version 1.0
Chlorobium phaeobacteroides BS1, complete genome - 1..2736403 2469 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1530 51.10 0 1724157..1725794 - 545 189500530 - Cphamn1_1598 - proton-translocating NADH-quinone oxidoreductase, chain M 1531 50.42 0 1725854..1728142 - 762 189500531 - Cphamn1_1599 - proton-translocating NADH-quinone oxidoreductase, chain L 1532 45.28 0 1728194..1728511 - 105 189500532 - Cphamn1_1600 - NADH-ubiquinone oxidoreductase chain 4L 1533 44.19 -1 1728519..1729043 - 174 189500533 - Cphamn1_1601 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1534 48.63 0 1729073..1729693 - 206 189500534 - Cphamn1_1602 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 1535 47.54 0 1729709..1730827 - 372 189500535 - Cphamn1_1603 - NADH dehydrogenase (quinone) 1536 49.79 0 1730824..1732026 - 400 189500536 - Cphamn1_1604 - NADH dehydrogenase (quinone) 1537 49.43 0 1732071..1732598 - 175 189500537 - Cphamn1_1605 - NADH (or F420H2) dehydrogenase, subunit C 1538 49.21 0 1732622..1733194 - 190 189500538 - Cphamn1_1606 - NADH-quinone oxidoreductase, B subunit 1539 48.25 0 1733221..1733649 - 142 189500539 - Cphamn1_1607 - NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1540 42.17 -1 1733857..1734105 - 82 189500540 - Cphamn1_1608 - hypothetical protein 1541 49.74 0 1734095..1734679 - 194 189500541 - Cphamn1_1609 - TPR repeat-containing protein 1542 43.76 -1 1735699..1736283 - 194 189500542 - Cphamn1_1611 - hypothetical protein 1543 49.04 0 1736685..1737206 + 173 189500543 - Cphamn1_1612 - histidine triad (HIT) protein 1544 51.39 0 1737502..1738437 + 311 189500544 - Cphamn1_1613 - Methyltransferase type 12 1545 52.09 0 1738641..1740341 + 566 189500545 - Cphamn1_1614 - sodium/hydrogen exchanger 1546 48.63 0 1740381..1741328 + 315 189500546 - Cphamn1_1615 - UspA domain protein 1547 52.21 0 1741443..1744133 + 896 189500547 - Cphamn1_1616 - ATPase, P-type (transporting), HAD superfamily, subfamily IC 1548 51.42 0 1744239..1745642 - 467 189500548 - Cphamn1_1617 - outer membrane efflux protein 1549 52.69 0 1745705..1747042 - 445 189500549 - Cphamn1_1618 - AAA ATPase central domain protein 1550 51.14 0 1747188..1747844 - 218 189500550 - Cphamn1_1619 - riboflavin synthase, alpha subunit 1551 46.11 0 1747851..1748351 - 166 189500551 - Cphamn1_1620 - Redoxin domain protein 1552 48.20 0 1748637..1749053 - 138 189500552 - Cphamn1_1621 - DoxX family protein 1553 48.20 0 1749217..1750218 - 333 189500553 - Cphamn1_1622 - Outer membrane protein (porin)-like protein 1554 51.61 0 1750663..1751778 - 371 189500554 - Cphamn1_1623 - riboflavin biosynthesis protein RibD 1555 49.33 0 1751797..1752321 - 174 189500555 - Cphamn1_1624 - CMP/dCMP deaminase zinc-binding 1556 46.69 0 1752411..1754057 + 548 189500556 - Cphamn1_1625 - protein of unknown function DUF814 1557 43.33 -1 1754073..1754432 + 119 189500557 - Cphamn1_1626 - thioesterase superfamily protein 1558 47.59 0 1754441..1755766 - 441 189500558 - Cphamn1_1627 - permease YjgP/YjgQ family protein 1559 51.13 0 1756027..1756380 - 117 189500559 - Cphamn1_1628 - preprotein translocase, SecG subunit 1560 47.43 0 1756632..1757234 + 200 189500560 - Cphamn1_1629 - Imidazoleglycerol-phosphate dehydratase 1561 46.98 0 1757499..1759073 - 524 189500561 - Cphamn1_1630 - RNA binding metal dependent phosphohydrolase 