version 1.0
Chlorobium phaeobacteroides BS1, complete genome - 1..2736403 2469 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1312 50.14 0 1486560..1487267 + 235 189500312 - Cphamn1_1372 - NAD-dependent epimerase/dehydratase 1313 48.14 0 1487543..1488400 - 285 189500313 - Cphamn1_1373 - short-chain dehydrogenase/reductase SDR 1314 47.94 0 1488552..1489619 - 355 189500314 - Cphamn1_1374 - ferredoxin 1315 58.59 +2 1489729..1489926 - 65 189500315 - Cphamn1_1375 - hypothetical protein 1316 51.44 0 1490275..1493979 + 1234 189500316 - Cphamn1_1376 - 5-oxoprolinase (ATP-hydrolyzing) 1317 50.28 0 1493952..1494482 - 176 189500317 - Cphamn1_1377 - hypothetical protein 1318 48.73 0 1494711..1495301 + 196 189500318 - Cphamn1_1378 - protein of unknown function DUF218 1319 51.77 0 1495342..1496415 - 357 189500319 - Cphamn1_1379 - NmrA family protein 1320 51.67 0 1496633..1498579 + 648 189500320 - Cphamn1_1380 - Tetratricopeptide TPR_2 repeat protein 1321 49.03 0 1498602..1499735 + 377 189500321 - Cphamn1_1381 - Patatin 1322 56.51 +1 1499924..1501420 - 498 189500322 - Cphamn1_1382 - transposase, IS5 family, putative 1323 47.62 0 1501587..1501817 + 76 189500323 - Cphamn1_1383 - hypothetical protein 1324 51.16 0 1501804..1502796 + 330 189500324 - Cphamn1_1384 - Radical SAM domain protein 1325 51.04 0 1502793..1504046 + 417 189500325 - Cphamn1_1385 - Radical SAM domain protein 1326 53.51 +1 1504369..1505850 - 493 189500326 - Cphamn1_1387 - aminoacyl-histidine dipeptidase 1327 57.33 +2 1506057..1506281 + 74 189500327 - Cphamn1_1388 - hypothetical protein 1328 48.63 0 1506285..1506467 - 60 189500328 - Cphamn1_1389 - hypothetical protein 1329 45.40 0 1506530..1506703 - 57 189500329 - Cphamn1_1390 - hypothetical protein 1330 46.12 0 1506753..1507010 - 85 189500330 - Cphamn1_1391 - transcriptional regulator, ArsR family 1331 45.19 0 1507155..1507424 - 89 189500331 - Cphamn1_1392 - RNP-1 like RNA-binding protein 1332 44.02 -1 1507744..1509231 + 495 189500332 - Cphamn1_1393 - hypothetical protein 1333 56.39 +1 1509226..1509984 - 252 189500333 - Cphamn1_1394 - short-chain dehydrogenase/reductase SDR 1334 53.79 +1 1510082..1510516 - 144 189500334 - Cphamn1_1395 - hypothetical protein 1335 53.79 +1 1510575..1511918 - 447 189500335 - Cphamn1_1396 - Radical SAM domain protein 1336 54.80 +1 1511919..1512938 - 339 189500336 - Cphamn1_1397 - hypothetical protein 1337 52.27 0 1513158..1514852 - 564 189500337 - Cphamn1_1398 - AMP-dependent synthetase and ligase 1338 48.71 0 1514985..1516337 - 450 189500338 - Cphamn1_1399 - Xanthine/uracil/vitamin C permease 1339 46.82 0 1516478..1517404 - 308 189500339 - Cphamn1_1400 - Cache type 2 domain protein 1340 46.98 0 1517539..1517919 - 126 189500340 - Cphamn1_1401 - PilT protein domain protein 1341 43.96 -1 1517916..1518122 - 68 189500341 - Cphamn1_1402 - transcriptional regulator, AbrB family 1342 49.76 0 1518504..1519136 + 210 189500342 - Cphamn1_1403 - hypothetical protein 1343 47.97 0 1519465..1520769 + 434 189500343 - Cphamn1_1404 - radical SAM domain protein 1344 44.80 -1 1521044..1521985 + 313 189500344 - Cphamn1_1405 - 8-oxoguanine DNA glycosylase domain protein 1345 53.48 +1 1522008..1522841 + 277 189500345 - Cphamn1_1406 - peptidase M48 Ste24p 1346 53.15 +1 1523093..1523980 + 295 189500346 - Cphamn1_1407 - NmrA family protein 1347 54.02 +1 1524906..1527452 + 848 189500347 - Cphamn1_1408 - aminopeptidase N 1348 53.61 +1 1527516..1528373 + 285 189500348 - Cphamn1_1409 - hypothetical protein 1349 49.43 0 1528669..1529196 + 175 189500349 - Cphamn1_1410 - Flavodoxin-like protein 1350 54.77 +1 1529301..1530233 - 310 189500350 - Cphamn1_1411 - HpcH/HpaI aldolase 1351 43.07 -1 1530727..1531188 - 153 189500351 - Cphamn1_1412 - DNA mismatch endonuclease Vsr 1352 45.61 0 1531283..1532545 - 420 189500352 - Cphamn1_1413 - DNA-cytosine methyltransferase 1353 45.81 0 1532651..1534558 - 635 189500353 - Cphamn1_1414 - hypothetical protein 1354 46.11 0 1534573..1538220 - 1215 189500354 - Cphamn1_1415 - helicase domain protein 1355 47.96 0 1538213..1539949 - 578 189500355 - Cphamn1_1416 - NERD domain protein 1356 43.56 -1 1539937..1541559 - 540 189500356 - Cphamn1_1417 - hypothetical protein 1357 42.52 -1 1541562..1542530 - 322 189500357 - Cphamn1_1418 - hypothetical protein 1358 54.32 +1 1542990..1543937 - 315 189500358 - Cphamn1_1419 - protein of unknown function DUF477 1359 54.01 +1 1543934..1544581 - 215 189500359 - Cphamn1_1420 - protein of unknown function DUF477 1360 50.97 0 1544652..1545728 - 358 189500360 - Cphamn1_1421 - lysine 2,3-aminomutase YodO family protein 1361 56.69 +1 1545918..1546799 + 293 189500361 - Cphamn1_1422 - NmrA family protein 1362 54.40 +1 1546950..1547927 - 325 189500362 - Cphamn1_1423 - protein of unknown function DUF1568 1363 43.52 -1 1548158..1548736 - 192 189500363 - Cphamn1_1424 - hypothetical protein 1364 49.37 0 1548844..1549716 + 290 189500364 - Cphamn1_1425 - NAD-dependent epimerase/dehydratase 1365 50.56 0 1549700..1550059 - 119 189500365 - Cphamn1_1426 - hypothetical protein 1366 46.37 0 1550188..1551276 + 362 189500366 - Cphamn1_1427 - radical SAM enzyme, Cfr family 1367 42.45 -1 1551297..1552031 + 244 189500367 - Cphamn1_1428 - hypothetical protein 1368 47.34 0 1552052..1552708 + 218 189500368 - Cphamn1_1429 - Nucleoside-triphosphate--adenylate kinase 1369 49.86 0 1552773..1555211 + 812 189500369 - Cphamn1_1430 - primosomal protein N' 1370 56.51 +1 1555465..1556961 - 498 189500370 - Cphamn1_1432 - transposase, IS5 family, putative 1371 45.71 0 1557283..1557783 + 166 189500371 - Cphamn1_1433 - DoxX family protein 1372 45.99 0 1557994..1558815 + 273 189500372 - Cphamn1_1434 - hypothetical protein 1373 44.33 -1 1558941..1559549 - 202 189500373 - Cphamn1_1435 - outer surface protein, putative 1374 48.25 0 1559714..1560169 - 151 189500374 - Cphamn1_1436 - 3-dehydroquinate dehydratase, type II 1375 49.39 0 1560169..1560828 - 219 189500375 - Cphamn1_1437 - protein of unknown function UPF0005 1376 48.07 0 1561216..1562688 - 490 189500376 - Cphamn1_1438 - heat shock protein HslVU, ATPase subunit HslU 1377 51.00 0 1562773..1563321 - 182 189500377 - Cphamn1_1439 - 20S proteasome A and B subunits 1378 45.55 