version 1.0
Chlorobium phaeobacteroides BS1, complete genome - 1..2736403 2469 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1600 58.44 +2 1803294..1804241 - 315 189500600 - Cphamn1_1670 - ADP-ribosylation/Crystallin J1 1601 48.30 0 1804231..1807431 - 1066 189500601 - Cphamn1_1671 - helicase domain protein 1602 47.33 0 1807424..1809238 - 604 189500602 - Cphamn1_1672 - hypothetical protein 1603 47.40 0 1809232..1810461 - 409 189500603 - Cphamn1_1673 - hypothetical protein 1604 53.37 +1 1810462..1811499 - 345 189500604 - Cphamn1_1674 - restriction endonuclease 1605 55.51 +1 1811539..1813608 - 689 189500605 - Cphamn1_1675 - hypothetical protein 1606 60.86 +2 1813623..1816121 - 832 189500606 - Cphamn1_1676 - PglZ domain protein 1607 53.90 +1 1816134..1819649 - 1171 189500607 - Cphamn1_1677 - hypothetical protein 1608 46.86 0 1819654..1820178 - 174 189500608 - Cphamn1_1678 - hypothetical protein 1609 57.20 +2 1820175..1821230 - 351 189500609 - Cphamn1_1679 - hypothetical protein 1610 55.04 +1 1821227..1824838 - 1203 189500610 - Cphamn1_1680 - hypothetical protein 1611 51.27 0 1824853..1825443 - 196 189500611 - Cphamn1_1681 - Domain of unknown function DUF1788 1612 50.57 0 1825461..1826075 - 204 189500612 - Cphamn1_1682 - Protein of unkown function DUF1819 putative inner membrane 1613 52.31 0 1826082..1826276 - 64 189500613 - Cphamn1_1683 - DNA binding domain protein, excisionase family 1614 61.29 +2 1826395..1826952 - 185 189500614 - Cphamn1_1684 - AIG2 family protein 1615 62.91 +2 1826949..1827746 - 265 189500615 - Cphamn1_1685 - glucosamine 6-phosphate synthetase-like protein 1616 57.41 +2 1827731..1827892 - 53 189500616 - Cphamn1_1686 - hypothetical protein 1617 45.16 0 1828494..1828586 + 30 189500617 - Cphamn1_1687 - hypothetical protein 1618 49.11 0 1828598..1829161 - 187 189500618 - Cphamn1_1688 - protein of unknown function DUF179 1619 43.74 -1 1829165..1829635 - 156 189500619 - Cphamn1_1689 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1620 49.19 0 1829890..1830444 + 184 189500620 - Cphamn1_1690 - NUDIX hydrolase 1621 49.38 0 1830564..1830968 + 134 189500621 - Cphamn1_1691 - conserved hypothetical protein, possilbly involved in molybdenum cofactor biosynthesis 1622 46.20 0 1831030..1832241 - 403 189500622 - Cphamn1_1692 - MscS Mechanosensitive ion channel 1623 49.21 0 1832389..1834215 - 608 189500623 - Cphamn1_1693 - multi-sensor signal transduction histidine kinase 1624 48.80 0 1834202..1834912 - 236 189500624 - Cphamn1_1694 - two component transcriptional regulator, winged helix family 1625 50.05 0 1835180..1836148 - 322 189500625 - Cphamn1_1695 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1626 47.50 0 1836353..1839676 + 1107 189500626 - Cphamn1_1696 - transcription-repair coupling factor 1627 51.10 0 1840598..1841278 + 226 189500627 - Cphamn1_1698 - ferredoxin 1628 47.99 0 1841351..1842046 + 231 189500628 - Cphamn1_1699 - succinate dehydrogenase and fumarate reductase iron-sulfur protein 1629 49.22 0 1842109..1843329 + 406 189500629 - Cphamn1_1700 - alanine dehydrogenase/PNT domain protein 1630 46.89 0 1843356..1844867 - 503 189500630 - Cphamn1_1701 - amine oxidase 1631 40.88 -1 1845001..1845636 + 211 189500631 - Cphamn1_1702 - RNA polymerase, sigma-24 subunit, ECF subfamily 1632 45.18 0 1845665..1845892 + 75 189500632 - Cphamn1_1703 - putative transmembrane anti-sigma factor 1633 44.71 -1 1846070..1846447 + 125 189500633 - Cphamn1_1704 - transcriptional regulator, ArsR family 1634 61.24 +2 1846408..1846665 - 85 189500634 - Cphamn1_1705 - hypothetical protein 1635 44.11 -1 1847452..1847850 + 132 189500635 - Cphamn1_1706 - heat shock protein Hsp20 1636 47.85 0 1847927..1849855 + 642 189500636 - Cphamn1_1707 - chaperone protein DnaK 1637 42.39 -1 1849893..1850378 + 161 189500637 - Cphamn1_1708 - hypothetical protein 1638 48.13 0 1850552..1851355 - 267 189500638 - Cphamn1_1709 - tol-pal system protein YbgF 1639 47.59 0 1851414..1851890 - 158 189500639 - Cphamn1_1710 - peptidoglycan-associated lipoprotein 1640 47.04 0 1852499..1853833 - 444 189500640 - Cphamn1_1711 - WD40 domain protein beta Propeller 1641 52.55 0 1854003..1854845 - 280 189500641 - Cphamn1_1712 - hypothetical protein 1642 46.47 0 1854890..1855300 - 136 189500642 - Cphamn1_1713 - Biopolymer transport protein ExbD/TolR 1643 48.87 0 1855287..1855949 - 220 189500643 - Cphamn1_1714 - protein TolQ 1644 46.80 0 1855985..1857514 - 509 189500644 - Cphamn1_1715 - protein of unknown function DUF92 transmembrane 1645 53.22 +1 1858120..1859859 + 579 189500645 - Cphamn1_1716 - dihydroxy-acid dehydratase 1646 52.15 0 1859884..1861584 + 566 189500646 - Cphamn1_1717 - acetolactate synthase, large subunit, biosynthetic type 1647 47.71 0 1861593..1862072 + 159 189500647 - Cphamn1_1718 - acetolactate synthase, small subunit 1648 52.47 0 1862116..1863108 + 330 189500648 - Cphamn1_1719 - ketol-acid reductoisomerase 1649 52.45 0 1863119..1864180 + 353 189500649 - Cphamn1_1720 - 3-isopropylmalate dehydrogenase 1650 53.79 +1 1864198..1865766 + 522 189500650 - Cphamn1_1721 - 2-isopropylmalate synthase 1651 51.81 0 1865774..1867072 + 432 189500651 - Cphamn1_1722 - homoaconitate hydratase family protein 1652 51.06 0 1867117..1867680 + 187 189500652 - Cphamn1_1723 - aconitate hydratase domain protein 1653 51.24 0 1867716..1869329 + 537 189500653 - Cphamn1_1724 - 2-isopropylmalate synthase/homocitrate synthase family protein 1654 49.54 0 1869447..1870742 + 431 189500654 - Cphamn1_1725 - proteinase inhibitor I4 serpin 1655 50.00 0 1870781..1871338 + 185 189500655 - Cphamn1_1726 - Exonuclease RNase T and DNA polymerase III 1656 51.82 0 1871679..1872722 - 347 189500656 - Cphamn1_1727 - Agmatine deiminase 1657 48.00 0 1872728..1873975 - 415 189500657 - Cphamn1_1728 - Ste24 endopeptidase 1658 45.88 0 1874544..1874822 - 92 189500658 - Cphamn1_1729 - hypothetical protein 1659 49.66 0 1874883..1876052 - 389 189500659 - Cphamn1_1730 - Na+/Picotransporter 1660 52.76 0 1876099..1876968 - 289 189500660 - Cphamn1_1731 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1661 52.15 0 1876973..1877902 - 309 189500661 - Cphamn1_1732 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1662 50.62 0 1877899..1878945 - 348 189500662 - Cphamn1_1733 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1663 49.85 0 1878985..1879311 - 108 189500663 - Cphamn1_1734 - hypothetical protein 1664 51.46 0 1879557..1880312 + 251 189500664 - Cphamn1_1735 - imidazoleglycerol phosphate synthase, cyclase subunit 1665 54.17 +1 1880739..1881098 - 119 189500665 - Cphamn1_1736 - hypothetical protein 1666 53.53 +1 1881267..1881776 - 169 189500666 - Cphamn1_1737 - NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 1667 48.88 0 1882015..1882503 + 162 189500667 - Cphamn1_1738 - hypothetical protein 1668 55.23 +1 1882723..1883028 - 101 189500668 - Cphamn1_1739 - Rieske (2Fe-2S) domain protein 1669 47.14 0 1883083..1884147 - 354 189500669 - Cphamn1_1740 - magnesium and cobalt transport protein CorA 1670 54.03 +1 1884195..1885175 - 326 189500670 - Cphamn1_1741 - hypothetical protein 1671 52.04 0 1885739..1886716 - 325 189500671 - Cphamn1_1742 - Na+/Ca+ antiporter, CaCA family 1672 45.45 0 1887040..1887204 - 54 189500672 - Cphamn1_1743 - hypothetical protein 1673 55.41 +1 1887247..1887717 + 156 189500673 - Cphamn1_1744 - hypothetical protein 1674 52.38 0 1887733..1888740 + 335 189500674 - Cphamn1_1745 - adenosine deaminase 1675 48.75 0 1888755..1889273 + 172 189500675 - Cphamn1_1746 - hypoxanthine phosphoribosyltransferase 1676 50.87 0 1889571..1890722 + 383 189500676 - Cphamn1_1747 - pyruvate carboxyltransferase 1677 50.46 0 1890719..1892347 + 542 189500677 - Cphamn1_1748 - transcriptional regulator, NifA, Fis Family 1678 55.42 +1 1892584..1892832 - 82 189500678 - Cphamn1_1749 - hypothetical protein 1679 49.00 0 1892889..1893290 - 133 189500679 - Cphamn1_1750 - large conductance mechanosensitive channel protein 1680 50.91 0 1893816..1894640 + 274 189500680 - Cphamn1_1751 - nitrogenase iron protein 1681 48.74 0 1894659..1895015 + 118 189500681 - Cphamn1_1752 - nitrogen regulatory protein P-II 1682 49.74 0 1895015..1895392 + 125 189500682 - Cphamn1_1753 - nitrogen regulatory protein P-II 1683 48.92 0 1895417..1897039 + 540 189500683 - Cphamn1_1754 - nitrogenase molybdenum-iron protein alpha chain 1684 52.93 0 1897087..1898469 + 460 189500684 - Cphamn1_1755 - nitrogenase molybdenum-iron protein beta chain 1685 48.38 0 1898628..1899989 + 453 189500685 - Cphamn1_1756 - nitrogenase MoFe cofactor biosynthesis protein NifE 1686 49.13 0 1899986..1901359 + 457 189500686 - Cphamn1_1757 - Nitrogenase 1687 51.37 0 1901371..1902645 + 424 189500687 - Cphamn1_1758 - nitrogenase cofactor biosynthesis protein NifB 1688 50.00 0 1902796..1903107 + 103 189500688 - Cphamn1_1759 - ferredoxin, 2Fe-2S 1689 48.66 0 1903344..1905359 - 671 189500689 - Cphamn1_1760 - histidine kinase 1690 63.39 +2 1905484..1906521 - 345 189500690 - Cphamn1_1761 - hydrogenase expression/formation protein HypE 1691 61.50 +2 1906512..1907615 - 367 189500691 - Cphamn1_1762 - hydrogenase expression/formation protein HypD 1692 47.37 0 1907704..1907931 - 75 189500692 - Cphamn1_1763 - hydrogenase assembly chaperone hypC/hupF 1693 51.61 0 1908177..1910480 - 767 189500693 - Cphamn1_1764 - (NiFe) hydrogenase maturation protein HypF 1694 49.56 0 1910441..1911235 - 264 189500694 - Cphamn1_1765 - hydrogenase accessory protein HypB 1695 49.42 0 1911878..1912219 - 113 189500695 - Cphamn1_1766 - hydrogenase nickel insertion protein HypA 1696 49.05 0 1912276..1913325 + 349 189500696 - Cphamn1_1767 - aspartate carbamoyltransferase 1697 52.87 0 1913440..1914294 + 284 189500697 - Cphamn1_1768 - hypothetical protein 1698 47.71 0 1914569..1915639 + 356 189500698 - Cphamn1_1769 - hypothetical protein 1699 46.01 0 1915859..1916134 + 91 189500699 - Cphamn1_1770 - hypothetical protein 48.93 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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