1562 43.56 -1 1759388..1759651 - 87 189500562 - Cphamn1_1631 - hypothetical protein 1563 45.02 0 1759659..1759949 - 96 189500563 - Cphamn1_1632 - hypothetical protein 1564 48.52 0 1759961..1762363 - 800 189500564 - Cphamn1_1633 - phenylalanyl-tRNA synthetase, beta subunit 1565 51.39 0 1763317..1764612 - 431 189500565 - Cphamn1_1634 - outer membrane efflux protein 1566 51.25 0 1764814..1767978 - 1054 189500566 - Cphamn1_1635 - acriflavin resistance protein 1567 49.40 0 1768093..1769256 - 387 189500567 - Cphamn1_1636 - efflux transporter, RND family, MFP subunit 1568 45.70 0 1769269..1769745 - 158 189500568 - Cphamn1_1637 - transcriptional regulator, MarR family 1569 49.40 0 1769867..1770283 - 138 189500569 - Cphamn1_1638 - NUDIX hydrolase 1570 46.22 0 1770501..1771478 + 325 189500570 - Cphamn1_1639 - Nucleotidyl transferase 1571 51.31 0 1771705..1772922 + 405 189500571 - Cphamn1_1640 - Methionine adenosyltransferase 1572 51.73 0 1772990..1774408 + 472 189500572 - Cphamn1_1641 - adenosylhomocysteinase 1573 50.00 0 1774741..1775394 + 217 189500573 - Cphamn1_1642 - Phosphoribosylanthranilate isomerase 1574 48.38 0 1775389..1776285 - 298 189500574 - Cphamn1_1643 - alpha/beta hydrolase fold 1575 47.82 0 1776557..1776991 + 144 189500575 - Cphamn1_1644 - protein tyrosine phosphatase 1576 52.10 0 1777782..1778282 - 166 189500576 - Cphamn1_1646 - Rubrerythrin 1577 49.25 0 1778358..1779161 - 267 189500577 - Cphamn1_1647 - putative adenylate/guanylate cyclase 1578 49.63 0 1779396..1779929 + 177 189500578 - Cphamn1_1648 - transcriptional regulator, MarR family 1579 51.14 0 1779886..1781199 + 437 189500579 - Cphamn1_1649 - lysine 2,3-aminomutase YodO family protein 1580 50.21 0 1781209..1782660 + 483 189500580 - Cphamn1_1650 - SSS sodium solute transporter superfamily 1581 49.82 0 1782666..1783502 + 278 189500581 - Cphamn1_1651 - GCN5-related N-acetyltransferase 1582 51.31 0 1783656..1784834 + 392 189500582 - Cphamn1_1652 - sodium/hydrogen exchanger 1583 46.67 0 1784915..1785154 - 79 189500583 - Cphamn1_1653 - hypothetical protein 1584 41.19 -1 1785467..1785784 + 105 189500584 - Cphamn1_1654 - hypothetical protein 1585 46.78 0 1785806..1787158 - 450 189500585 - Cphamn1_1655 - multi antimicrobial extrusion protein MatE 1586 48.72 0 1787407..1787640 + 77 189500586 - Cphamn1_1656 - hypothetical protein 1587 43.07 -1 1787585..1788046 - 153 189500587 - Cphamn1_1657 - DoxX family protein 1588 46.51 0 1788051..1788809 - 252 189500588 - Cphamn1_1658 - Rhodanese domain protein 1589 49.10 0 1789042..1789485 + 147 189500589 - Cphamn1_1659 - hypothetical protein 1590 51.65 0 1789691..1789963 + 90 189500590 - Cphamn1_1660 - hypothetical protein 1591 53.74 +1 1790186..1790920 - 244 189500591 - Cphamn1_1661 - protein of unknown function DUF45 1592 50.87 0 1790934..1792079 - 381 189500592 - Cphamn1_1662 - major facilitator superfamily MFS_1 1593 53.42 +1 1792158..1793576 - 472 189500593 - Cphamn1_1663 - type I secretion membrane fusion protein, HlyD family 1594 52.80 0 1793573..1795729 - 718 189500594 - Cphamn1_1664 - type I secretion system ATPase 1595 55.81 +1 1795768..1797186 - 472 189500595 - Cphamn1_1665 - type I secretion outer membrane protein, TolC family 1596 48.28 0 1797309..1801007 - 1232 189500596 - Cphamn1_1666 - von Willebrand factor type A 1597 52.15 0 