version 1.0
Chlorobium phaeobacteroides BS1, complete genome - 1..2736403 2469 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 285 49.00 0 300524..302725 + 733 189499285 - Cphamn1_0305 - photosystem P840 reaction center, large subunit 286 53.93 +1 302827..303525 + 232 189499286 - Cphamn1_0306 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 287 44.58 -1 303613..304359 + 248 189499287 - Cphamn1_0307 - Dolichyl-phosphate beta-D-mannosyltransferase 288 49.23 0 304440..306521 - 693 189499288 - Cphamn1_0308 - small GTP-binding protein 289 50.76 0 306772..308085 + 437 189499289 - Cphamn1_0309 - Phosphopyruvate hydratase 290 46.46 0 308249..308545 + 98 189499290 - Cphamn1_0310 - Septum formation initiator 291 50.85 0 308651..310711 + 686 189499291 - Cphamn1_0311 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 292 49.87 0 310730..311515 + 261 189499292 - Cphamn1_0312 - short-chain dehydrogenase/reductase SDR 293 42.71 -1 312038..312229 + 63 189499293 - Cphamn1_0313 - preprotein translocase, SecE subunit 294 45.36 0 312254..312835 + 193 189499294 - Cphamn1_0314 - NusG antitermination factor 295 51.41 0 312878..313303 + 141 189499295 - Cphamn1_0315 - ribosomal protein L11 296 49.57 0 313377..314066 + 229 189499296 - Cphamn1_0316 - ribosomal protein L1 297 46.93 0 314084..314605 + 173 189499297 - Cphamn1_0317 - ribosomal protein L10 298 47.77 0 314674..315054 + 126 189499298 - Cphamn1_0318 - ribosomal protein L7/L12 299 48.84 0 315255..319163 + 1302 189499299 - Cphamn1_0319 - DNA-directed RNA polymerase, beta subunit 300 49.59 0 319234..323730 + 1498 189499300 - Cphamn1_0320 - DNA-directed RNA polymerase, beta' subunit 301 50.45 0 324080..325423 - 447 189499301 - Cphamn1_0321 - acetyl-CoA carboxylase, biotin carboxylase 302 47.68 0 325442..325915 - 157 189499302 - Cphamn1_0322 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 303 44.87 0 325966..326667 - 233 189499303 - Cphamn1_0323 - translation elongation factor P 304 49.08 0 326751..327023 + 90 189499304 - Cphamn1_0324 - histone family protein DNA-binding protein 305 47.92 0 327119..328126 + 335 189499305 - Cphamn1_0325 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 306 51.99 0 328308..329336 - 342 189499306 - Cphamn1_0326 - thiamine pyrophosphate protein domain protein TPP-binding 307 50.72 0 329340..331283 - 647 189499307 - Cphamn1_0327 - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein 308 46.67 0 331415..331684 - 89 189499308 - Cphamn1_0328 - hypothetical protein 309 47.23 0 331897..332565 - 222 189499309 - Cphamn1_0329 - hypothetical protein 310 54.00 +1 332767..335427 + 886 189499310 - Cphamn1_0330 - alanyl-tRNA synthetase 311 54.95 +1 335440..335934 + 164 189499311 - Cphamn1_0331 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 312 54.52 +1 336186..336992 - 268 189499312 - Cphamn1_0332 - short-chain dehydrogenase/reductase SDR 313 55.29 +1 337284..338927 + 547 189499313 - Cphamn1_0333 - N-6 DNA methylase 314 48.80 0 338924..340216 + 430 189499314 - Cphamn1_0334 - restriction modification system DNA specificity domain 315 44.59 -1 340213..341988 + 591 189499315 - Cphamn1_0335 - hypothetical protein 316 45.19 0 341981..343405 + 474 