0 1563403..1564851 - 482 189500378 - Cphamn1_1440 - RNA polymerase, sigma 54 subunit, RpoN 1379 46.56 0 1564838..1565389 - 183 189500379 - Cphamn1_1441 - hypothetical protein 1380 48.38 0 1565679..1566575 + 298 189500380 - Cphamn1_1442 - Methenyltetrahydrofolate cyclohydrolase 1381 51.43 0 1566581..1567945 + 454 189500381 - Cphamn1_1443 - DNA repair protein RadA 1382 49.71 0 1568037..1568378 + 113 189500382 - Cphamn1_1444 - membrane protein of unknown function 1383 48.80 0 1568412..1569368 + 318 189500383 - Cphamn1_1445 - Alcohol dehydrogenase GroES domain protein 1384 50.29 0 1569373..1570917 + 514 189500384 - Cphamn1_1446 - ABC transporter-related protein 1385 51.43 0 1570930..1571946 + 338 189500385 - Cphamn1_1447 - inner-membrane translocator 1386 50.27 0 1571948..1573831 - 627 189500386 - Cphamn1_1448 - Chloride channel core 1387 31.92 -2 1573855..1574067 + 70 189500387 - Cphamn1_1449 - hypothetical protein 1388 45.64 0 1574132..1574326 + 64 189500388 - Cphamn1_1450 - hypothetical protein 1389 42.86 -1 1574401..1574568 + 55 189500389 - Cphamn1_1451 - hypothetical protein 1390 46.67 0 1574578..1575312 - 244 189500390 - Cphamn1_1452 - PASTA domain containing protein 1391 56.08 +1 1575421..1576827 + 468 189500391 - Cphamn1_1453 - transposase IS4 family protein 1392 45.85 0 1577135..1578109 - 324 189500392 - Cphamn1_1454 - Polyprenyl synthetase 1393 45.15 0 1579456..1580445 - 329 189500393 - Cphamn1_1456 - transposase IS4 family protein 1394 45.78 0 1580445..1580942 - 165 189500394 - Cphamn1_1457 - hypothetical protein 1395 50.51 0 1581691..1581987 - 98 189500395 - Cphamn1_1458 - NADP oxidoreductase, coenzyme F420-dependent 1396 45.67 0 1583166..1584032 + 288 189500396 - Cphamn1_1459 - Sec-independent protein translocase, TatC subunit 1397 48.62 0 1584021..1584674 - 217 189500397 - Cphamn1_1460 - dephospho-CoA kinase 1398 47.49 0 1584667..1585005 - 112 189500398 - Cphamn1_1461 - hypothetical protein 1399 49.83 0 1585197..1585802 + 201 189500399 - Cphamn1_1462 - Superoxide dismutase 1400 49.58 0 1586010..1586834 - 274 189500400 - Cphamn1_1463 - hypothetical protein 1401 49.37 0 1587007..1588191 + 394 189500401 - Cphamn1_1464 - hypothetical protein 1402 52.25 0 1588069..1588623 - 184 189500402 - Cphamn1_1465 - hypothetical protein 1403 48.53 0 1588929..1589507 - 192 189500403 - Cphamn1_1466 - hypothetical protein 1404 48.33 0 1589566..1590372 - 268 189500404 - Cphamn1_1467 - thioredoxin 1405 39.33 -2 1590424..1590573 - 49 189500405 - Cphamn1_1468 - hypothetical protein 1406 40.70 -1 1591325..1591840 + 171 189500406 - Cphamn1_1469 - hypothetical protein 1407 45.10 0 1591887..1592090 + 67 189500407 - Cphamn1_1470 - hypothetical protein 1408 48.46 0 1592106..1592462 + 118 189500408 - Cphamn1_1471 - hypothetical protein 1409 51.29 0 1592499..1594637 + 712 189500409 - Cphamn1_1472 - hypothetical protein 1410 50.77 0 1594703..1595350 + 215 189500410 - Cphamn1_1473 - hypothetical protein 1411 45.13 0 1595489..1596073 + 194 189500411 - Cphamn1_1474 - hypothetical protein 48.93 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0