1801729..1801914 + 61 189500597 - Cphamn1_1667 - hypothetical protein 1598 47.45 0 1802120..1802452 - 110 189500598 - Cphamn1_1668 - plasmid stabilization system 1599 46.59 0 1802449..1802727 - 92 189500599 - Cphamn1_1669 - prevent-host-death family protein 1600 58.44 +2 1803294..1804241 - 315 189500600 - Cphamn1_1670 - ADP-ribosylation/Crystallin J1 1601 48.30 0 1804231..1807431 - 1066 189500601 - Cphamn1_1671 - helicase domain protein 1602 47.33 0 1807424..1809238 - 604 189500602 - Cphamn1_1672 - hypothetical protein 1603 47.40 0 1809232..1810461 - 409 189500603 - Cphamn1_1673 - hypothetical protein 1604 53.37 +1 1810462..1811499 - 345 189500604 - Cphamn1_1674 - restriction endonuclease 1605 55.51 +1 1811539..1813608 - 689 189500605 - Cphamn1_1675 - hypothetical protein 1606 60.86 +2 1813623..1816121 - 832 189500606 - Cphamn1_1676 - PglZ domain protein 1607 53.90 +1 1816134..1819649 - 1171 189500607 - Cphamn1_1677 - hypothetical protein 1608 46.86 0 1819654..1820178 - 174 189500608 - Cphamn1_1678 - hypothetical protein 1609 57.20 +2 1820175..1821230 - 351 189500609 - Cphamn1_1679 - hypothetical protein 1610 55.04 +1 1821227..1824838 - 1203 189500610 - Cphamn1_1680 - hypothetical protein 1611 51.27 0 1824853..1825443 - 196 189500611 - Cphamn1_1681 - Domain of unknown function DUF1788 1612 50.57 0 1825461..1826075 - 204 189500612 - Cphamn1_1682 - Protein of unkown function DUF1819 putative inner membrane 1613 52.31 0 1826082..1826276 - 64 189500613 - Cphamn1_1683 - DNA binding domain protein, excisionase family 1614 61.29 +2 1826395..1826952 - 185 189500614 - Cphamn1_1684 - AIG2 family protein 1615 62.91 +2 1826949..1827746 - 265 189500615 - Cphamn1_1685 - glucosamine 6-phosphate synthetase-like protein 1616 57.41 +2 1827731..1827892 - 53 189500616 - Cphamn1_1686 - hypothetical protein 1617 45.16 0 1828494..1828586 + 30 189500617 - Cphamn1_1687 - hypothetical protein 1618 49.11 0 1828598..1829161 - 187 189500618 - Cphamn1_1688 - protein of unknown function DUF179 1619 43.74 -1 1829165..1829635 - 156 189500619 - Cphamn1_1689 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1620 49.19 0 1829890..1830444 + 184 189500620 - Cphamn1_1690 - NUDIX hydrolase 1621 49.38 0 1830564..1830968 + 134 189500621 - Cphamn1_1691 - conserved hypothetical protein, possilbly involved in molybdenum cofactor biosynthesis 1622 46.20 0 1831030..1832241 - 403 189500622 - Cphamn1_1692 - MscS Mechanosensitive ion channel 1623 49.21 0 1832389..1834215 - 608 189500623 - Cphamn1_1693 - multi-sensor signal transduction histidine kinase 1624 48.80 0 1834202..1834912 - 236 189500624 - Cphamn1_1694 - two component transcriptional regulator, winged helix family 1625 50.05 0 1835180..1836148 - 322 189500625 - Cphamn1_1695 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1626 47.50 0 1836353..1839676 + 1107 189500626 - Cphamn1_1696 - transcription-repair coupling factor 1627 51.10 0 1840598..1841278 + 226 189500627 - Cphamn1_1698 - ferredoxin 1628 47.99 0 1841351..1842046 + 231 189500628 - Cphamn1_1699 - succinate dehydrogenase and fumarate reductase iron-sulfur protein 1629 49.22 0 1842109..1843329 + 406 189500629 - Cphamn1_1700 - alanine dehydrogenase/PNT domain protein 48.93 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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