189499316 - Cphamn1_0336 - Piwi domain protein 317 54.16 +1 343420..347457 + 1345 189499317 - Cphamn1_0337 - type I site-specific deoxyribonuclease, HsdR family 318 51.78 0 347461..347769 + 102 189499318 - Cphamn1_0338 - protein of unknown function DUF45 319 60.92 +2 348205..348552 + 115 189499319 - Cphamn1_0339 - transcriptional regulator, XRE family 320 52.78 0 350412..351650 - 412 189499320 - Cphamn1_0341 - phosphoserine phosphatase SerB 321 52.94 0 351647..353191 - 514 189499321 - Cphamn1_0342 - GMP synthase, large subunit 322 50.24 0 353217..355541 - 774 189499322 - Cphamn1_0343 - penicillin-binding protein, 1A family 323 48.22 0 355538..356464 - 308 189499323 - Cphamn1_0344 - alpha/beta hydrolase fold 324 47.56 0 356872..357342 + 156 189499324 - Cphamn1_0345 - transcription activator effector binding 325 54.34 +1 357617..359101 + 494 189499325 - Cphamn1_0346 - amine oxidase 326 52.73 0 359303..360565 + 420 189499326 - Cphamn1_0347 - hypothetical protein 327 52.19 0 361058..361789 + 243 189499327 - Cphamn1_0349 - hypothetical protein 328 51.15 0 361810..362202 + 130 189499328 - Cphamn1_0350 - hypothetical protein 329 53.86 +1 362207..363034 + 275 189499329 - Cphamn1_0351 - dTDP-4-dehydrorhamnose reductase 330 56.22 +1 363131..363877 + 248 189499330 - Cphamn1_0352 - hypothetical protein 331 55.65 +1 363884..365254 + 456 189499331 - Cphamn1_0353 - cobyrinic acid a,c-diamide synthase 332 51.38 0 365322..365792 - 156 189499332 - Cphamn1_0354 - hypothetical protein 333 48.75 0 366156..368717 + 853 189499333 - Cphamn1_0355 - ATPase AAA-2 domain protein 334 53.74 +1 369040..370431 - 463 189499334 - Cphamn1_0356 - pyridoxal-phosphate dependent TrpB-like enzyme 335 55.08 +1 370824..371798 + 324 189499335 - Cphamn1_0357 - lipopolysaccharide heptosyltransferase II 336 51.40 0 371849..372916 - 355 189499336 - Cphamn1_0358 - thiamine-monophosphate kinase 337 47.83 0 372994..373938 + 314 189499337 - Cphamn1_0359 - signal recognition particle-docking protein FtsY 338 49.83 0 374291..374884 - 197 189499338 - Cphamn1_0360 - hypothetical protein 339 51.43 0 374949..375611 + 220 189499339 - Cphamn1_0361 - protein-L-isoaspartate O-methyltransferase 340 49.91 0 375704..377809 + 701 189499340 - Cphamn1_0362 - PpiC-type peptidyl-prolyl cis-trans isomerase 341 48.09 0 377815..379590 - 591 189499341 - Cphamn1_0363 - phosphoenolpyruvate-protein phosphotransferase 342 49.84 0 379663..381243 - 526 189499342 - Cphamn1_0364 - replicative DNA helicase 343 48.01 0 381295..381921 - 208 189499343 - Cphamn1_0365 - phage SPO1 DNA polymerase-related protein 344 48.29 0 382198..383427 - 409 189499344 - Cphamn1_0366 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 345 48.25 0 383584..388068 - 1494 189499345 - Cphamn1_0367 - hypothetical protein 346 49.90 0 388875..389363 - 162 189499346 - Cphamn1_0368 - rfaE bifunctional protein 347 46.75 0 389634..390542 + 302 189499347 - Cphamn1_0369 - lipid A biosynthesis acyltransferase 348 47.76 0 390748..391752 + 334 189499348 - Cphamn1_0370 - lipopolysaccharide biosynthesis protein 349 48.93 0 391883..393697 + 604 189499349 - Cphamn1_0371 - polysaccharide biosynthesis protein CapD 350 53.15 +1 393927..395324 - 465 189499350 - Cphamn1_0372 - hypothetical protein 351 48.01 0 395590..397374 + 594 189499351 - Cphamn1_0373 - ABC transporter-related protein 352 45.40 0 397408..398037 + 209 189499352 - Cphamn1_0374 - hypothetical protein 353 41.84 -1 398088..399239 + 383 189499353 - Cphamn1_0375 - glycosyl transferase group 1 354 36.94 -2 399302..399661 + 119 189499354 - Cphamn1_0376 - hypothetical protein 355 45.15 0 399861..400850 - 329 189499355 - Cphamn1_0377 - transposase IS4 family protein 356 42.41 -1 401520..402059 + 179 189499356 - Cphamn1_0379 - hypothetical protein 357 46.15 0 402174..403070 + 298 189499357 - Cphamn1_0380 - glycosyl transferase family 2 358 46.83 0 403122..404225 + 367 189499358 - Cphamn1_0381 - glycosyl transferase group 1 359 44.49 -1 404393..405772 + 459 189499359 - Cphamn1_0382 - hypothetical protein 360 49.73 0 405769..406890 + 373 189499360 - Cphamn1_0383 - glycosyl transferase group 1 361 49.75 0 406890..407498 + 202 189499361 - Cphamn1_0384 - sugar transferase 362 50.64 0 407505..409538 - 677 189499362 - Cphamn1_0385 - NAD-dependent epimerase/dehydratase 363 50.43 0 409799..410962 + 387 189499363 - Cphamn1_0386 - Glutamine--scyllo-inositol transaminase 364 46.09 0 411054..412958 + 634 189499364 - Cphamn1_0387 - ABC transporter-related protein 365 44.90 0 413006..413818 - 270 189499365 - Cphamn1_0388 - glycosyl transferase family 2 366 43.94 -1 415573..416298 - 241 189499366 - Cphamn1_0390 - glycosyl transferase family 2 367 40.46 -2 416277..417356 - 359 189499367 - Cphamn1_0391 - glycosyl transferase family 9 368 39.01 -2 417349..418545 - 398 189499368 - Cphamn1_0392 - O-antigen polymerase 369 47.92 0 418891..419829 + 312 189499369 - Cphamn1_0393 - Abortive infection protein 370 42.00 -1 420019..420168 - 49 189499370 - Cphamn1_0394 - hypothetical protein 371 46.88 0 420215..421048 + 277 189499371 - Cphamn1_0395 - phosphatidate cytidylyltransferase 372 46.92 0 421151..421621 + 156 189499372 - Cphamn1_0396 - putative PTS IIA-like nitrogen-regulatory protein PtsN 373 49.73 0 421919..423223 + 434 189499373 - Cphamn1_0397 - histidyl-tRNA synthetase 374 49.26 0 423292..423561 + 89 189499374 - Cphamn1_0398 - glutaredoxin 2 375 45.54 0 423748..423960 + 70 189499375 - Cphamn1_0399 - hypothetical protein 376 48.62 0 424099..424641 + 180 189499376 - Cphamn1_0400 - protein of unknown function DUF150 377 45.98 0 424695..426260 + 521 189499377 - Cphamn1_0401 - NusA antitermination factor 378 48.98 0 426304..429039 + 911 189499378 - Cphamn1_0402 - translation initiation factor IF-2 379 47.01 0 429132..429482 + 116 189499379 - Cphamn1_0403 - ribosome-binding factor A 380 46.75 0 429585..430307 + 240 189499380 - Cphamn1_0404 - tRNA pseudouridine synthase B 381 48.55 0 430315..431280 + 321 189499381 - Cphamn1_0405 - riboflavin biosynthesis protein RibF 382 42.22 -1 431327..431596 + 89 189499382 - Cphamn1_0406 - ribosomal protein S15 383 47.18 0 431686..432573 + 295 189499383 - Cphamn1_0407 - domain of unknown function DUF1732 384 45.49 0 432741..433316 + 191 189499384 - Cphamn1_0408 - Guanylate kinase 48.93 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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