298..965492 + 64 189499848 - Cphamn1_0892 - hypothetical protein 849 48.58 0 965604..967649 + 681 189499849 - Cphamn1_0893 - Radical SAM domain protein 850 49.36 0 967723..968808 - 361 189499850 - Cphamn1_0894 - glutamate 5-kinase 851 47.98 0 969051..970313 - 420 189499851 - Cphamn1_0895 - sodium/hydrogen exchanger 852 42.91 -1 970408..970908 - 166 189499852 - Cphamn1_0896 - ferric uptake regulator, Fur family 853 46.70 0 970970..972607 - 545 189499853 - Cphamn1_0897 - MscS Mechanosensitive ion channel 854 48.21 0 973049..973606 + 185 189499854 - Cphamn1_0898 - peptide deformylase 855 51.68 0 973622..974575 + 317 189499855 - Cphamn1_0899 - methionyl-tRNA formyltransferase 856 49.12 0 974697..976514 + 605 189499856 - Cphamn1_0900 - GTP-binding protein LepA 857 51.70 0 976517..976663 + 48 189499857 - Cphamn1_0901 - hypothetical protein 858 47.71 0 976946..977773 + 275 189499858 - Cphamn1_0902 - signal peptidase I 859 48.58 0 977767..978225 - 152 189499859 - Cphamn1_0903 - hypothetical protein 860 49.40 0 978325..979818 + 497 189499860 - Cphamn1_0904 - anthranilate synthase component I 861 50.63 0 979894..981402 + 502 189499861 - Cphamn1_0905 - protease Do 862 45.34 0 981543..982025 + 160 189499862 - Cphamn1_0906 - transcription elongation factor GreA 863 45.78 0 982049..982273 + 74 189499863 - Cphamn1_0907 - hypothetical protein 864 51.39 0 982279..983031 + 250 189499864 - Cphamn1_0908 - Triose-phosphate isomerase 865 50.53 0 983175..984866 - 563 189499865 - Cphamn1_0909 - thiamine biosynthesis protein ThiC 866 49.79 0 985236..985478 + 80 189499866 - Cphamn1_0910 - Transglycosylase-associated protein 867 48.37 0 985605..986954 + 449 189499867 - Cphamn1_0911 - PUCC protein 868 54.07 +1 987256..988200 + 314 189499868 - Cphamn1_0912 - Radical SAM domain protein 869 40.20 -2 988380..988481 - 33 189499869 - Cphamn1_0913 - hypothetical protein 870 41.86 -1 988799..988927 + 42 189499870 - Cphamn1_0914 - hypothetical protein 871 42.31 -1 989829..989984 + 51 189499871 - Cphamn1_0915 - hypothetical protein 48.93 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0